Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS17615

Experiment: R2A with 1-octen-3-ol 0.904549 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 0.904549 mM
3,516,946	+		ABIE40_RS17605	0.41	-2.4
3,516,947	-		ABIE40_RS17605	0.41	+0.8
3,516,947	-		ABIE40_RS17605	0.41	-0.2
3,516,947	-		ABIE40_RS17605	0.41	-0.5
3,516,947	-		ABIE40_RS17605	0.41	-0.9
3,516,995	+		ABIE40_RS17605	0.47	+0.9
3,516,996	-		ABIE40_RS17605	0.47	-0.8
3,516,996	-		ABIE40_RS17605	0.47	+2.0
3,517,151	+		ABIE40_RS17605	0.67	+0.9
3,517,151	+		ABIE40_RS17605	0.67	+0.7
3,517,151	+		ABIE40_RS17605	0.67	+1.4
3,517,151	+		ABIE40_RS17605	0.67	+0.6
3,517,152	-		ABIE40_RS17605	0.67	-0.1
3,517,462	+		ABIE40_RS17610	0.14	+0.1
3,517,463	-		ABIE40_RS17610	0.14	+0.7
3,517,463	-		ABIE40_RS17610	0.14	-1.1
3,517,463	-		ABIE40_RS17610	0.14	+0.4
3,517,463	-		ABIE40_RS17610	0.14	+0.1
3,517,466	+		ABIE40_RS17610	0.15	-1.0
3,517,466	+		ABIE40_RS17610	0.15	-0.5
3,517,466	+		ABIE40_RS17610	0.15	-0.8
3,517,466	+		ABIE40_RS17610	0.15	+0.5
3,517,466	+		ABIE40_RS17610	0.15	+0.3
3,517,467	-		ABIE40_RS17610	0.15	-3.1
3,517,467	-		ABIE40_RS17610	0.15	+0.1
3,517,467	-		ABIE40_RS17610	0.15	-0.4
3,517,467	-		ABIE40_RS17610	0.15	-1.0
3,517,467	-		ABIE40_RS17610	0.15	-0.2
3,517,519	+		ABIE40_RS17610	0.28	+0.5
3,517,519	+		ABIE40_RS17610	0.28	+0.3
3,517,519	+		ABIE40_RS17610	0.28	+0.8
3,517,519	+		ABIE40_RS17610	0.28	-0.6
3,517,519	+		ABIE40_RS17610	0.28	+0.1
3,517,519	+		ABIE40_RS17610	0.28	+0.5
3,517,519	+		ABIE40_RS17610	0.28	+2.2
3,517,519	+		ABIE40_RS17610	0.28	-2.6
3,517,519	+		ABIE40_RS17610	0.28	-0.7
3,517,520	-		ABIE40_RS17610	0.28	+0.4
3,517,520	-		ABIE40_RS17610	0.28	-1.7
3,517,520	-		ABIE40_RS17610	0.28	+0.8
3,517,520	-		ABIE40_RS17610	0.28	+0.1
3,517,520	-		ABIE40_RS17610	0.28	-0.3
3,517,520	-		ABIE40_RS17610	0.28	-0.3
3,517,520	-		ABIE40_RS17610	0.28	+0.2
3,517,520	-		ABIE40_RS17610	0.28	-1.4
3,517,520	-		ABIE40_RS17610	0.28	-0.8
3,517,522	+		ABIE40_RS17610	0.28	+0.6
3,517,522	+		ABIE40_RS17610	0.28	+0.4
3,517,523	-		ABIE40_RS17610	0.29	+0.0
3,517,588	+		ABIE40_RS17610	0.44	-0.2
3,517,588	+		ABIE40_RS17610	0.44	-1.2
3,517,588	+		ABIE40_RS17610	0.44	+0.0
3,517,589	-		ABIE40_RS17610	0.44	+0.3
3,517,589	-		ABIE40_RS17610	0.44	+0.1
3,517,591	+		ABIE40_RS17610	0.45	+0.8
3,517,591	+		ABIE40_RS17610	0.45	+0.9
3,517,592	-		ABIE40_RS17610	0.45	-0.1
3,517,827	-				-0.5
3,517,991	+		ABIE40_RS17615	0.19	-0.3
3,517,991	+		ABIE40_RS17615	0.19	-1.0
3,518,037	-		ABIE40_RS17615	0.24	-0.7
3,518,037	-		ABIE40_RS17615	0.24	-0.2
3,518,049	-		ABIE40_RS17615	0.25	+0.2
3,518,049	-		ABIE40_RS17615	0.25	-1.2
3,518,139	+		ABIE40_RS17615	0.35	+1.1
3,518,283	-		ABIE40_RS17615	0.51	-2.0
3,518,283	-		ABIE40_RS17615	0.51	+0.2
3,518,283	-		ABIE40_RS17615	0.51	-0.1
3,518,363	+		ABIE40_RS17615	0.60	+0.1
3,518,363	+		ABIE40_RS17615	0.60	+1.1
3,518,363	+		ABIE40_RS17615	0.60	-2.8
3,518,364	-		ABIE40_RS17615	0.60	+0.3
3,518,364	-		ABIE40_RS17615	0.60	-1.2
3,518,427	-		ABIE40_RS17615	0.67	-0.5
3,518,478	-		ABIE40_RS17615	0.73	+0.4
3,518,490	-		ABIE40_RS17615	0.74	+0.7
3,518,590	-		ABIE40_RS17615	0.86	+1.1
3,518,762	+				-0.8
3,518,763	-				+0.0
3,518,763	-				-1.5
3,518,805	+				-0.6
3,518,805	+				-1.5
3,518,813	+				+0.5
3,518,813	+				+1.1
3,518,814	-				+0.4
3,518,825	+				-2.3
3,518,825	+				-0.5
3,518,825	+				+0.7
3,518,825	+				+2.1
3,518,826	-				-1.5
3,518,826	-				-0.2
3,518,826	-				-1.5
3,518,826	-				-0.9
3,518,827	+		ABIE40_RS17620	0.10	+0.7
3,518,827	+		ABIE40_RS17620	0.10	+0.6
3,518,827	+		ABIE40_RS17620	0.10	+0.0
3,518,827	+		ABIE40_RS17620	0.10	-1.9
3,518,827	+		ABIE40_RS17620	0.10	-3.0
3,518,827	+		ABIE40_RS17620	0.10	+1.8
3,518,828	-		ABIE40_RS17620	0.10	-1.7
3,518,828	-		ABIE40_RS17620	0.10	-1.0
3,518,828	-		ABIE40_RS17620	0.10	-0.3
3,518,828	-		ABIE40_RS17620	0.10	-0.8
3,518,828	-		ABIE40_RS17620	0.10	-2.0
3,518,885	+		ABIE40_RS17620	0.18	+0.2
3,518,885	+		ABIE40_RS17620	0.18	-2.1
3,518,886	-		ABIE40_RS17620	0.18	-1.2
3,518,886	-		ABIE40_RS17620	0.18	-1.5
3,518,912	+		ABIE40_RS17620	0.21	-1.2
3,519,032	+		ABIE40_RS17620	0.36	+0.4
3,519,032	+		ABIE40_RS17620	0.36	-0.6
3,519,033	-		ABIE40_RS17620	0.37	-0.6
3,519,033	-		ABIE40_RS17620	0.37	+2.1
3,519,033	-		ABIE40_RS17620	0.37	+0.5
3,519,063	+		ABIE40_RS17620	0.40	-2.9
3,519,111	+		ABIE40_RS17620	0.47	+1.2
3,519,181	-		ABIE40_RS17620	0.56	-0.2
3,519,181	-		ABIE40_RS17620	0.56	-2.0
3,519,195	-		ABIE40_RS17620	0.57	-0.1
3,519,196	+		ABIE40_RS17620	0.58	-0.6
3,519,206	+		ABIE40_RS17620	0.59	-0.5
3,519,206	+		ABIE40_RS17620	0.59	-0.5
3,519,206	+		ABIE40_RS17620	0.59	+0.4
3,519,207	-		ABIE40_RS17620	0.59	-4.0
3,519,233	+		ABIE40_RS17620	0.62	-1.4
3,519,233	+		ABIE40_RS17620	0.62	-0.5
3,519,233	+		ABIE40_RS17620	0.62	-0.8
3,519,233	+		ABIE40_RS17620	0.62	-1.1
3,519,234	-		ABIE40_RS17620	0.62	+2.0
3,519,234	-		ABIE40_RS17620	0.62	-2.8
3,519,234	-		ABIE40_RS17620	0.62	-0.0
3,519,234	-		ABIE40_RS17620	0.62	+0.5
3,519,234	-		ABIE40_RS17620	0.62	+0.6
3,519,234	-		ABIE40_RS17620	0.62	-0.6
3,519,234	-		ABIE40_RS17620	0.62	+1.9
3,519,234	-		ABIE40_RS17620	0.62	+0.1
3,519,236	+		ABIE40_RS17620	0.63	-1.1
3,519,236	+		ABIE40_RS17620	0.63	-0.8
3,519,237	-		ABIE40_RS17620	0.63	-1.3
3,519,237	-		ABIE40_RS17620	0.63	+0.5
3,519,242	+		ABIE40_RS17620	0.63	+0.2
3,519,242	+		ABIE40_RS17620	0.63	-0.1
3,519,242	+		ABIE40_RS17620	0.63	-0.5
3,519,242	+		ABIE40_RS17620	0.63	-0.7
3,519,242	+		ABIE40_RS17620	0.63	-1.5
3,519,243	-		ABIE40_RS17620	0.64	-1.9
3,519,243	-		ABIE40_RS17620	0.64	-0.5
3,519,243	-		ABIE40_RS17620	0.64	+1.4
3,519,243	-		ABIE40_RS17620	0.64	+1.1
3,519,243	-		ABIE40_RS17620	0.64	+0.9
3,519,243	-		ABIE40_RS17620	0.64	+0.1
3,519,243	-		ABIE40_RS17620	0.64	-1.0
3,519,245	+		ABIE40_RS17620	0.64	-0.4
3,519,359	+		ABIE40_RS17620	0.79	-1.1
3,519,359	+		ABIE40_RS17620	0.79	-1.5
3,519,359	+		ABIE40_RS17620	0.79	-0.9
3,519,359	+		ABIE40_RS17620	0.79	+0.5
3,519,530	+				+1.0
3,519,530	+				+0.4
3,519,530	+				-0.7
3,519,530	+				+0.1
3,519,530	+				-0.8
3,519,531	-				-0.5
3,519,531	-				+1.1
3,519,531	-				-0.7
3,519,531	-				-1.8
3,519,531	-				-1.8
3,519,531	-				-0.3
3,519,531	-				+0.6
3,519,572	+				-1.8
3,519,572	+				-1.1
3,519,572	+				+0.4
3,519,572	+				-0.9
3,519,572	+				+1.0
3,519,573	-				-0.9
3,519,573	-				+0.0
3,519,573	-				-0.3
3,519,573	-				-0.8
3,519,573	-				+0.0
3,519,573	-				+0.4
3,519,574	+				+3.4
3,519,574	+				-0.6
3,519,574	+				-1.0
3,519,574	+				-1.0
3,519,574	+				-0.2
3,519,575	-				-0.1