Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS07305

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
1,431,990	+		ABIE40_RS07300	0.34	-2.3
1,431,990	+		ABIE40_RS07300	0.34	+0.4
1,431,998	+		ABIE40_RS07300	0.35	-0.6
1,431,998	+		ABIE40_RS07300	0.35	-1.4
1,431,999	-		ABIE40_RS07300	0.35	-1.0
1,432,013	+		ABIE40_RS07300	0.36	-1.0
1,432,014	-		ABIE40_RS07300	0.36	-1.5
1,432,014	-		ABIE40_RS07300	0.36	-2.4
1,432,083	+		ABIE40_RS07300	0.42	+0.0
1,432,083	+		ABIE40_RS07300	0.42	+0.6
1,432,084	-		ABIE40_RS07300	0.42	-0.6
1,432,084	-		ABIE40_RS07300	0.42	+0.2
1,432,129	+		ABIE40_RS07300	0.45	-0.5
1,432,129	+		ABIE40_RS07300	0.45	+0.3
1,432,129	+		ABIE40_RS07300	0.45	+1.2
1,432,130	-		ABIE40_RS07300	0.45	-0.2
1,432,130	-		ABIE40_RS07300	0.45	-2.2
1,432,130	-		ABIE40_RS07300	0.45	-1.5
1,432,244	+		ABIE40_RS07300	0.55	-2.0
1,432,245	-		ABIE40_RS07300	0.55	+0.1
1,432,245	-		ABIE40_RS07300	0.55	+0.2
1,432,245	-		ABIE40_RS07300	0.55	+0.6
1,432,426	+		ABIE40_RS07300	0.69	+0.7
1,432,426	+		ABIE40_RS07300	0.69	+0.5
1,432,426	+		ABIE40_RS07300	0.69	-0.7
1,432,427	+		ABIE40_RS07300	0.69	+0.2
1,432,427	-		ABIE40_RS07300	0.69	-0.2
1,432,427	-		ABIE40_RS07300	0.69	-1.0
1,432,514	+		ABIE40_RS07300	0.76	+1.6
1,432,515	-		ABIE40_RS07300	0.77	-0.6
1,432,561	+		ABIE40_RS07300	0.80	-1.7
1,432,561	+		ABIE40_RS07300	0.80	-0.6
1,432,562	-		ABIE40_RS07300	0.80	-0.2
1,432,562	-		ABIE40_RS07300	0.80	-0.8
1,432,580	-		ABIE40_RS07300	0.82	+0.5
1,432,623	-		ABIE40_RS07300	0.85	+0.5
1,432,793	+				+0.5
1,432,794	-				-0.2
1,432,826	+				-1.7
1,432,826	+				-1.7
1,432,827	-				-1.8
1,432,827	-				-0.1
1,432,842	+				-0.9
1,432,843	-				+0.8
1,432,856	+				+0.4
1,432,856	+				+0.3
1,432,901	+				-0.2
1,432,901	+				-0.5
1,432,920	+				+1.3
1,432,926	-				-1.5
1,432,938	+				-0.8
1,432,938	+				-0.3
1,432,939	-				+1.0
1,432,939	-				+1.6
1,432,941	-				-2.1
1,432,959	+				-1.4
1,432,983	+				-1.2
1,432,983	+				-0.2
1,432,983	+				-0.6
1,432,983	+				+2.4
1,432,983	+				-2.8
1,432,983	+				-0.8
1,432,983	+				+1.0
1,432,983	+				-2.6
1,432,983	+				+0.6
1,432,984	-				-1.2
1,432,984	-				-0.3
1,432,991	+				+0.4
1,432,991	+				-3.5
1,432,997	-				-0.8
1,433,046	+				-2.2
1,433,047	-				-0.1
1,433,070	+				-0.1
1,433,070	+				+0.1
1,433,070	+				-0.4
1,433,101	-				+0.2
1,433,160	+		ABIE40_RS07305	0.10	-0.4
1,433,161	-		ABIE40_RS07305	0.10	-0.8
1,433,161	-		ABIE40_RS07305	0.10	-1.8
1,433,161	-		ABIE40_RS07305	0.10	-1.0
1,433,217	+		ABIE40_RS07305	0.14	+0.8
1,433,217	+		ABIE40_RS07305	0.14	-1.0
1,433,217	+		ABIE40_RS07305	0.14	-1.0
1,433,217	+		ABIE40_RS07305	0.14	-1.7
1,433,217	+		ABIE40_RS07305	0.14	-2.9
1,433,217	+		ABIE40_RS07305	0.14	+1.5
1,433,218	-		ABIE40_RS07305	0.14	+2.0
1,433,218	-		ABIE40_RS07305	0.14	-2.8
1,433,218	-		ABIE40_RS07305	0.14	-0.3
1,433,218	-		ABIE40_RS07305	0.14	+0.7
1,433,218	-		ABIE40_RS07305	0.14	-1.6
1,433,257	-		ABIE40_RS07305	0.16	-0.6
1,433,257	-		ABIE40_RS07305	0.16	-0.0
1,433,257	-		ABIE40_RS07305	0.16	+1.8
1,433,257	-		ABIE40_RS07305	0.16	+0.7
1,433,258	+		ABIE40_RS07305	0.16	-1.4
1,433,258	+		ABIE40_RS07305	0.16	+0.8
1,433,258	+		ABIE40_RS07305	0.16	-2.0
1,433,361	+		ABIE40_RS07305	0.22	+1.6
1,433,362	-		ABIE40_RS07305	0.22	-2.1
1,433,447	+		ABIE40_RS07305	0.27	-0.4
1,433,485	-		ABIE40_RS07305	0.29	-0.7
1,433,485	-		ABIE40_RS07305	0.29	-1.0
1,433,485	-		ABIE40_RS07305	0.29	-1.5
1,433,485	-		ABIE40_RS07305	0.29	-1.5
1,433,485	-		ABIE40_RS07305	0.29	+0.5
1,433,485	-		ABIE40_RS07305	0.29	+1.2
1,433,490	+		ABIE40_RS07305	0.29	+0.0
1,433,490	+		ABIE40_RS07305	0.29	-2.6
1,433,490	+		ABIE40_RS07305	0.29	+1.5
1,433,490	+		ABIE40_RS07305	0.29	+2.4
1,433,490	+		ABIE40_RS07305	0.29	-0.4
1,433,490	+		ABIE40_RS07305	0.29	+0.3
1,433,490	+		ABIE40_RS07305	0.29	-0.6
1,433,490	+		ABIE40_RS07305	0.29	-0.1
1,433,490	+		ABIE40_RS07305	0.29	-0.9
1,433,491	-		ABIE40_RS07305	0.30	+0.1
1,433,491	-		ABIE40_RS07305	0.30	-1.2
1,433,491	-		ABIE40_RS07305	0.30	+1.2
1,433,491	-		ABIE40_RS07305	0.30	-0.6
1,433,491	-		ABIE40_RS07305	0.30	-1.9
1,433,491	-		ABIE40_RS07305	0.30	-0.2
1,433,491	-		ABIE40_RS07305	0.30	-0.6
1,433,491	-		ABIE40_RS07305	0.30	-1.9
1,433,491	-		ABIE40_RS07305	0.30	-0.1
1,433,491	-		ABIE40_RS07305	0.30	-2.1
1,433,492	+		ABIE40_RS07305	0.30	-0.1
1,433,492	+		ABIE40_RS07305	0.30	-1.4
1,433,493	-		ABIE40_RS07305	0.30	-2.1
1,433,493	-		ABIE40_RS07305	0.30	+0.9
1,433,493	-		ABIE40_RS07305	0.30	+0.0
1,433,556	-		ABIE40_RS07305	0.33	+0.7
1,433,655	+		ABIE40_RS07305	0.39	-1.0
1,433,655	+		ABIE40_RS07305	0.39	+0.8
1,433,655	+		ABIE40_RS07305	0.39	+1.2
1,433,655	+		ABIE40_RS07305	0.39	-0.3
1,433,656	-		ABIE40_RS07305	0.39	-1.2
1,433,656	-		ABIE40_RS07305	0.39	+0.2
1,433,656	-		ABIE40_RS07305	0.39	+0.5
1,433,825	+		ABIE40_RS07305	0.49	-0.7
1,433,825	+		ABIE40_RS07305	0.49	+0.8
1,433,825	+		ABIE40_RS07305	0.49	-0.9
1,433,826	-		ABIE40_RS07305	0.49	-2.6
1,433,826	-		ABIE40_RS07305	0.49	-2.6
1,433,826	-		ABIE40_RS07305	0.49	-0.7
1,433,850	-		ABIE40_RS07305	0.50	+0.5
1,433,908	-		ABIE40_RS07305	0.54	+0.9
1,433,967	+		ABIE40_RS07305	0.57	-1.7
1,433,968	-		ABIE40_RS07305	0.57	+0.4
1,433,973	+		ABIE40_RS07305	0.57	-0.4
1,433,973	+		ABIE40_RS07305	0.57	-1.7
1,433,973	+		ABIE40_RS07305	0.57	-0.8
1,433,973	+		ABIE40_RS07305	0.57	+0.8
1,433,974	-		ABIE40_RS07305	0.57	+1.1
1,433,974	-		ABIE40_RS07305	0.57	-3.6
1,433,974	-		ABIE40_RS07305	0.57	-3.3
1,433,974	-		ABIE40_RS07305	0.57	+0.1
1,433,974	-		ABIE40_RS07305	0.57	+2.7
1,433,974	-		ABIE40_RS07305	0.57	-1.2
1,433,974	-		ABIE40_RS07305	0.57	-1.2
1,434,102	-		ABIE40_RS07305	0.65	+3.0
1,434,309	+		ABIE40_RS07305	0.77	-0.0
1,434,513	+		ABIE40_RS07305	0.89	+2.2
1,434,513	+		ABIE40_RS07305	0.89	+0.8
1,434,513	+		ABIE40_RS07305	0.89	-0.2
1,434,514	-		ABIE40_RS07305	0.89	+2.2
1,434,514	-		ABIE40_RS07305	0.89	+1.6
1,434,514	-		ABIE40_RS07305	0.89	-0.3
1,434,514	-		ABIE40_RS07305	0.89	+1.0
1,434,514	-		ABIE40_RS07305	0.89	-1.0
1,434,544	-				-0.1
1,434,615	+				-0.7
1,434,616	-				-0.6
1,434,736	+				-1.8
1,434,736	+				-0.6
1,434,736	+				-0.3
1,434,736	+				+1.3
1,434,736	+				-1.4
1,434,736	+				-1.4
1,434,736	+				+1.0
1,434,737	-				-2.4
1,434,737	-				+0.2
1,434,737	-				-1.3
1,434,829	+				-1.8
1,434,829	+				+2.9
1,434,945	-		ABIE40_RS07310	0.18	+2.1
1,434,945	-		ABIE40_RS07310	0.18	-1.6
1,434,945	-		ABIE40_RS07310	0.18	-0.6
1,435,000	-		ABIE40_RS07310	0.23	+0.8
1,435,033	+		ABIE40_RS07310	0.25	+1.5
1,435,034	-		ABIE40_RS07310	0.25	-2.6
1,435,034	-		ABIE40_RS07310	0.25	-1.9
1,435,034	-		ABIE40_RS07310	0.25	+0.1
1,435,046	-		ABIE40_RS07310	0.26	+2.6
1,435,046	-		ABIE40_RS07310	0.26	+0.8
1,435,080	-		ABIE40_RS07310	0.29	-0.8
1,435,123	+		ABIE40_RS07310	0.32	-1.7
1,435,124	-		ABIE40_RS07310	0.32	+2.0
1,435,237	-		ABIE40_RS07310	0.41	+0.8
1,435,449	+		ABIE40_RS07310	0.57	+0.7
1,435,450	-		ABIE40_RS07310	0.57	+1.4
1,435,647	+		ABIE40_RS07310	0.73	-1.6
1,435,647	+		ABIE40_RS07310	0.73	-0.1
1,435,648	-		ABIE40_RS07310	0.73	+2.2
1,435,648	-		ABIE40_RS07310	0.73	-1.1