Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS07060

Experiment: R2A with 1-octen-3-ol 0.904549 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 1-octen-3-ol 0.904549 mM
1,378,149	+		ABIE40_RS07055	0.11	+0.9
1,378,150	-		ABIE40_RS07055	0.11	+0.6
1,378,179	+		ABIE40_RS07055	0.13	+1.6
1,378,179	+		ABIE40_RS07055	0.13	-0.2
1,378,180	-		ABIE40_RS07055	0.14	+0.4
1,378,180	-		ABIE40_RS07055	0.14	-0.3
1,378,180	-		ABIE40_RS07055	0.14	-0.8
1,378,209	+		ABIE40_RS07055	0.16	-0.6
1,378,209	-		ABIE40_RS07055	0.16	+1.4
1,378,210	-		ABIE40_RS07055	0.17	+0.4
1,378,256	+		ABIE40_RS07055	0.21	-0.8
1,378,257	-		ABIE40_RS07055	0.21	+0.4
1,378,257	-		ABIE40_RS07055	0.21	+0.4
1,378,422	+		ABIE40_RS07055	0.37	-2.1
1,378,422	+		ABIE40_RS07055	0.37	+0.5
1,378,422	+		ABIE40_RS07055	0.37	+0.3
1,378,422	+		ABIE40_RS07055	0.37	-0.7
1,378,422	+		ABIE40_RS07055	0.37	-1.8
1,378,422	+		ABIE40_RS07055	0.37	+0.9
1,378,422	+		ABIE40_RS07055	0.37	-1.7
1,378,423	-		ABIE40_RS07055	0.37	-0.7
1,378,659	+		ABIE40_RS07055	0.60	+0.7
1,378,659	+		ABIE40_RS07055	0.60	+0.7
1,378,659	+		ABIE40_RS07055	0.60	-0.9
1,378,659	+		ABIE40_RS07055	0.60	+0.3
1,378,659	+		ABIE40_RS07055	0.60	-1.7
1,378,660	-		ABIE40_RS07055	0.61	-2.5
1,378,660	-		ABIE40_RS07055	0.61	+0.4
1,378,660	-		ABIE40_RS07055	0.61	+1.0
1,378,690	-		ABIE40_RS07055	0.63	-0.2
1,378,698	+		ABIE40_RS07055	0.64	+0.2
1,378,699	-		ABIE40_RS07055	0.64	-0.7
1,378,699	-		ABIE40_RS07055	0.64	-1.3
1,378,699	-		ABIE40_RS07055	0.64	-1.9
1,378,704	+		ABIE40_RS07055	0.65	+1.2
1,378,729	-		ABIE40_RS07055	0.67	+0.9
1,378,729	-		ABIE40_RS07055	0.67	-0.6
1,378,729	-		ABIE40_RS07055	0.67	-1.9
1,378,830	+		ABIE40_RS07055	0.77	-3.7
1,378,830	+		ABIE40_RS07055	0.77	-1.8
1,378,830	+		ABIE40_RS07055	0.77	+0.4
1,378,830	+		ABIE40_RS07055	0.77	+0.9
1,378,831	-		ABIE40_RS07055	0.77	-0.9
1,378,831	-		ABIE40_RS07055	0.77	+1.3
1,378,831	-		ABIE40_RS07055	0.77	+1.5
1,378,899	+		ABIE40_RS07055	0.84	+0.4
1,378,899	+		ABIE40_RS07055	0.84	+0.1
1,378,899	+		ABIE40_RS07055	0.84	+1.9
1,378,899	+		ABIE40_RS07055	0.84	+0.4
1,378,900	-		ABIE40_RS07055	0.84	+0.1
1,378,900	-		ABIE40_RS07055	0.84	-0.0
1,378,900	-		ABIE40_RS07055	0.84	+0.5
1,378,900	-		ABIE40_RS07055	0.84	-0.4
1,378,900	-		ABIE40_RS07055	0.84	-0.1
1,378,995	+				+0.3
1,378,995	+				+0.3
1,378,995	+				+0.6
1,378,995	+				-1.6
1,378,995	+				+0.2
1,378,996	-				-0.5
1,378,996	-				-0.0
1,379,037	+				-0.1
1,379,037	+				+0.7
1,379,037	+				+0.2
1,379,038	-				+2.2
1,379,061	+				-0.0
1,379,062	-				-2.8
1,379,062	-				+1.5
1,379,062	-				-0.9
1,379,062	-				-1.9
1,379,142	-				+0.7
1,379,142	-				-0.7
1,379,142	-				+0.1
1,379,143	+				-0.2
1,379,143	+				-0.1
1,379,143	+				+0.2
1,379,143	+				+1.0
1,379,143	+				+0.3
1,379,143	+				-0.1
1,379,143	+				-0.9
1,379,143	+				-1.0
1,379,144	-				+0.1
1,379,144	-				-0.8
1,379,144	-				-0.8
1,379,144	-				-0.2
1,379,144	-				+0.9
1,379,144	-				+1.0
1,379,147	+				+0.8
1,379,147	+				-1.3
1,379,147	+				-1.8
1,379,147	+				-1.3
1,379,147	+				-0.8
1,379,147	+				+0.1
1,379,147	+				-0.9
1,379,147	+				-0.6
1,379,147	+				-0.6
1,379,147	+				-1.1
1,379,148	-				+2.9
1,379,148	-				-0.1
1,379,148	-				+0.2
1,379,148	-				+0.5
1,379,148	-				+0.9
1,379,148	-				-2.0
1,379,148	-				-1.3
1,379,148	-				+0.2
1,379,390	-		ABIE40_RS07060	0.25	-1.2
1,379,397	+		ABIE40_RS07060	0.25	-0.3
1,379,397	+		ABIE40_RS07060	0.25	+0.6
1,379,397	+		ABIE40_RS07060	0.25	-0.1
1,379,397	+		ABIE40_RS07060	0.25	-0.7
1,379,398	-		ABIE40_RS07060	0.26	+0.0
1,379,398	-		ABIE40_RS07060	0.26	+0.5
1,379,398	-		ABIE40_RS07060	0.26	-0.9
1,379,398	-		ABIE40_RS07060	0.26	+2.6
1,379,550	+		ABIE40_RS07060	0.41	-0.9
1,379,550	+		ABIE40_RS07060	0.41	-2.4
1,379,551	-		ABIE40_RS07060	0.41	-1.3
1,379,551	-		ABIE40_RS07060	0.41	-1.8
1,379,551	-		ABIE40_RS07060	0.41	-0.6
1,379,551	-		ABIE40_RS07060	0.41	+1.9
1,379,596	-		ABIE40_RS07060	0.46	-0.2
1,379,596	-		ABIE40_RS07060	0.46	-1.6
1,379,721	+		ABIE40_RS07060	0.59	+0.3
1,379,721	+		ABIE40_RS07060	0.59	-2.1
1,379,722	-		ABIE40_RS07060	0.59	-2.5
1,379,722	-		ABIE40_RS07060	0.59	-1.0
1,379,722	-		ABIE40_RS07060	0.59	-1.6
1,379,723	+		ABIE40_RS07060	0.59	+1.4
1,379,723	+		ABIE40_RS07060	0.59	-3.6
1,379,723	+		ABIE40_RS07060	0.59	-0.1
1,379,724	-		ABIE40_RS07060	0.59	-2.1
1,379,784	+		ABIE40_RS07060	0.65	-0.1
1,379,784	+		ABIE40_RS07060	0.65	-1.9
1,380,015	+		ABIE40_RS07060	0.89	-2.2
1,380,015	+		ABIE40_RS07060	0.89	+0.6
1,380,015	+		ABIE40_RS07060	0.89	-0.1
1,380,015	+		ABIE40_RS07060	0.89	-1.3
1,380,015	+		ABIE40_RS07060	0.89	-0.9
1,380,015	+		ABIE40_RS07060	0.89	-3.0
1,380,016	-		ABIE40_RS07060	0.89	-0.1
1,380,016	-		ABIE40_RS07060	0.89	-3.0
1,380,016	-		ABIE40_RS07060	0.89	+1.0
1,380,016	-		ABIE40_RS07060	0.89	+0.4
1,380,016	-		ABIE40_RS07060	0.89	-0.2
1,380,016	-		ABIE40_RS07060	0.89	-0.3
1,380,016	-		ABIE40_RS07060	0.89	+0.7
1,380,016	-		ABIE40_RS07060	0.89	+1.9
1,380,016	-		ABIE40_RS07060	0.89	-4.4
1,380,016	-		ABIE40_RS07060	0.89	+1.1
1,380,016	-		ABIE40_RS07060	0.89	-0.4
1,380,016	-		ABIE40_RS07060	0.89	+1.4
1,380,123	+				-0.4
1,380,124	-				-0.9
1,380,148	+				-0.0
1,380,148	+				+0.3
1,380,406	+		ABIE40_RS07065	0.33	+0.3
1,380,406	+		ABIE40_RS07065	0.33	-1.6
1,380,406	+		ABIE40_RS07065	0.33	+1.7
1,380,406	+		ABIE40_RS07065	0.33	-0.4
1,380,406	+		ABIE40_RS07065	0.33	-2.3
1,380,407	-		ABIE40_RS07065	0.33	+0.5
1,380,407	-		ABIE40_RS07065	0.33	+1.6
1,380,407	-		ABIE40_RS07065	0.33	-0.0
1,380,407	-		ABIE40_RS07065	0.33	+0.3
1,380,407	-		ABIE40_RS07065	0.33	-0.0
1,380,407	-		ABIE40_RS07065	0.33	-0.4
1,380,407	-		ABIE40_RS07065	0.33	+0.4
1,380,407	-		ABIE40_RS07065	0.33	+0.9
1,380,407	-		ABIE40_RS07065	0.33	+0.8
1,380,407	-		ABIE40_RS07065	0.33	+0.0
1,380,407	-		ABIE40_RS07065	0.33	-0.3
1,380,407	-		ABIE40_RS07065	0.33	+0.8
1,380,407	-		ABIE40_RS07065	0.33	+0.8
1,380,508	+		ABIE40_RS07065	0.45	+0.7
1,380,509	-		ABIE40_RS07065	0.45	+1.9
1,380,547	+		ABIE40_RS07065	0.49	+0.0
1,380,597	+		ABIE40_RS07065	0.55	+0.4
1,380,598	-		ABIE40_RS07065	0.55	-1.3
1,380,796	+		ABIE40_RS07065	0.79	+1.6
1,380,796	+		ABIE40_RS07065	0.79	-1.2
1,380,796	+		ABIE40_RS07065	0.79	+1.0
1,380,796	+		ABIE40_RS07065	0.79	-1.2
1,380,796	+		ABIE40_RS07065	0.79	+1.7
1,380,853	+		ABIE40_RS07065	0.85	+0.6
1,380,853	+		ABIE40_RS07065	0.85	-0.4
1,380,854	-		ABIE40_RS07065	0.85	+0.0
1,380,854	-		ABIE40_RS07065	0.85	+0.4
1,380,868	+		ABIE40_RS07065	0.87	+1.3
1,381,000	+				-1.7
1,381,000	+				+1.1
1,381,001	-				-1.4
1,381,001	-				+3.9
1,381,031	+				+0.9
1,381,065	+		ABIE40_RS07070	0.11	-0.7
1,381,065	+		ABIE40_RS07070	0.11	-1.6
1,381,065	+		ABIE40_RS07070	0.11	-1.6
1,381,065	+		ABIE40_RS07070	0.11	+0.3
1,381,065	+		ABIE40_RS07070	0.11	+0.2
1,381,066	-		ABIE40_RS07070	0.11	-0.8
1,381,068	+		ABIE40_RS07070	0.11	+1.9
1,381,068	+		ABIE40_RS07070	0.11	-1.0
1,381,068	+		ABIE40_RS07070	0.11	-0.1
1,381,068	+		ABIE40_RS07070	0.11	-2.8
1,381,069	-		ABIE40_RS07070	0.12	-2.4