Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS16700

Experiment: R2A with 1-octen-3-ol 0.904549 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 0.904549 mM
3,326,594	+		ABIE40_RS16690	0.87	+0.8
3,326,594	+		ABIE40_RS16690	0.87	+0.5
3,326,594	+		ABIE40_RS16690	0.87	+0.1
3,326,594	+		ABIE40_RS16690	0.87	-0.5
3,326,594	+		ABIE40_RS16690	0.87	-1.2
3,326,595	-		ABIE40_RS16690	0.87	-0.9
3,326,595	-		ABIE40_RS16690	0.87	+0.8
3,326,595	-		ABIE40_RS16690	0.87	-2.4
3,326,595	-		ABIE40_RS16690	0.87	+0.4
3,326,595	-		ABIE40_RS16690	0.87	+0.3
3,326,619	-				-1.0
3,326,628	-				+1.2
3,326,675	+				-2.4
3,326,800	-				+0.8
3,327,075	-		ABIE40_RS16695	0.41	-0.6
3,327,075	-		ABIE40_RS16695	0.41	+1.2
3,327,080	+		ABIE40_RS16695	0.42	-0.8
3,327,080	+		ABIE40_RS16695	0.42	+0.2
3,327,081	-		ABIE40_RS16695	0.42	-1.1
3,327,081	-		ABIE40_RS16695	0.42	+0.4
3,327,081	-		ABIE40_RS16695	0.42	-1.0
3,327,081	-		ABIE40_RS16695	0.42	-0.2
3,327,083	+		ABIE40_RS16695	0.43	+0.5
3,327,083	+		ABIE40_RS16695	0.43	-0.6
3,327,083	+		ABIE40_RS16695	0.43	-0.4
3,327,083	+		ABIE40_RS16695	0.43	-0.3
3,327,083	+		ABIE40_RS16695	0.43	-0.6
3,327,083	+		ABIE40_RS16695	0.43	-0.1
3,327,083	+		ABIE40_RS16695	0.43	+0.9
3,327,084	-		ABIE40_RS16695	0.43	-1.8
3,327,084	-		ABIE40_RS16695	0.43	+0.3
3,327,084	-		ABIE40_RS16695	0.43	-0.6
3,327,084	-		ABIE40_RS16695	0.43	-0.5
3,327,084	-		ABIE40_RS16695	0.43	+1.5
3,327,121	-		ABIE40_RS16695	0.48	-1.4
3,327,121	-		ABIE40_RS16695	0.48	-0.4
3,327,149	+		ABIE40_RS16695	0.53	-0.4
3,327,150	-		ABIE40_RS16695	0.53	-0.2
3,327,233	+		ABIE40_RS16695	0.66	+0.2
3,327,233	+		ABIE40_RS16695	0.66	-1.0
3,327,234	-		ABIE40_RS16695	0.66	-0.8
3,327,234	-		ABIE40_RS16695	0.66	+0.7
3,327,234	-		ABIE40_RS16695	0.66	+1.5
3,327,234	-		ABIE40_RS16695	0.66	-0.4
3,327,248	+		ABIE40_RS16695	0.68	-1.6
3,327,249	-		ABIE40_RS16695	0.68	-1.8
3,327,250	+		ABIE40_RS16695	0.69	+1.0
3,327,250	+		ABIE40_RS16695	0.69	+0.4
3,327,250	+		ABIE40_RS16695	0.69	+0.4
3,327,250	+		ABIE40_RS16695	0.69	+0.6
3,327,250	+		ABIE40_RS16695	0.69	-0.2
3,327,251	-		ABIE40_RS16695	0.69	+1.8
3,327,251	-		ABIE40_RS16695	0.69	-1.9
3,327,251	-		ABIE40_RS16695	0.69	+2.8
3,327,251	-		ABIE40_RS16695	0.69	-0.4
3,327,251	-		ABIE40_RS16695	0.69	-2.5
3,327,469	-				-0.8
3,327,517	+				+0.4
3,327,517	+				-1.1
3,327,517	+				+0.2
3,327,518	-				-0.4
3,327,518	-				-0.6
3,327,518	-				-0.3
3,327,518	-				+1.8
3,327,598	+		ABIE40_RS16700	0.14	+0.2
3,327,598	+		ABIE40_RS16700	0.14	-0.6
3,327,598	+		ABIE40_RS16700	0.14	+0.2
3,327,607	+		ABIE40_RS16700	0.15	-0.6
3,327,608	-		ABIE40_RS16700	0.15	-0.7
3,327,608	-		ABIE40_RS16700	0.15	-1.7
3,327,608	-		ABIE40_RS16700	0.15	-0.6
3,327,608	-		ABIE40_RS16700	0.15	+0.2
3,327,625	+		ABIE40_RS16700	0.17	-0.0
3,327,625	+		ABIE40_RS16700	0.17	+0.5
3,327,625	+		ABIE40_RS16700	0.17	+0.0
3,327,625	+		ABIE40_RS16700	0.17	+0.6
3,327,625	+		ABIE40_RS16700	0.17	-1.9
3,327,626	-		ABIE40_RS16700	0.17	-0.6
3,327,626	-		ABIE40_RS16700	0.17	-1.1
3,327,760	+		ABIE40_RS16700	0.29	+1.1
3,327,760	+		ABIE40_RS16700	0.29	+0.1
3,327,760	+		ABIE40_RS16700	0.29	-0.3
3,327,760	+		ABIE40_RS16700	0.29	+0.4
3,327,760	+		ABIE40_RS16700	0.29	-2.8
3,327,760	+		ABIE40_RS16700	0.29	-0.1
3,327,760	+		ABIE40_RS16700	0.29	-1.8
3,327,760	+		ABIE40_RS16700	0.29	-0.6
3,327,760	+		ABIE40_RS16700	0.29	+0.0
3,327,760	+		ABIE40_RS16700	0.29	-1.3
3,327,760	+		ABIE40_RS16700	0.29	+0.6
3,327,761	-		ABIE40_RS16700	0.29	+0.3
3,327,761	-		ABIE40_RS16700	0.29	-0.7
3,327,761	-		ABIE40_RS16700	0.29	+0.6
3,327,761	-		ABIE40_RS16700	0.29	+0.5
3,327,761	-		ABIE40_RS16700	0.29	-1.6
3,327,761	-		ABIE40_RS16700	0.29	+0.6
3,327,762	+		ABIE40_RS16700	0.29	+0.3
3,327,762	+		ABIE40_RS16700	0.29	+0.9
3,327,762	+		ABIE40_RS16700	0.29	-2.3
3,327,762	+		ABIE40_RS16700	0.29	+0.8
3,327,762	+		ABIE40_RS16700	0.29	+0.8
3,327,762	+		ABIE40_RS16700	0.29	-1.6
3,327,762	+		ABIE40_RS16700	0.29	-1.3
3,327,763	-		ABIE40_RS16700	0.29	-1.8
3,327,763	-		ABIE40_RS16700	0.29	+0.3
3,327,763	-		ABIE40_RS16700	0.29	-0.8
3,327,763	-		ABIE40_RS16700	0.29	-2.3
3,327,763	-		ABIE40_RS16700	0.29	-0.4
3,327,763	-		ABIE40_RS16700	0.29	+1.0
3,327,763	-		ABIE40_RS16700	0.29	-0.3
3,327,763	-		ABIE40_RS16700	0.29	-1.0
3,327,763	-		ABIE40_RS16700	0.29	-0.6
3,327,810	+		ABIE40_RS16700	0.34	+0.2
3,327,810	+		ABIE40_RS16700	0.34	-0.7
3,327,811	-		ABIE40_RS16700	0.34	-0.1
3,327,811	-		ABIE40_RS16700	0.34	-0.8
3,327,811	-		ABIE40_RS16700	0.34	-0.3
3,327,811	-		ABIE40_RS16700	0.34	+0.0
3,327,959	+		ABIE40_RS16700	0.48	-1.0
3,327,960	-		ABIE40_RS16700	0.48	-1.2
3,328,087	+		ABIE40_RS16700	0.59	-0.3
3,328,170	+		ABIE40_RS16700	0.67	-1.1
3,328,170	+		ABIE40_RS16700	0.67	+2.5
3,328,171	-		ABIE40_RS16700	0.67	-2.0
3,328,171	-		ABIE40_RS16700	0.67	-0.2
3,328,171	-		ABIE40_RS16700	0.67	+0.2
3,328,171	-		ABIE40_RS16700	0.67	+1.8
3,328,201	-		ABIE40_RS16700	0.70	-1.9
3,328,628	+		ABIE40_RS16705	0.48	-3.4
3,328,664	+		ABIE40_RS16705	0.66	-2.1
3,328,664	+		ABIE40_RS16705	0.66	-0.6
3,328,664	+		ABIE40_RS16705	0.66	-0.2
3,328,664	+		ABIE40_RS16705	0.66	-1.6
3,328,664	+		ABIE40_RS16705	0.66	-0.5
3,328,665	-		ABIE40_RS16705	0.66	-0.8
3,328,734	+				-1.2
3,328,734	+				+0.8
3,328,735	-				-1.3
3,328,735	-				-0.0
3,328,735	-				+1.5
3,328,845	-		ABIE40_RS16710	0.17	+0.1
3,328,945	+		ABIE40_RS16710	0.31	+0.4
3,329,044	+		ABIE40_RS16710	0.45	+0.2
3,329,045	-		ABIE40_RS16710	0.46	-1.7
3,329,045	-		ABIE40_RS16710	0.46	+0.8
3,329,079	-		ABIE40_RS16710	0.50	+0.8
3,329,140	+		ABIE40_RS16710	0.59	-0.4
3,329,140	+		ABIE40_RS16710	0.59	+1.4
3,329,140	+		ABIE40_RS16710	0.59	-1.0
3,329,140	+		ABIE40_RS16710	0.59	+1.2
3,329,140	+		ABIE40_RS16710	0.59	-1.6
3,329,140	+		ABIE40_RS16710	0.59	-1.6
3,329,140	+		ABIE40_RS16710	0.59	+1.4
3,329,140	+		ABIE40_RS16710	0.59	-1.4
3,329,140	+		ABIE40_RS16710	0.59	+0.7
3,329,141	-		ABIE40_RS16710	0.59	-1.0
3,329,141	-		ABIE40_RS16710	0.59	+1.6
3,329,141	-		ABIE40_RS16710	0.59	-0.4
3,329,141	-		ABIE40_RS16710	0.59	-1.6
3,329,141	-		ABIE40_RS16710	0.59	+0.5
3,329,141	-		ABIE40_RS16710	0.59	-0.1
3,329,186	+		ABIE40_RS16710	0.66	-0.8
3,329,186	+		ABIE40_RS16710	0.66	-1.5
3,329,186	+		ABIE40_RS16710	0.66	-1.8
3,329,186	+		ABIE40_RS16710	0.66	-0.3
3,329,186	+		ABIE40_RS16710	0.66	-0.1
3,329,187	-		ABIE40_RS16710	0.66	-2.1
3,329,269	+		ABIE40_RS16710	0.78	-0.7
3,329,269	+		ABIE40_RS16710	0.78	+0.4
3,329,269	+		ABIE40_RS16710	0.78	+0.5
3,329,269	+		ABIE40_RS16710	0.78	-2.2
3,329,359	+				-1.4
3,329,359	+				-0.2
3,329,359	+				+2.8
3,329,360	-				-1.2
3,329,360	-				+0.6
3,329,360	-				+2.1
3,329,380	+				-1.1
3,329,381	-				+0.6
3,329,381	-				-1.4
3,329,381	-				+0.9
3,329,401	+				+0.2
3,329,401	+				-1.0
3,329,401	+				-0.9
3,329,401	+				-0.1
3,329,402	-				+0.4
3,329,402	-				-1.3
3,329,402	-				-0.3
3,329,402	-				-0.5
3,329,479	+				+0.5
3,329,479	+				-0.1