Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS12025

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 6-Pentyl-2H-pyran-2-one 0.716205166666667 mM
2,341,993	-		ABIE40_RS12020	0.15	+0.7
2,341,993	-		ABIE40_RS12020	0.15	-0.7
2,341,998	+		ABIE40_RS12020	0.16	+1.6
2,341,998	+		ABIE40_RS12020	0.16	+1.2
2,341,998	+		ABIE40_RS12020	0.16	+0.5
2,341,999	-		ABIE40_RS12020	0.16	-0.8
2,341,999	-		ABIE40_RS12020	0.16	+1.2
2,341,999	-		ABIE40_RS12020	0.16	+0.4
2,341,999	-		ABIE40_RS12020	0.16	+0.6
2,341,999	-		ABIE40_RS12020	0.16	+0.4
2,341,999	-		ABIE40_RS12020	0.16	+0.9
2,342,032	-		ABIE40_RS12020	0.19	+0.1
2,342,032	-		ABIE40_RS12020	0.19	+0.8
2,342,032	-		ABIE40_RS12020	0.19	+0.1
2,342,130	+		ABIE40_RS12020	0.27	-0.0
2,342,130	+		ABIE40_RS12020	0.27	-0.1
2,342,130	+		ABIE40_RS12020	0.27	+0.4
2,342,131	-		ABIE40_RS12020	0.27	+0.4
2,342,251	+		ABIE40_RS12020	0.38	-0.8
2,342,251	+		ABIE40_RS12020	0.38	+0.2
2,342,252	-		ABIE40_RS12020	0.38	-0.1
2,342,253	+		ABIE40_RS12020	0.38	+1.3
2,342,254	-		ABIE40_RS12020	0.38	-0.5
2,342,322	+		ABIE40_RS12020	0.44	+0.4
2,342,322	+		ABIE40_RS12020	0.44	+0.2
2,342,322	+		ABIE40_RS12020	0.44	+0.2
2,342,322	+		ABIE40_RS12020	0.44	+0.6
2,342,322	+		ABIE40_RS12020	0.44	+1.7
2,342,322	+		ABIE40_RS12020	0.44	-0.2
2,342,323	-		ABIE40_RS12020	0.44	-1.3
2,342,323	-		ABIE40_RS12020	0.44	+0.7
2,342,323	-		ABIE40_RS12020	0.44	+0.1
2,342,323	-		ABIE40_RS12020	0.44	-1.7
2,342,323	-		ABIE40_RS12020	0.44	+0.1
2,342,337	+		ABIE40_RS12020	0.45	-1.0
2,342,337	+		ABIE40_RS12020	0.45	+1.5
2,342,337	+		ABIE40_RS12020	0.45	-0.4
2,342,338	-		ABIE40_RS12020	0.45	+1.0
2,342,938	-				+0.5
2,342,953	+				-1.5
2,342,953	+				+0.6
2,342,953	+				-0.1
2,342,953	+				-0.4
2,342,954	-				-0.9
2,342,954	-				-0.9
2,342,954	-				+1.9
2,342,954	-				+0.3
2,342,954	-				+0.3
2,342,954	-				-0.9
2,342,954	-				-0.8
2,342,954	-				-0.5
2,342,954	-				+0.2
2,342,991	-				-0.3
2,343,188	+		ABIE40_RS12025	0.16	+0.6
2,343,189	-		ABIE40_RS12025	0.16	-0.4
2,343,189	-		ABIE40_RS12025	0.16	-0.6
2,343,324	-		ABIE40_RS12025	0.26	+1.2
2,343,482	+		ABIE40_RS12025	0.37	-0.9
2,343,483	-		ABIE40_RS12025	0.37	-0.5
2,343,483	-		ABIE40_RS12025	0.37	+0.9
2,343,483	-		ABIE40_RS12025	0.37	-0.2
2,343,484	-		ABIE40_RS12025	0.37	-1.2
2,343,524	+		ABIE40_RS12025	0.40	-2.3
2,343,524	+		ABIE40_RS12025	0.40	-2.0
2,343,524	+		ABIE40_RS12025	0.40	-0.3
2,343,525	-		ABIE40_RS12025	0.40	-0.3
2,343,542	+		ABIE40_RS12025	0.42	-2.1
2,343,542	+		ABIE40_RS12025	0.42	-1.1
2,343,542	+		ABIE40_RS12025	0.42	-0.5
2,343,542	+		ABIE40_RS12025	0.42	-0.7
2,343,542	+		ABIE40_RS12025	0.42	+0.9
2,343,542	+		ABIE40_RS12025	0.42	-0.4
2,343,543	-		ABIE40_RS12025	0.42	+0.4
2,343,543	-		ABIE40_RS12025	0.42	-0.3
2,343,543	-		ABIE40_RS12025	0.42	-0.9
2,343,543	-		ABIE40_RS12025	0.42	+0.4
2,343,581	+		ABIE40_RS12025	0.44	-1.7
2,343,582	-		ABIE40_RS12025	0.45	+0.6
2,343,582	-		ABIE40_RS12025	0.45	+0.1
2,343,582	-		ABIE40_RS12025	0.45	-0.6
2,343,603	+		ABIE40_RS12025	0.46	-0.1
2,343,641	+		ABIE40_RS12025	0.49	+0.4
2,343,641	+		ABIE40_RS12025	0.49	+0.9
2,343,642	-		ABIE40_RS12025	0.49	-0.1
2,343,642	-		ABIE40_RS12025	0.49	-0.7
2,343,900	+		ABIE40_RS12025	0.67	+0.9
2,343,947	+		ABIE40_RS12025	0.71	+0.6
2,343,947	+		ABIE40_RS12025	0.71	-0.0
2,343,947	+		ABIE40_RS12025	0.71	-0.1
2,343,948	-		ABIE40_RS12025	0.71	+1.2
2,343,948	-		ABIE40_RS12025	0.71	-1.3
2,343,948	-		ABIE40_RS12025	0.71	-0.4
2,343,948	-		ABIE40_RS12025	0.71	+0.3
2,343,953	+		ABIE40_RS12025	0.71	+0.7
2,343,953	+		ABIE40_RS12025	0.71	+0.7
2,343,954	-		ABIE40_RS12025	0.71	-1.1
2,344,002	+		ABIE40_RS12025	0.75	-0.2
2,344,003	-		ABIE40_RS12025	0.75	+0.3
2,344,073	+		ABIE40_RS12025	0.80	+0.1
2,344,073	+		ABIE40_RS12025	0.80	+0.1
2,344,100	+		ABIE40_RS12025	0.82	-0.8
2,344,100	+		ABIE40_RS12025	0.82	-0.7
2,344,307	+				+1.1
2,344,331	-				-0.8
2,344,342	-				+0.0
2,344,342	-				-0.7
2,344,342	-				+0.3
2,344,342	-				-0.4
2,344,344	+				+0.4
2,344,344	+				+0.9
2,344,344	+				+0.7
2,344,344	+				+1.0
2,344,345	-				-0.0
2,344,345	-				+0.7
2,344,345	-				-1.2
2,344,345	-				+2.5
2,344,345	-				+0.4
2,344,345	-				-1.4
2,344,345	-				-0.4
2,344,355	+				-0.7
2,344,355	+				+0.0
2,344,356	-				+0.2
2,344,369	-				+0.1
2,344,369	-				+0.3
2,344,404	+				-0.5
2,344,564	+		ABIE40_RS12030	0.48	+1.1
2,344,564	+		ABIE40_RS12030	0.48	-0.5
2,344,565	-		ABIE40_RS12030	0.48	+1.2
2,344,565	-		ABIE40_RS12030	0.48	-0.3
2,344,565	-		ABIE40_RS12030	0.48	-0.1
2,344,565	-		ABIE40_RS12030	0.48	+0.2
2,344,592	-		ABIE40_RS12030	0.54	+0.3
2,344,592	-		ABIE40_RS12030	0.54	+1.5
2,344,631	+		ABIE40_RS12030	0.64	-1.3
2,344,631	+		ABIE40_RS12030	0.64	+0.1
2,344,631	+		ABIE40_RS12030	0.64	+0.0
2,344,631	+		ABIE40_RS12030	0.64	-0.5
2,344,631	+		ABIE40_RS12030	0.64	+0.3
2,344,631	+		ABIE40_RS12030	0.64	+0.1
2,344,631	+		ABIE40_RS12030	0.64	+0.5
2,344,632	-		ABIE40_RS12030	0.64	-0.1
2,344,632	-		ABIE40_RS12030	0.64	+0.6
2,344,632	-		ABIE40_RS12030	0.64	-0.4
2,344,632	-		ABIE40_RS12030	0.64	+0.0
2,344,632	-		ABIE40_RS12030	0.64	+0.6
2,344,633	+		ABIE40_RS12030	0.64	-1.4
2,344,634	-		ABIE40_RS12030	0.64	-0.7
2,344,635	-		ABIE40_RS12030	0.65	-0.7
2,344,672	+		ABIE40_RS12030	0.74	-0.7
2,344,694	-		ABIE40_RS12030	0.79	+0.0
2,344,719	-		ABIE40_RS12030	0.85	+1.6
2,344,756	+				-0.2
2,344,756	+				-0.4
2,344,756	+				+0.9
2,344,757	-				+0.4
2,344,757	-				+0.4
2,344,757	-				-0.4
2,344,786	+				+0.3
2,344,793	+				-0.4
2,344,930	+		ABIE40_RS12035	0.33	+0.9
2,344,930	+		ABIE40_RS12035	0.33	+0.1
2,344,930	+		ABIE40_RS12035	0.33	+0.7
2,344,949	+		ABIE40_RS12035	0.37	-1.9
2,344,949	+		ABIE40_RS12035	0.37	-0.1
2,344,949	+		ABIE40_RS12035	0.37	-0.7
2,345,084	+		ABIE40_RS12035	0.65	+0.1
2,345,084	+		ABIE40_RS12035	0.65	-0.0
2,345,085	-		ABIE40_RS12035	0.65	-2.1
2,345,086	+		ABIE40_RS12035	0.66	-0.6
2,345,086	+		ABIE40_RS12035	0.66	-0.2
2,345,087	-		ABIE40_RS12035	0.66	+0.3
2,345,183	+		ABIE40_RS12035	0.86	-1.1
2,345,281	-				+0.5
2,345,281	-				+0.7
2,345,281	-				-0.7
2,345,285	+				-0.8