Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS06950

Experiment: R2A with 3-octanone 5.3129 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.3129 mM
1,360,431	+				-0.2
1,360,431	+				+1.3
1,360,431	+				-1.3
1,360,432	-				+0.4
1,360,432	-				-0.1
1,360,480	-		ABIE40_RS06940	0.13	-0.3
1,360,513	-		ABIE40_RS06940	0.22	-2.9
1,360,521	+		ABIE40_RS06940	0.24	-1.7
1,360,521	+		ABIE40_RS06940	0.24	-0.0
1,360,522	-		ABIE40_RS06940	0.25	-0.6
1,360,522	-		ABIE40_RS06940	0.25	-1.2
1,360,605	+		ABIE40_RS06940	0.47	-0.9
1,360,606	-		ABIE40_RS06940	0.47	+0.4
1,360,660	-		ABIE40_RS06940	0.61	-0.2
1,360,755	+		ABIE40_RS06940	0.87	+0.5
1,360,756	-		ABIE40_RS06940	0.87	+1.0
1,360,756	-		ABIE40_RS06940	0.87	+0.4
1,360,756	-		ABIE40_RS06940	0.87	-1.1
1,360,756	-		ABIE40_RS06940	0.87	+0.4
1,360,756	-		ABIE40_RS06940	0.87	-0.3
1,360,756	-		ABIE40_RS06940	0.87	+0.2
1,360,756	-		ABIE40_RS06940	0.87	-1.2
1,360,756	-		ABIE40_RS06940	0.87	-2.7
1,360,758	+		ABIE40_RS06940	0.87	-0.3
1,360,759	-		ABIE40_RS06940	0.88	+0.5
1,360,759	-		ABIE40_RS06940	0.88	-1.4
1,360,832	-				-0.8
1,360,832	-				+0.1
1,360,832	-				+1.3
1,360,896	+				-1.5
1,360,926	+				+0.1
1,360,959	+		ABIE40_RS06945	0.18	-1.1
1,360,959	+		ABIE40_RS06945	0.18	+0.2
1,360,959	+		ABIE40_RS06945	0.18	+0.4
1,360,959	+		ABIE40_RS06945	0.18	-0.4
1,360,960	-		ABIE40_RS06945	0.18	+0.5
1,360,960	-		ABIE40_RS06945	0.18	+1.9
1,360,960	-		ABIE40_RS06945	0.18	-0.9
1,360,960	-		ABIE40_RS06945	0.18	+0.2
1,360,960	-		ABIE40_RS06945	0.18	+1.2
1,360,960	-		ABIE40_RS06945	0.18	+1.9
1,360,960	-		ABIE40_RS06945	0.18	+0.4
1,360,968	+		ABIE40_RS06945	0.20	-0.9
1,360,968	+		ABIE40_RS06945	0.20	+1.7
1,360,968	+		ABIE40_RS06945	0.20	-1.1
1,360,969	-		ABIE40_RS06945	0.21	+0.3
1,361,052	+		ABIE40_RS06945	0.44	-0.2
1,361,053	-		ABIE40_RS06945	0.44	+0.1
1,361,202	+		ABIE40_RS06945	0.86	-0.2
1,361,202	+		ABIE40_RS06945	0.86	+0.3
1,361,202	+		ABIE40_RS06945	0.86	-0.6
1,361,202	+		ABIE40_RS06945	0.86	+0.9
1,361,202	+		ABIE40_RS06945	0.86	+0.3
1,361,202	+		ABIE40_RS06945	0.86	+1.1
1,361,202	+		ABIE40_RS06945	0.86	+1.2
1,361,202	+		ABIE40_RS06945	0.86	-0.8
1,361,202	+		ABIE40_RS06945	0.86	+0.6
1,361,203	-		ABIE40_RS06945	0.86	-1.1
1,361,203	-		ABIE40_RS06945	0.86	+0.9
1,361,203	-		ABIE40_RS06945	0.86	-1.0
1,361,203	-		ABIE40_RS06945	0.86	+1.6
1,361,203	-		ABIE40_RS06945	0.86	+0.4
1,361,203	-		ABIE40_RS06945	0.86	-1.4
1,361,203	-		ABIE40_RS06945	0.86	+0.8
1,361,203	-		ABIE40_RS06945	0.86	+0.2
1,361,203	-		ABIE40_RS06945	0.86	-0.4
1,361,203	-		ABIE40_RS06945	0.86	-0.8
1,361,206	-		ABIE40_RS06945	0.87	+0.3
1,361,278	+				-0.3
1,361,278	+				-0.3
1,361,343	+				-0.1
1,361,344	-				-0.3
1,361,344	-				+2.1
1,361,344	-				-1.0
1,361,344	-				+0.2
1,361,484	+		ABIE40_RS06950	0.12	-1.6
1,361,484	+		ABIE40_RS06950	0.12	-0.1
1,361,484	+		ABIE40_RS06950	0.12	-1.6
1,361,484	+		ABIE40_RS06950	0.12	+1.5
1,361,485	-		ABIE40_RS06950	0.12	-1.9
1,361,485	-		ABIE40_RS06950	0.12	-0.5
1,361,485	-		ABIE40_RS06950	0.12	+0.5
1,361,869	+		ABIE40_RS06950	0.45	-0.0
1,361,869	+		ABIE40_RS06950	0.45	+1.5
1,361,869	+		ABIE40_RS06950	0.45	-1.2
1,361,869	+		ABIE40_RS06950	0.45	-1.4
1,361,869	+		ABIE40_RS06950	0.45	-1.7
1,361,869	+		ABIE40_RS06950	0.45	-0.8
1,361,870	-		ABIE40_RS06950	0.45	+1.9
1,361,870	-		ABIE40_RS06950	0.45	-0.1
1,361,870	-		ABIE40_RS06950	0.45	-2.1
1,361,870	-		ABIE40_RS06950	0.45	-0.9
1,361,870	-		ABIE40_RS06950	0.45	-0.1
1,361,871	+		ABIE40_RS06950	0.45	+0.5
1,361,872	-		ABIE40_RS06950	0.45	-1.0
1,361,872	-		ABIE40_RS06950	0.45	-0.4
1,361,902	+		ABIE40_RS06950	0.47	+1.1
1,361,903	-		ABIE40_RS06950	0.48	+1.5
1,362,098	-		ABIE40_RS06950	0.64	-1.1
1,362,099	+		ABIE40_RS06950	0.64	-2.3
1,362,099	+		ABIE40_RS06950	0.64	-2.1
1,362,100	-		ABIE40_RS06950	0.64	-0.3
1,362,100	-		ABIE40_RS06950	0.64	-0.9
1,362,130	+		ABIE40_RS06950	0.67	-2.4
1,362,130	+		ABIE40_RS06950	0.67	-0.8
1,362,130	+		ABIE40_RS06950	0.67	+0.7
1,362,130	+		ABIE40_RS06950	0.67	-0.3
1,362,131	-		ABIE40_RS06950	0.67	-0.3
1,362,131	-		ABIE40_RS06950	0.67	+0.0
1,362,238	-		ABIE40_RS06950	0.76	+0.5
1,362,349	+		ABIE40_RS06950	0.85	+0.3
1,362,349	+		ABIE40_RS06950	0.85	-0.9
1,362,349	+		ABIE40_RS06950	0.85	+0.4
1,362,349	+		ABIE40_RS06950	0.85	+0.1
1,362,349	+		ABIE40_RS06950	0.85	+0.9
1,362,349	+		ABIE40_RS06950	0.85	-0.8
1,362,350	-		ABIE40_RS06950	0.85	-0.1
1,362,350	-		ABIE40_RS06950	0.85	-1.9
1,362,350	-		ABIE40_RS06950	0.85	+0.4
1,362,350	-		ABIE40_RS06950	0.85	-0.6
1,362,350	-		ABIE40_RS06950	0.85	+0.3
1,362,350	-		ABIE40_RS06950	0.85	-0.6
1,362,350	-		ABIE40_RS06950	0.85	+0.4
1,362,350	-		ABIE40_RS06950	0.85	+0.8
1,362,350	-		ABIE40_RS06950	0.85	+1.5
1,362,350	-		ABIE40_RS06950	0.85	-1.4
1,362,424	+				+1.1
1,362,424	+				-0.2
1,362,424	+				+0.9
1,362,424	+				+0.4
1,362,424	+				+0.5
1,362,424	+				-0.4
1,362,424	+				+0.1
1,362,424	+				+0.1
1,362,424	+				-0.1
1,362,424	+				-1.1
1,362,424	+				-1.2
1,362,425	-				+0.1
1,362,425	-				-0.8
1,362,425	-				-1.2
1,362,425	-				+1.4
1,362,425	-				-0.2
1,362,425	-				-0.5
1,362,428	+				+0.2
1,362,428	+				+0.4
1,362,429	-				+0.1
1,362,429	-				+0.4
1,362,429	-				+0.5
1,362,493	+				+0.0
1,362,493	+				+0.9
1,362,493	+				-0.7
1,362,493	+				-0.6
1,362,493	+				+0.9
1,362,493	+				-0.3
1,362,493	+				+1.5
1,362,493	+				-0.6
1,362,493	+				-0.3
1,362,493	+				+0.4
1,362,494	-				+1.7
1,362,494	-				+0.4
1,362,494	-				-0.8
1,362,494	-				-2.1
1,362,494	-				-1.3
1,362,494	-				+1.9
1,362,494	-				+0.8
1,362,494	-				-0.4
1,362,494	-				-0.6
1,362,523	+				-0.5
1,362,523	+				-0.5
1,362,523	+				-1.5
1,362,523	+				+1.4
1,362,523	+				-0.8
1,362,523	+				+0.7
1,362,523	+				-1.1
1,362,523	+				-1.6
1,362,524	-				-0.1
1,362,524	-				-1.6
1,362,524	-				-0.9
1,362,524	-				+0.3
1,362,524	-				-1.8
1,362,524	-				-0.2
1,362,624	+				-0.1
1,362,624	+				+0.8
1,362,624	+				-0.6
1,362,624	+				+0.6
1,362,625	-				-0.8
1,362,625	-				+1.1
1,362,625	-				-0.5
1,362,625	-				-0.1
1,362,694	+				+1.3
1,362,815	-				-0.3
1,362,855	+		ABIE40_RS06955	0.14	-2.4
1,362,855	+		ABIE40_RS06955	0.14	-2.2
1,362,855	+		ABIE40_RS06955	0.14	+0.8
1,362,855	+		ABIE40_RS06955	0.14	-1.5
1,362,856	-		ABIE40_RS06955	0.15	+1.6
1,362,856	-		ABIE40_RS06955	0.15	+0.7
1,362,856	-		ABIE40_RS06955	0.15	-0.7
1,362,856	-		ABIE40_RS06955	0.15	-0.1
1,362,856	-		ABIE40_RS06955	0.15	+0.4
1,362,856	-		ABIE40_RS06955	0.15	+2.5
1,362,856	-		ABIE40_RS06955	0.15	+0.7
1,362,882	+		ABIE40_RS06955	0.21	-2.3
1,362,882	+		ABIE40_RS06955	0.21	+0.1
1,363,099	-		ABIE40_RS06955	0.79	+0.8
1,363,110	+		ABIE40_RS06955	0.82	-0.6
1,363,110	+		ABIE40_RS06955	0.82	-1.2
1,363,110	+		ABIE40_RS06955	0.82	-1.2
1,363,111	-		ABIE40_RS06955	0.82	+1.2
1,363,111	-		ABIE40_RS06955	0.82	+0.1
1,363,111	-		ABIE40_RS06955	0.82	-0.6
1,363,111	-		ABIE40_RS06955	0.82	+0.8
1,363,111	-		ABIE40_RS06955	0.82	-0.6
1,363,113	+		ABIE40_RS06955	0.83	+0.4
1,363,113	+		ABIE40_RS06955	0.83	-1.2
1,363,114	-		ABIE40_RS06955	0.83	-1.6
1,363,151	-				-0.4
1,363,176	+				-0.3
1,363,176	+				+1.4
1,363,176	+				-1.7
1,363,176	+				-2.6
1,363,177	-				+0.5
1,363,177	-				+0.1
1,363,177	-				-0.0
1,363,485	-				+0.1