Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS15695

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 6-Pentyl-2H-pyran-2-one 0.835572666666667 mM
3,111,865	+		ABIE40_RS15685	0.36	-0.3
3,111,865	+		ABIE40_RS15685	0.36	-0.7
3,111,925	+		ABIE40_RS15685	0.49	+0.9
3,111,926	-		ABIE40_RS15685	0.49	-0.3
3,111,940	+		ABIE40_RS15685	0.52	-0.3
3,111,964	+		ABIE40_RS15685	0.57	+0.2
3,111,982	+		ABIE40_RS15685	0.60	+0.4
3,111,982	+		ABIE40_RS15685	0.60	+0.6
3,111,982	+		ABIE40_RS15685	0.60	-0.1
3,111,982	+		ABIE40_RS15685	0.60	-1.8
3,111,983	-		ABIE40_RS15685	0.61	-1.3
3,111,983	-		ABIE40_RS15685	0.61	+1.1
3,111,983	-		ABIE40_RS15685	0.61	+0.1
3,111,983	-		ABIE40_RS15685	0.61	-1.1
3,111,983	-		ABIE40_RS15685	0.61	+0.9
3,111,983	-		ABIE40_RS15685	0.61	-0.2
3,111,983	-		ABIE40_RS15685	0.61	+1.6
3,111,983	-		ABIE40_RS15685	0.61	+0.1
3,111,983	-		ABIE40_RS15685	0.61	+0.2
3,111,983	-		ABIE40_RS15685	0.61	-0.7
3,111,983	-		ABIE40_RS15685	0.61	+0.1
3,111,985	+		ABIE40_RS15685	0.61	+1.5
3,111,985	+		ABIE40_RS15685	0.61	+0.7
3,111,985	+		ABIE40_RS15685	0.61	+0.1
3,111,985	+		ABIE40_RS15685	0.61	+0.8
3,111,985	+		ABIE40_RS15685	0.61	+0.2
3,111,986	-		ABIE40_RS15685	0.61	-0.1
3,111,986	-		ABIE40_RS15685	0.61	-0.9
3,111,986	-		ABIE40_RS15685	0.61	+0.0
3,111,986	-		ABIE40_RS15685	0.61	-0.4
3,111,986	-		ABIE40_RS15685	0.61	-0.1
3,111,986	-		ABIE40_RS15685	0.61	-0.5
3,111,986	-		ABIE40_RS15685	0.61	-0.4
3,111,987	+		ABIE40_RS15685	0.62	-0.3
3,111,987	+		ABIE40_RS15685	0.62	+0.9
3,111,987	+		ABIE40_RS15685	0.62	+0.3
3,111,987	+		ABIE40_RS15685	0.62	+0.3
3,111,987	+		ABIE40_RS15685	0.62	+0.4
3,111,987	+		ABIE40_RS15685	0.62	-0.1
3,111,988	-		ABIE40_RS15685	0.62	+0.9
3,111,988	-		ABIE40_RS15685	0.62	+1.4
3,111,988	-		ABIE40_RS15685	0.62	-0.1
3,111,988	-		ABIE40_RS15685	0.62	-2.2
3,112,033	+		ABIE40_RS15685	0.71	-0.5
3,112,033	+		ABIE40_RS15685	0.71	+0.4
3,112,034	-		ABIE40_RS15685	0.71	-0.3
3,112,048	+		ABIE40_RS15685	0.74	-1.1
3,112,049	-		ABIE40_RS15685	0.74	+0.5
3,112,049	-		ABIE40_RS15685	0.74	-1.3
3,112,049	-		ABIE40_RS15685	0.74	+0.3
3,112,139	+				+0.2
3,112,139	+				-0.5
3,112,139	+				-1.1
3,112,139	+				+0.2
3,112,139	+				-0.3
3,112,140	-				-0.7
3,112,140	-				+1.3
3,112,269	+				+0.1
3,112,269	+				-0.2
3,112,274	+				-0.1
3,112,274	+				-0.6
3,112,275	-		ABIE40_RS15690	0.10	-0.9
3,112,919	+		ABIE40_RS15695	0.20	-0.9
3,112,920	-		ABIE40_RS15695	0.20	-0.6
3,112,920	-		ABIE40_RS15695	0.20	-2.3
3,112,920	-		ABIE40_RS15695	0.20	+0.7
3,112,920	-		ABIE40_RS15695	0.20	+0.2
3,112,925	+		ABIE40_RS15695	0.21	-0.6
3,112,926	-		ABIE40_RS15695	0.22	-0.5
3,112,926	-		ABIE40_RS15695	0.22	+0.1
3,112,926	-		ABIE40_RS15695	0.22	+1.9
3,112,926	-		ABIE40_RS15695	0.22	-1.5
3,112,952	+		ABIE40_RS15695	0.27	-0.6
3,112,952	+		ABIE40_RS15695	0.27	-0.4
3,112,952	+		ABIE40_RS15695	0.27	-0.2
3,112,953	-		ABIE40_RS15695	0.27	-0.9
3,113,066	+		ABIE40_RS15695	0.50	-0.1
3,113,113	+		ABIE40_RS15695	0.60	+0.7
3,113,113	+		ABIE40_RS15695	0.60	+1.9
3,113,114	-		ABIE40_RS15695	0.60	+2.5
3,113,114	-		ABIE40_RS15695	0.60	-0.8
3,113,242	+		ABIE40_RS15695	0.86	-0.8
3,113,249	+		ABIE40_RS15695	0.88	+0.6
3,113,249	+		ABIE40_RS15695	0.88	-0.7
3,113,249	+		ABIE40_RS15695	0.88	+0.1
3,113,249	-		ABIE40_RS15695	0.88	-0.3
3,113,250	-		ABIE40_RS15695	0.88	+1.4
3,113,250	-		ABIE40_RS15695	0.88	+0.2
3,113,250	-		ABIE40_RS15695	0.88	+0.1
3,113,250	-		ABIE40_RS15695	0.88	+0.2
3,113,250	-		ABIE40_RS15695	0.88	-0.3
3,113,250	-		ABIE40_RS15695	0.88	-0.6
3,113,250	-		ABIE40_RS15695	0.88	-1.7
3,113,250	-		ABIE40_RS15695	0.88	-0.7
3,113,250	-		ABIE40_RS15695	0.88	-0.7
3,113,255	+		ABIE40_RS15695	0.89	-1.5
3,113,255	+		ABIE40_RS15695	0.89	+0.1
3,113,255	+		ABIE40_RS15695	0.89	-0.3
3,113,255	+		ABIE40_RS15695	0.89	+0.0
3,113,256	-		ABIE40_RS15695	0.89	+0.0
3,113,350	+				-2.7
3,113,351	-				+0.7
3,113,509	-		ABIE40_RS15700	0.36	+1.0
3,113,526	+		ABIE40_RS15700	0.39	+1.6
3,113,527	-		ABIE40_RS15700	0.39	-0.2
3,113,527	-		ABIE40_RS15700	0.39	-0.5
3,113,565	+		ABIE40_RS15700	0.46	+0.3
3,113,747	+		ABIE40_RS15700	0.79	+1.6
3,113,748	-		ABIE40_RS15700	0.79	-1.6
3,113,839	-				+0.3
3,113,862	+				-0.9
3,113,863	-				+0.6
3,114,030	+		ABIE40_RS15705	0.17	-1.4
3,114,031	-		ABIE40_RS15705	0.17	-0.2
3,114,031	-		ABIE40_RS15705	0.17	-0.7
3,114,085	+		ABIE40_RS15705	0.22	-0.9
3,114,085	+		ABIE40_RS15705	0.22	-1.1
3,114,165	+		ABIE40_RS15705	0.30	-0.4
3,114,219	+		ABIE40_RS15705	0.36	-0.9
3,114,219	+		ABIE40_RS15705	0.36	+1.1
3,114,219	+		ABIE40_RS15705	0.36	+0.9
3,114,219	+		ABIE40_RS15705	0.36	-0.2
3,114,220	-		ABIE40_RS15705	0.36	+3.3
3,114,220	-		ABIE40_RS15705	0.36	-0.3
3,114,220	-		ABIE40_RS15705	0.36	+0.9
3,114,220	-		ABIE40_RS15705	0.36	-0.3
3,114,220	-		ABIE40_RS15705	0.36	-2.4
3,114,220	-		ABIE40_RS15705	0.36	-0.1
3,114,220	-		ABIE40_RS15705	0.36	+0.9
3,114,220	-		ABIE40_RS15705	0.36	-0.3
3,114,220	-		ABIE40_RS15705	0.36	-0.6
3,114,261	+		ABIE40_RS15705	0.40	+0.1
3,114,261	+		ABIE40_RS15705	0.40	+1.0
3,114,261	+		ABIE40_RS15705	0.40	-0.9
3,114,261	+		ABIE40_RS15705	0.40	-0.6
3,114,261	+		ABIE40_RS15705	0.40	+0.4
3,114,262	-		ABIE40_RS15705	0.40	+0.3
3,114,262	-		ABIE40_RS15705	0.40	-0.7
3,114,262	-		ABIE40_RS15705	0.40	+1.6
3,114,265	+		ABIE40_RS15705	0.40	+1.9
3,114,265	+		ABIE40_RS15705	0.40	+2.3
3,114,265	+		ABIE40_RS15705	0.40	-0.5
3,114,265	+		ABIE40_RS15705	0.40	+1.0
3,114,265	+		ABIE40_RS15705	0.40	+0.7
3,114,266	-		ABIE40_RS15705	0.40	-0.4
3,114,266	-		ABIE40_RS15705	0.40	-0.8
3,114,266	-		ABIE40_RS15705	0.40	+1.3
3,114,266	-		ABIE40_RS15705	0.40	-0.4
3,114,266	-		ABIE40_RS15705	0.40	-1.3
3,114,266	-		ABIE40_RS15705	0.40	-1.0