Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS06580

Experiment: R2A with 3-octanone 5.3129 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.3129 mM
1,287,980	+		ABIE40_RS06575	0.59	-0.4
1,287,980	+		ABIE40_RS06575	0.59	-0.9
1,288,073	+		ABIE40_RS06575	0.64	+1.9
1,288,073	+		ABIE40_RS06575	0.64	-1.9
1,288,074	-		ABIE40_RS06575	0.64	-1.9
1,288,081	+		ABIE40_RS06575	0.64	+0.9
1,288,081	+		ABIE40_RS06575	0.64	-1.8
1,288,081	+		ABIE40_RS06575	0.64	+0.9
1,288,081	+		ABIE40_RS06575	0.64	+1.9
1,288,082	-		ABIE40_RS06575	0.64	-0.9
1,288,082	-		ABIE40_RS06575	0.64	-1.1
1,288,082	-		ABIE40_RS06575	0.64	-1.1
1,288,082	-		ABIE40_RS06575	0.64	-2.8
1,288,082	-		ABIE40_RS06575	0.64	-0.8
1,288,105	+		ABIE40_RS06575	0.65	+2.6
1,288,105	+		ABIE40_RS06575	0.65	+0.1
1,288,105	+		ABIE40_RS06575	0.65	+1.3
1,288,105	+		ABIE40_RS06575	0.65	+0.7
1,288,105	+		ABIE40_RS06575	0.65	-0.8
1,288,106	-		ABIE40_RS06575	0.65	-0.7
1,288,106	-		ABIE40_RS06575	0.65	-2.0
1,288,106	-		ABIE40_RS06575	0.65	-2.3
1,288,106	-		ABIE40_RS06575	0.65	-1.5
1,288,106	-		ABIE40_RS06575	0.65	-0.3
1,288,129	+		ABIE40_RS06575	0.66	-0.5
1,288,129	+		ABIE40_RS06575	0.66	-2.7
1,288,130	-		ABIE40_RS06575	0.66	+0.3
1,288,185	+		ABIE40_RS06575	0.69	-3.3
1,288,186	-		ABIE40_RS06575	0.69	-0.9
1,288,251	+		ABIE40_RS06575	0.72	-2.6
1,288,251	+		ABIE40_RS06575	0.72	-0.4
1,288,252	-		ABIE40_RS06575	0.72	-1.1
1,288,375	+		ABIE40_RS06575	0.77	+1.2
1,288,377	+		ABIE40_RS06575	0.77	-1.5
1,288,531	+		ABIE40_RS06575	0.84	-0.1
1,288,531	+		ABIE40_RS06575	0.84	-1.4
1,288,561	+		ABIE40_RS06575	0.86	-1.9
1,288,561	+		ABIE40_RS06575	0.86	-0.9
1,288,561	+		ABIE40_RS06575	0.86	-0.4
1,288,562	-		ABIE40_RS06575	0.86	-2.7
1,288,562	-		ABIE40_RS06575	0.86	-0.5
1,288,562	-		ABIE40_RS06575	0.86	-0.4
1,288,563	+		ABIE40_RS06575	0.86	+0.2
1,288,677	+				-2.2
1,288,677	+				-1.0
1,288,678	-				-3.2
1,288,678	-				-3.0
1,288,678	-				+0.3
1,288,700	-				+0.9
1,288,706	+				+1.5
1,288,774	+				-1.5
1,288,774	+				+0.9
1,288,775	-				-0.3
1,288,775	-				-0.1
1,288,873	+				+0.4
1,288,873	+				+0.2
1,288,873	+				-0.8
1,288,976	+				+1.2
1,288,976	+				-0.1
1,288,976	+				-0.4
1,288,976	+				-0.4
1,288,976	+				+0.0
1,288,976	+				-0.5
1,288,976	+				-0.4
1,288,976	+				-1.3
1,288,976	+				-0.6
1,288,976	+				+0.1
1,288,976	+				+1.1
1,288,977	-				+1.1
1,288,977	-				-2.9
1,288,977	-				-1.9
1,288,977	-				+0.7
1,288,977	-				+2.0
1,288,977	-				-0.6
1,288,977	-				-0.7
1,288,977	-				-1.1
1,288,977	-				-0.8
1,288,977	-				-0.3
1,288,977	-				-0.3
1,288,984	+				-0.5
1,288,984	+				-1.1
1,288,984	+				+0.9
1,288,984	+				+0.3
1,288,984	+				-1.1
1,288,984	+				+0.5
1,288,984	+				+1.5
1,288,984	+				+0.5
1,288,985	-				+2.2
1,288,985	-				-1.7
1,288,985	-				-0.3
1,288,985	-				-1.3
1,288,985	-				-0.3
1,288,985	-				-0.1
1,288,985	-				+1.5
1,288,985	-				+0.3
1,288,985	-				-0.3
1,289,147	+		ABIE40_RS06580	0.17	-1.5
1,289,147	+		ABIE40_RS06580	0.17	+0.1
1,289,147	+		ABIE40_RS06580	0.17	+1.1
1,289,147	+		ABIE40_RS06580	0.17	-0.4
1,289,147	+		ABIE40_RS06580	0.17	-1.1
1,289,147	+		ABIE40_RS06580	0.17	+1.3
1,289,147	+		ABIE40_RS06580	0.17	-1.6
1,289,147	+		ABIE40_RS06580	0.17	-1.5
1,289,148	-		ABIE40_RS06580	0.17	+0.0
1,289,148	-		ABIE40_RS06580	0.17	-0.7
1,289,148	-		ABIE40_RS06580	0.17	-2.3
1,289,148	-		ABIE40_RS06580	0.17	-0.5
1,289,148	-		ABIE40_RS06580	0.17	-0.7
1,289,148	-		ABIE40_RS06580	0.17	-1.4
1,289,148	-		ABIE40_RS06580	0.17	+0.8
1,289,148	-		ABIE40_RS06580	0.17	-1.1
1,289,148	-		ABIE40_RS06580	0.17	-0.6
1,289,215	+		ABIE40_RS06580	0.22	-2.2
1,289,216	-		ABIE40_RS06580	0.22	-2.5
1,289,216	-		ABIE40_RS06580	0.22	+0.9
1,289,308	+		ABIE40_RS06580	0.28	-0.6
1,289,414	+		ABIE40_RS06580	0.35	-0.1
1,289,443	+		ABIE40_RS06580	0.37	-2.0
1,289,443	+		ABIE40_RS06580	0.37	-0.0
1,289,444	-		ABIE40_RS06580	0.37	-0.1
1,289,444	-		ABIE40_RS06580	0.37	-2.3
1,289,510	+		ABIE40_RS06580	0.41	+0.8
1,289,510	+		ABIE40_RS06580	0.41	-1.6
1,289,510	+		ABIE40_RS06580	0.41	+1.0
1,289,510	+		ABIE40_RS06580	0.41	+0.5
1,289,510	+		ABIE40_RS06580	0.41	-2.1
1,289,510	+		ABIE40_RS06580	0.41	-0.2
1,289,511	-		ABIE40_RS06580	0.41	+0.3
1,289,511	-		ABIE40_RS06580	0.41	-0.7
1,289,511	-		ABIE40_RS06580	0.41	-0.4
1,289,511	-		ABIE40_RS06580	0.41	-1.0
1,289,511	-		ABIE40_RS06580	0.41	-0.4
1,289,568	-		ABIE40_RS06580	0.45	-2.3
1,289,591	+		ABIE40_RS06580	0.46	-0.9
1,289,592	-		ABIE40_RS06580	0.46	-1.1
1,289,653	+		ABIE40_RS06580	0.50	-2.0
1,289,654	-		ABIE40_RS06580	0.50	-2.3
1,289,789	+		ABIE40_RS06580	0.59	-0.1
1,289,789	+		ABIE40_RS06580	0.59	-1.1
1,289,789	+		ABIE40_RS06580	0.59	-0.1
1,289,790	-		ABIE40_RS06580	0.59	-1.6
1,289,790	-		ABIE40_RS06580	0.59	-2.7
1,289,790	-		ABIE40_RS06580	0.59	-0.7
1,289,790	-		ABIE40_RS06580	0.59	-0.8
1,289,790	-		ABIE40_RS06580	0.59	-0.7
1,289,795	+		ABIE40_RS06580	0.60	-1.0
1,290,107	+		ABIE40_RS06580	0.80	-1.2
1,290,107	+		ABIE40_RS06580	0.80	-0.4
1,290,107	+		ABIE40_RS06580	0.80	-2.1
1,290,107	+		ABIE40_RS06580	0.80	-0.2
1,290,107	+		ABIE40_RS06580	0.80	+0.1
1,290,107	+		ABIE40_RS06580	0.80	-0.2
1,290,107	+		ABIE40_RS06580	0.80	+0.0
1,290,108	-		ABIE40_RS06580	0.80	-0.8
1,290,108	-		ABIE40_RS06580	0.80	-1.1
1,290,108	-		ABIE40_RS06580	0.80	+0.6
1,290,108	-		ABIE40_RS06580	0.80	-1.6
1,290,111	-		ABIE40_RS06580	0.80	+0.6
1,290,111	-		ABIE40_RS06580	0.80	-2.0
1,290,222	-		ABIE40_RS06580	0.88	+0.4
1,290,222	-		ABIE40_RS06580	0.88	-0.5
1,290,321	-				+0.7
1,290,407	+				+0.5
1,290,408	-				-0.6
1,290,408	-				+0.6
1,290,520	+				-1.0
1,290,520	+				-0.1
1,290,520	+				-0.5
1,290,520	+				+0.1
1,290,520	+				-0.2
1,290,520	+				-1.4
1,290,520	+				-1.0
1,290,520	+				-0.8
1,290,520	+				-0.2
1,290,521	-				+1.2
1,290,521	-				-0.0
1,290,521	-				+0.5
1,290,521	-				-0.3
1,290,521	-				-0.3
1,290,521	-				-1.3
1,290,521	-				+0.4
1,290,521	-				-2.6
1,290,521	-				-0.6
1,290,521	-				+0.5
1,290,521	-				+0.5
1,290,521	-				-0.9
1,290,521	-				+1.1
1,290,600	+		ABIE40_RS06585	0.21	+0.0
1,290,601	-		ABIE40_RS06585	0.22	+0.2
1,290,630	+		ABIE40_RS06585	0.26	-0.8
1,290,772	-		ABIE40_RS06585	0.47	+0.2
1,290,779	-		ABIE40_RS06585	0.48	+0.1
1,290,792	+		ABIE40_RS06585	0.50	-0.8
1,290,792	+		ABIE40_RS06585	0.50	+0.0
1,290,793	-		ABIE40_RS06585	0.50	-1.5
1,290,793	-		ABIE40_RS06585	0.50	+0.5
1,290,921	+		ABIE40_RS06585	0.69	+0.2
1,290,921	+		ABIE40_RS06585	0.69	+0.1
1,290,921	+		ABIE40_RS06585	0.69	-0.5
1,290,921	+		ABIE40_RS06585	0.69	-0.3
1,290,922	-		ABIE40_RS06585	0.69	+0.3
1,290,922	-		ABIE40_RS06585	0.69	-0.6
1,291,036	+		ABIE40_RS06585	0.86	+1.6
1,291,037	-		ABIE40_RS06585	0.86	-0.1
1,291,119	+				+2.5
1,291,137	+				+0.1
1,291,137	+				-0.0
1,291,137	+				+0.5
1,291,138	-				-0.3
1,291,138	-				-1.0
1,291,139	+				-2.5
1,291,140	-				-0.0
1,291,140	-				+0.4
1,291,231	-				-0.1
1,291,245	+				-0.9
1,291,246	-				-0.1
1,291,316	+				-0.3
1,291,316	+				-0.2
1,291,316	+				-1.1
1,291,317	-				-2.6
1,291,317	-				-0.9
1,291,317	-				-1.0
1,291,356	-				+1.5
1,291,406	+		ABIE40_RS06590	0.15	-0.9