Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS10980

Experiment: R2A with 1-octen-3-ol 0.904549 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 0.904549 mM
2,127,289	-		ABIE40_RS10975	0.57	+4.3
2,127,302	-		ABIE40_RS10975	0.58	+2.3
2,127,336	+		ABIE40_RS10975	0.60	+0.0
2,127,336	+		ABIE40_RS10975	0.60	+0.1
2,127,337	-		ABIE40_RS10975	0.60	-2.0
2,127,337	-		ABIE40_RS10975	0.60	-0.6
2,127,337	-		ABIE40_RS10975	0.60	+0.3
2,127,366	+		ABIE40_RS10975	0.62	-1.6
2,127,367	-		ABIE40_RS10975	0.62	+0.2
2,127,367	-		ABIE40_RS10975	0.62	-0.1
2,127,369	+		ABIE40_RS10975	0.62	-1.0
2,127,370	-		ABIE40_RS10975	0.62	-1.5
2,127,370	-		ABIE40_RS10975	0.62	-1.8
2,127,370	-		ABIE40_RS10975	0.62	-0.3
2,127,370	-		ABIE40_RS10975	0.62	+3.0
2,127,372	+		ABIE40_RS10975	0.63	+0.2
2,127,372	+		ABIE40_RS10975	0.63	-0.3
2,127,373	-		ABIE40_RS10975	0.63	-0.4
2,127,373	-		ABIE40_RS10975	0.63	-0.7
2,127,373	-		ABIE40_RS10975	0.63	-0.5
2,127,373	-		ABIE40_RS10975	0.63	-1.2
2,127,433	+		ABIE40_RS10975	0.66	-0.4
2,127,433	+		ABIE40_RS10975	0.66	-0.4
2,127,434	-		ABIE40_RS10975	0.66	-0.6
2,127,526	-		ABIE40_RS10975	0.72	+2.0
2,127,621	+		ABIE40_RS10975	0.78	-0.4
2,127,621	+		ABIE40_RS10975	0.78	+0.7
2,127,621	+		ABIE40_RS10975	0.78	-1.5
2,127,621	+		ABIE40_RS10975	0.78	-3.1
2,127,622	-		ABIE40_RS10975	0.78	-2.4
2,127,622	-		ABIE40_RS10975	0.78	-0.4
2,127,622	-		ABIE40_RS10975	0.78	+0.6
2,127,622	-		ABIE40_RS10975	0.78	-0.4
2,127,622	-		ABIE40_RS10975	0.78	-0.4
2,127,622	-		ABIE40_RS10975	0.78	-1.4
2,127,622	-		ABIE40_RS10975	0.78	-0.9
2,127,626	-		ABIE40_RS10975	0.78	-1.2
2,127,669	+		ABIE40_RS10975	0.81	-1.7
2,127,669	+		ABIE40_RS10975	0.81	-1.5
2,127,669	+		ABIE40_RS10975	0.81	-0.4
2,127,669	+		ABIE40_RS10975	0.81	-0.2
2,127,669	+		ABIE40_RS10975	0.81	-0.4
2,127,669	+		ABIE40_RS10975	0.81	-2.1
2,127,670	-		ABIE40_RS10975	0.81	+1.4
2,127,670	-		ABIE40_RS10975	0.81	-1.0
2,127,670	-		ABIE40_RS10975	0.81	+0.4
2,127,670	-		ABIE40_RS10975	0.81	-3.0
2,127,673	+		ABIE40_RS10975	0.81	-2.2
2,127,674	-		ABIE40_RS10975	0.81	-0.8
2,127,674	-		ABIE40_RS10975	0.81	+0.4
2,127,715	+		ABIE40_RS10975	0.84	-0.7
2,127,715	+		ABIE40_RS10975	0.84	-1.4
2,127,717	+		ABIE40_RS10975	0.84	+0.7
2,127,718	-		ABIE40_RS10975	0.84	-0.0
2,127,718	-		ABIE40_RS10975	0.84	-1.7
2,127,718	-		ABIE40_RS10975	0.84	-0.6
2,127,718	-		ABIE40_RS10975	0.84	+0.9
2,127,906	+				-0.3
2,127,906	+				+0.0
2,127,906	+				-0.2
2,127,906	+				-0.6
2,127,906	+				-0.4
2,127,906	+				+0.8
2,127,906	+				-3.2
2,127,906	+				+0.2
2,127,906	+				+1.8
2,127,907	-				+0.4
2,127,907	-				+0.1
2,127,907	-				-2.9
2,127,907	-				+3.5
2,127,907	-				+1.0
2,127,907	-				-0.3
2,127,907	-				+0.4
2,127,907	-				+1.0
2,127,909	+				-0.1
2,127,909	+				-0.9
2,127,909	+				-0.4
2,127,909	+				+0.6
2,127,909	+				-0.2
2,127,910	-				-0.4
2,127,910	-				-1.2
2,127,910	-				+0.4
2,127,910	-				-2.4
2,128,005	+				-0.7
2,128,005	-				-1.4
2,128,206	-				+1.5
2,128,267	+				-0.0
2,128,267	+				-1.1
2,128,267	+				+2.4
2,128,268	-				-0.2
2,128,299	-				-0.7
2,128,310	+				-0.6
2,128,311	-				-0.5
2,128,661	-		ABIE40_RS10980	0.43	-0.3
2,128,739	-		ABIE40_RS10980	0.51	+0.5
2,128,756	+		ABIE40_RS10980	0.52	+1.4
2,128,756	+		ABIE40_RS10980	0.52	-0.3
2,128,756	+		ABIE40_RS10980	0.52	-0.7
2,128,757	-		ABIE40_RS10980	0.53	+0.3
2,128,757	-		ABIE40_RS10980	0.53	-0.8
2,128,840	+		ABIE40_RS10980	0.61	-0.6
2,128,841	-		ABIE40_RS10980	0.61	-0.4
2,128,841	-		ABIE40_RS10980	0.61	-0.0
2,128,848	-		ABIE40_RS10980	0.61	-1.4
2,128,848	-		ABIE40_RS10980	0.61	+0.9
2,128,849	-		ABIE40_RS10980	0.61	-1.0
2,128,856	-		ABIE40_RS10980	0.62	-0.5
2,128,903	+		ABIE40_RS10980	0.67	-1.0
2,128,904	-		ABIE40_RS10980	0.67	-3.2
2,128,904	-		ABIE40_RS10980	0.67	+0.3
2,128,904	-		ABIE40_RS10980	0.67	+0.4
2,128,904	-		ABIE40_RS10980	0.67	-1.3
2,128,927	+		ABIE40_RS10980	0.69	+1.1
2,128,928	-		ABIE40_RS10980	0.69	+1.2
2,128,928	-		ABIE40_RS10980	0.69	-2.7
2,128,948	+		ABIE40_RS10980	0.71	-0.2
2,129,050	+		ABIE40_RS10980	0.81	+0.6
2,129,050	+		ABIE40_RS10980	0.81	+1.4
2,129,050	+		ABIE40_RS10980	0.81	+1.0
2,129,050	+		ABIE40_RS10980	0.81	+0.7
2,129,050	+		ABIE40_RS10980	0.81	+0.6
2,129,050	+		ABIE40_RS10980	0.81	+2.0
2,129,050	+		ABIE40_RS10980	0.81	+0.7
2,129,051	-		ABIE40_RS10980	0.81	-2.9
2,129,051	-		ABIE40_RS10980	0.81	-3.6
2,129,105	+		ABIE40_RS10980	0.86	-0.7
2,129,105	+		ABIE40_RS10980	0.86	+0.3
2,129,105	+		ABIE40_RS10980	0.86	+0.8
2,129,106	-		ABIE40_RS10980	0.86	+1.6
2,129,106	-		ABIE40_RS10980	0.86	-2.6
2,129,106	-		ABIE40_RS10980	0.86	+0.7
2,129,203	+				-0.0
2,129,203	+				+0.6
2,129,253	-				-2.0
2,129,253	-				+0.1
2,129,253	-				+0.4
2,129,253	-				+0.2
2,129,260	+				-0.1
2,129,298	+				+0.6
2,129,298	+				-2.7
2,129,299	-				-2.7
2,129,299	-				+2.4
2,129,299	-				+1.0
2,129,299	-				+0.6
2,129,299	-				-0.2
2,129,537	+		ABIE40_RS10985	0.18	+0.5
2,129,537	+		ABIE40_RS10985	0.18	+1.0
2,129,537	+		ABIE40_RS10985	0.18	-0.4
2,129,538	-		ABIE40_RS10985	0.18	+0.8
2,129,613	+		ABIE40_RS10985	0.25	-0.8
2,129,614	-		ABIE40_RS10985	0.25	+0.1
2,129,614	-		ABIE40_RS10985	0.25	+1.0
2,129,614	-		ABIE40_RS10985	0.25	-1.0
2,129,672	+		ABIE40_RS10985	0.30	-0.7
2,129,672	+		ABIE40_RS10985	0.30	+0.3
2,129,672	+		ABIE40_RS10985	0.30	-0.5
2,129,672	+		ABIE40_RS10985	0.30	+0.9
2,129,672	+		ABIE40_RS10985	0.30	+0.3
2,129,673	-		ABIE40_RS10985	0.30	+0.2
2,129,673	-		ABIE40_RS10985	0.30	-0.2
2,129,673	-		ABIE40_RS10985	0.30	+1.0
2,129,673	-		ABIE40_RS10985	0.30	-2.8
2,129,673	-		ABIE40_RS10985	0.30	-2.5
2,129,673	-		ABIE40_RS10985	0.30	+0.7
2,129,673	-		ABIE40_RS10985	0.30	+0.8
2,129,703	+		ABIE40_RS10985	0.33	+0.2
2,129,704	-		ABIE40_RS10985	0.33	+0.2
2,129,704	-		ABIE40_RS10985	0.33	+0.7
2,129,704	-		ABIE40_RS10985	0.33	-0.0
2,129,704	-		ABIE40_RS10985	0.33	+0.5
2,129,921	+		ABIE40_RS10985	0.52	-1.0
2,129,921	+		ABIE40_RS10985	0.52	+2.2
2,129,921	+		ABIE40_RS10985	0.52	-1.7
2,129,921	+		ABIE40_RS10985	0.52	-1.4
2,129,922	-		ABIE40_RS10985	0.52	-0.2
2,129,922	-		ABIE40_RS10985	0.52	-1.0
2,129,922	-		ABIE40_RS10985	0.52	+1.0
2,129,922	-		ABIE40_RS10985	0.52	+1.1
2,129,922	-		ABIE40_RS10985	0.52	-1.6
2,129,922	-		ABIE40_RS10985	0.52	+1.1
2,129,922	-		ABIE40_RS10985	0.52	+0.6
2,129,922	-		ABIE40_RS10985	0.52	-0.4
2,129,924	+		ABIE40_RS10985	0.52	+0.3
2,129,924	+		ABIE40_RS10985	0.52	+0.7
2,129,924	+		ABIE40_RS10985	0.52	+1.9
2,129,925	-		ABIE40_RS10985	0.52	+0.4
2,129,925	-		ABIE40_RS10985	0.52	+0.5
2,130,014	+		ABIE40_RS10985	0.60	+1.4
2,130,015	-		ABIE40_RS10985	0.60	+0.5
2,130,015	-		ABIE40_RS10985	0.60	-1.9
2,130,015	-		ABIE40_RS10985	0.60	-1.9
2,130,015	-		ABIE40_RS10985	0.60	-0.2
2,130,032	-		ABIE40_RS10985	0.62	-0.7
2,130,032	-		ABIE40_RS10985	0.62	-0.3
2,130,191	+		ABIE40_RS10985	0.76	-3.2
2,130,192	-		ABIE40_RS10985	0.76	+0.9