Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS29125

Experiment: R2A with 1-octen-3-ol 1.3568235 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE40_RS29120 and ABIE40_RS29125 are separated by 154 nucleotidesABIE40_RS29125 and ABIE40_RS29130 are separated by 4 nucleotides ABIE40_RS29120: ABIE40_RS29120 - plasmid replication protein RepC, at 523,183 to 524,397 _RS29120 ABIE40_RS29125: ABIE40_RS29125 - plasmid partitioning protein RepB, at 524,552 to 525,553 _RS29125 ABIE40_RS29130: ABIE40_RS29130 - plasmid partitioning protein RepA, at 525,558 to 526,751 _RS29130 Position (kb) 524 525 526Strain fitness (log2 ratio) -1 0 1at 524.554 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A with 1-octen-3-ol 1.3568235 mM
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524,554 - -1.1

Or see this region's nucleotide sequence