Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS18695

Experiment: R2A with 3-octanone 5.3129 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 3-octanone 5.3129 mM
3,740,567	-		ABIE40_RS18690	0.37	-0.9
3,740,567	-		ABIE40_RS18690	0.37	-0.5
3,740,567	-		ABIE40_RS18690	0.37	+0.6
3,740,567	-		ABIE40_RS18690	0.37	-0.8
3,740,598	-		ABIE40_RS18690	0.39	+0.1
3,740,659	+		ABIE40_RS18690	0.44	-1.1
3,740,659	+		ABIE40_RS18690	0.44	-0.1
3,740,660	-		ABIE40_RS18690	0.44	+0.5
3,740,660	-		ABIE40_RS18690	0.44	+0.1
3,740,660	-		ABIE40_RS18690	0.44	-0.7
3,740,661	+		ABIE40_RS18690	0.45	-0.4
3,740,661	+		ABIE40_RS18690	0.45	+0.1
3,740,662	-		ABIE40_RS18690	0.45	-0.3
3,740,662	-		ABIE40_RS18690	0.45	-0.1
3,740,662	-		ABIE40_RS18690	0.45	-0.4
3,740,662	-		ABIE40_RS18690	0.45	+0.6
3,740,662	-		ABIE40_RS18690	0.45	-1.8
3,740,824	+		ABIE40_RS18690	0.58	+0.0
3,740,825	-		ABIE40_RS18690	0.58	+0.2
3,740,856	+		ABIE40_RS18690	0.61	+0.3
3,741,345	+				-1.8
3,741,345	+				-0.6
3,741,345	+				-0.5
3,741,345	+				-1.5
3,741,345	+				-0.3
3,741,345	+				-1.1
3,741,345	+				+0.4
3,741,346	-				-1.2
3,741,346	-				-1.0
3,741,347	+				-2.4
3,741,347	+				-0.5
3,741,347	+				-1.9
3,741,347	+				+0.3
3,741,347	+				-0.7
3,741,348	-				+0.2
3,741,348	-				-1.5
3,741,348	-				-3.6
3,741,348	-				-3.0
3,741,348	-				-0.8
3,741,348	-				-0.1
3,741,348	-				+0.5
3,741,348	-				+2.0
3,741,349	+				+0.3
3,741,349	+				-0.8
3,741,350	-				+0.2
3,741,350	-				+0.2
3,741,350	-				-1.5
3,741,423	-				+0.8
3,741,448	+				-0.9
3,741,448	+				-2.8
3,741,449	-				-1.2
3,741,502	+				-1.1
3,741,502	+				+0.3
3,741,502	+				-1.6
3,741,502	+				-0.6
3,741,531	-				+1.0
3,741,579	+				-1.2
3,741,580	-				-3.2
3,741,580	-				-1.9
3,741,580	-				-3.4
3,741,580	-				-2.2
3,741,580	-				+0.7
3,741,611	+				-0.6
3,741,611	+				-0.7
3,741,611	+				+0.1
3,741,612	-				-1.3
3,741,612	-				-2.7
3,741,632	+		ABIE40_RS18695	0.13	-0.5
3,741,632	+		ABIE40_RS18695	0.13	-0.0
3,741,632	+		ABIE40_RS18695	0.13	-0.7
3,741,632	+		ABIE40_RS18695	0.13	-3.6
3,741,633	-		ABIE40_RS18695	0.13	-2.0
3,741,633	-		ABIE40_RS18695	0.13	+1.7
3,741,633	-		ABIE40_RS18695	0.13	-0.4
3,741,633	-		ABIE40_RS18695	0.13	+1.7
3,741,633	-		ABIE40_RS18695	0.13	-2.3
3,741,633	-		ABIE40_RS18695	0.13	-1.8
3,741,633	-		ABIE40_RS18695	0.13	-1.5
3,741,739	+		ABIE40_RS18695	0.32	-2.3
3,741,740	-		ABIE40_RS18695	0.32	-3.1
3,741,809	+		ABIE40_RS18695	0.44	-2.5
3,741,809	+		ABIE40_RS18695	0.44	-2.4
3,741,810	-		ABIE40_RS18695	0.44	-2.0
3,741,810	-		ABIE40_RS18695	0.44	-1.5
3,741,812	+		ABIE40_RS18695	0.45	+0.1
3,741,812	+		ABIE40_RS18695	0.45	-0.4
3,741,812	+		ABIE40_RS18695	0.45	-0.8
3,741,813	-		ABIE40_RS18695	0.45	-1.3
3,741,813	-		ABIE40_RS18695	0.45	-1.0
3,742,134	+				-1.0
3,742,134	+				-0.6
3,742,141	+				-0.3
3,742,142	-				-2.1
3,742,142	-				-0.7
3,742,244	+		ABIE40_RS18700	0.25	-0.4
3,742,244	+		ABIE40_RS18700	0.25	-0.8
3,742,244	+		ABIE40_RS18700	0.25	-2.6
3,742,244	+		ABIE40_RS18700	0.25	+1.1
3,742,244	+		ABIE40_RS18700	0.25	-3.1
3,742,245	-		ABIE40_RS18700	0.26	+0.3
3,742,245	-		ABIE40_RS18700	0.26	-1.4
3,742,245	-		ABIE40_RS18700	0.26	+0.7
3,742,245	-		ABIE40_RS18700	0.26	-1.1
3,742,245	-		ABIE40_RS18700	0.26	+0.2
3,742,350	+		ABIE40_RS18700	0.51	-1.3
3,742,351	-		ABIE40_RS18700	0.52	-0.3
3,742,351	-		ABIE40_RS18700	0.52	+0.1
3,742,351	-		ABIE40_RS18700	0.52	-2.4
3,742,442	+		ABIE40_RS18700	0.74	+0.1
3,742,442	+		ABIE40_RS18700	0.74	+0.2
3,742,442	+		ABIE40_RS18700	0.74	-1.2
3,742,442	+		ABIE40_RS18700	0.74	+1.9
3,742,442	+		ABIE40_RS18700	0.74	+1.9
3,742,443	-		ABIE40_RS18700	0.74	-1.8
3,742,443	-		ABIE40_RS18700	0.74	+0.1
3,742,443	-		ABIE40_RS18700	0.74	-1.0
3,742,443	-		ABIE40_RS18700	0.74	-0.8
3,742,464	+		ABIE40_RS18700	0.79	+0.1
3,742,499	+		ABIE40_RS18700	0.88	-1.2
3,742,499	+		ABIE40_RS18700	0.88	-1.0
3,742,504	+		ABIE40_RS18700	0.89	-1.9
3,742,555	+				+0.0
3,742,555	+				+0.7
3,742,555	+				+0.0
3,742,555	+				-0.3
3,742,555	+				+1.3
3,742,556	-				-1.7
3,742,556	-				-0.9
3,742,577	+				-0.6
3,742,577	+				+1.3
3,742,577	+				-2.8
3,742,578	-				-1.8
3,742,578	-				+0.8
3,742,586	-				-0.4
3,742,612	+				-0.5
3,742,613	-				+0.7
3,742,621	-				-0.4
3,742,621	-				-1.2
3,742,621	-				-1.1
3,742,621	-				-0.3
3,742,696	-				+0.4
3,742,696	-				+1.1
3,742,696	-				-0.1
3,742,696	-				-0.5
3,743,124	+		ABIE40_RS18710	0.14	-0.2
3,743,125	-		ABIE40_RS18710	0.14	-0.3
3,743,125	-		ABIE40_RS18710	0.14	-0.1
3,743,126	+		ABIE40_RS18710	0.14	+0.8
3,743,126	+		ABIE40_RS18710	0.14	+0.1
3,743,126	+		ABIE40_RS18710	0.14	+0.1
3,743,126	+		ABIE40_RS18710	0.14	+0.3
3,743,126	+		ABIE40_RS18710	0.14	-0.5
3,743,126	+		ABIE40_RS18710	0.14	-0.9
3,743,127	-		ABIE40_RS18710	0.14	+1.0
3,743,127	-		ABIE40_RS18710	0.14	-0.2
3,743,127	-		ABIE40_RS18710	0.14	+0.2
3,743,127	-		ABIE40_RS18710	0.14	-0.7
3,743,127	-		ABIE40_RS18710	0.14	+2.7
3,743,127	-		ABIE40_RS18710	0.14	+0.0
3,743,127	-		ABIE40_RS18710	0.14	-0.2
3,743,127	-		ABIE40_RS18710	0.14	+0.7
3,743,127	-		ABIE40_RS18710	0.14	+0.3
3,743,127	-		ABIE40_RS18710	0.14	+0.4
3,743,127	-		ABIE40_RS18710	0.14	-1.1
3,743,127	-		ABIE40_RS18710	0.14	+0.3
3,743,127	-		ABIE40_RS18710	0.14	+0.0
3,743,127	-		ABIE40_RS18710	0.14	+0.3