Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS08625

Experiment: R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with 6-Pentyl-2H-pyran-2-one 1.00268716666667 mM
1,662,752	+		ABIE40_RS08615	0.83	-0.6
1,662,752	+		ABIE40_RS08615	0.83	-0.3
1,662,753	-		ABIE40_RS08615	0.83	-1.7
1,662,758	+		ABIE40_RS08615	0.84	+0.5
1,662,758	+		ABIE40_RS08615	0.84	-0.2
1,662,758	+		ABIE40_RS08615	0.84	-2.2
1,662,758	+		ABIE40_RS08615	0.84	-0.3
1,662,758	+		ABIE40_RS08615	0.84	+0.4
1,662,758	+		ABIE40_RS08615	0.84	+0.2
1,662,758	+		ABIE40_RS08615	0.84	+2.3
1,662,758	+		ABIE40_RS08615	0.84	+0.5
1,662,758	+		ABIE40_RS08615	0.84	+0.0
1,662,758	+		ABIE40_RS08615	0.84	+2.4
1,662,758	+		ABIE40_RS08615	0.84	+0.6
1,662,759	-		ABIE40_RS08615	0.84	-1.4
1,662,759	-		ABIE40_RS08615	0.84	+0.1
1,662,759	-		ABIE40_RS08615	0.84	-1.8
1,662,759	-		ABIE40_RS08615	0.84	+0.4
1,662,759	-		ABIE40_RS08615	0.84	-0.4
1,662,759	-		ABIE40_RS08615	0.84	-0.3
1,662,759	-		ABIE40_RS08615	0.84	-1.1
1,662,761	+		ABIE40_RS08615	0.84	+0.8
1,662,761	+		ABIE40_RS08615	0.84	-1.0
1,662,761	+		ABIE40_RS08615	0.84	+0.4
1,662,761	+		ABIE40_RS08615	0.84	-0.8
1,662,863	-				-2.7
1,662,884	+				+1.2
1,662,885	-				-0.6
1,662,922	+				-0.2
1,662,922	+				-0.1
1,662,923	-				-0.7
1,662,923	-				-1.6
1,662,923	-				-0.8
1,663,275	+		ABIE40_RS08620	0.42	-0.3
1,663,275	+		ABIE40_RS08620	0.42	+0.3
1,663,275	+		ABIE40_RS08620	0.42	-0.3
1,663,276	-		ABIE40_RS08620	0.42	-0.3
1,663,276	-		ABIE40_RS08620	0.42	-1.4
1,663,276	-		ABIE40_RS08620	0.42	-0.4
1,663,276	-		ABIE40_RS08620	0.42	-1.2
1,663,276	-		ABIE40_RS08620	0.42	+0.4
1,663,397	+		ABIE40_RS08620	0.57	-1.3
1,663,398	-		ABIE40_RS08620	0.57	-1.0
1,663,574	+		ABIE40_RS08620	0.79	+1.0
1,663,574	+		ABIE40_RS08620	0.79	-0.9
1,663,574	+		ABIE40_RS08620	0.79	+0.3
1,663,574	+		ABIE40_RS08620	0.79	-2.8
1,663,575	-		ABIE40_RS08620	0.79	-0.6
1,663,575	-		ABIE40_RS08620	0.79	+0.4
1,663,575	-		ABIE40_RS08620	0.79	-1.4
1,663,575	-		ABIE40_RS08620	0.79	+1.0
1,663,596	+		ABIE40_RS08620	0.82	-2.2
1,663,597	-		ABIE40_RS08620	0.82	-1.0
1,663,597	-		ABIE40_RS08620	0.82	+0.7
1,663,597	-		ABIE40_RS08620	0.82	-0.9
1,663,597	-		ABIE40_RS08620	0.82	+0.7
1,663,840	+		ABIE40_RS08625	0.11	-1.3
1,663,841	+		ABIE40_RS08625	0.11	+1.0
1,663,841	+		ABIE40_RS08625	0.11	-0.6
1,663,841	+		ABIE40_RS08625	0.11	-1.6
1,663,841	+		ABIE40_RS08625	0.11	-1.9
1,663,842	-		ABIE40_RS08625	0.11	+0.3
1,663,842	-		ABIE40_RS08625	0.11	+0.8
1,663,842	-		ABIE40_RS08625	0.11	-0.2
1,663,842	-		ABIE40_RS08625	0.11	-1.6
1,663,849	+		ABIE40_RS08625	0.12	-2.5
1,663,850	-		ABIE40_RS08625	0.12	-1.6
1,663,993	+		ABIE40_RS08625	0.29	-3.4
1,663,994	-		ABIE40_RS08625	0.29	-0.7
1,663,994	-		ABIE40_RS08625	0.29	-2.5
1,664,003	+		ABIE40_RS08625	0.30	-0.8
1,664,004	-		ABIE40_RS08625	0.30	-0.6
1,664,083	+		ABIE40_RS08625	0.40	-0.1
1,664,084	-		ABIE40_RS08625	0.40	-2.7
1,664,084	-		ABIE40_RS08625	0.40	+0.4
1,664,212	+		ABIE40_RS08625	0.55	+0.5
1,664,213	-		ABIE40_RS08625	0.55	-1.0
1,664,213	-		ABIE40_RS08625	0.55	-1.3
1,664,306	+		ABIE40_RS08625	0.66	-0.8
1,664,306	+		ABIE40_RS08625	0.66	-0.9
1,664,306	+		ABIE40_RS08625	0.66	-2.8
1,664,306	+		ABIE40_RS08625	0.66	-0.8
1,664,307	-		ABIE40_RS08625	0.66	-3.5
1,664,307	-		ABIE40_RS08625	0.66	+2.0
1,664,307	-		ABIE40_RS08625	0.66	-1.4
1,664,307	-		ABIE40_RS08625	0.66	-2.4
1,664,307	-		ABIE40_RS08625	0.66	-0.3
1,664,351	+		ABIE40_RS08625	0.72	-1.3
1,664,352	-		ABIE40_RS08625	0.72	-1.8
1,664,352	-		ABIE40_RS08625	0.72	-0.9
1,664,362	+		ABIE40_RS08625	0.73	-0.1
1,664,401	+		ABIE40_RS08625	0.78	-0.3
1,664,527	+				-1.1
1,664,527	+				-1.0
1,664,528	-				-0.8
1,664,547	-				+2.4
1,664,577	-				+0.0
1,664,578	+				-2.7
1,664,578	+				+1.3
1,664,578	+				-1.7
1,664,578	+				-1.0
1,664,579	-				-1.1
1,664,579	-				-2.4
1,664,579	-				+0.0
1,664,579	-				-1.6
1,664,579	-				+0.4
1,664,579	-				+0.4
1,664,579	-				-0.2
1,664,600	-				-2.1
1,664,620	+				-1.5
1,664,620	+				+0.4
1,664,620	+				+0.1
1,664,621	-				-2.3
1,664,624	+				+0.1
1,664,625	-				-0.2
1,664,625	-				+0.9
1,664,625	-				-1.6
1,664,625	-				+1.0
1,664,625	-				-0.9
1,664,625	-				-0.2
1,664,633	+				-1.3
1,664,633	+				-0.5
1,664,634	-				-0.4
1,664,810	-				+0.8
1,664,810	-				+1.2
1,664,810	-				+1.1
1,664,811	+				+0.1
1,664,812	-				+0.9
1,664,874	+		ABIE40_RS08630	0.10	-2.2
1,664,875	-		ABIE40_RS08630	0.10	+1.0
1,664,875	-		ABIE40_RS08630	0.10	+0.7
1,664,875	-		ABIE40_RS08630	0.10	+1.0
1,664,875	-		ABIE40_RS08630	0.10	+2.1
1,664,875	-		ABIE40_RS08630	0.10	+0.2
1,664,925	+		ABIE40_RS08630	0.14	-0.1
1,664,925	+		ABIE40_RS08630	0.14	+0.2
1,664,925	+		ABIE40_RS08630	0.14	+0.1
1,664,925	+		ABIE40_RS08630	0.14	-1.0
1,664,926	-		ABIE40_RS08630	0.14	+0.4
1,664,926	-		ABIE40_RS08630	0.14	+0.7
1,664,926	-		ABIE40_RS08630	0.14	+0.7
1,664,926	-		ABIE40_RS08630	0.14	+0.2
1,665,034	+		ABIE40_RS08630	0.23	-1.3
1,665,034	+		ABIE40_RS08630	0.23	-2.4
1,665,035	-		ABIE40_RS08630	0.23	+0.3
1,665,035	-		ABIE40_RS08630	0.23	-1.2
1,665,035	-		ABIE40_RS08630	0.23	+0.7
1,665,035	-		ABIE40_RS08630	0.23	-0.2
1,665,036	+		ABIE40_RS08630	0.23	-2.0
1,665,036	+		ABIE40_RS08630	0.23	-0.4
1,665,036	+		ABIE40_RS08630	0.23	+0.7
1,665,036	+		ABIE40_RS08630	0.23	-0.2
1,665,036	+		ABIE40_RS08630	0.23	-0.4
1,665,036	+		ABIE40_RS08630	0.23	+0.3
1,665,036	+		ABIE40_RS08630	0.23	+0.8
1,665,036	+		ABIE40_RS08630	0.23	+1.0
1,665,036	+		ABIE40_RS08630	0.23	-2.3
1,665,036	+		ABIE40_RS08630	0.23	-0.1
1,665,036	+		ABIE40_RS08630	0.23	-2.0
1,665,036	+		ABIE40_RS08630	0.23	-0.8
1,665,037	-		ABIE40_RS08630	0.23	+0.0
1,665,037	-		ABIE40_RS08630	0.23	+0.5
1,665,037	-		ABIE40_RS08630	0.23	-0.8
1,665,037	-		ABIE40_RS08630	0.23	+0.4
1,665,037	-		ABIE40_RS08630	0.23	+1.1
1,665,037	-		ABIE40_RS08630	0.23	+0.2
1,665,037	-		ABIE40_RS08630	0.23	-0.8
1,665,037	-		ABIE40_RS08630	0.23	-2.6
1,665,037	-		ABIE40_RS08630	0.23	+1.8
1,665,037	-		ABIE40_RS08630	0.23	+1.1
1,665,037	-		ABIE40_RS08630	0.23	+0.6
1,665,040	+		ABIE40_RS08630	0.23	-0.8
1,665,040	+		ABIE40_RS08630	0.23	-1.7
1,665,040	+		ABIE40_RS08630	0.23	-0.8
1,665,041	-		ABIE40_RS08630	0.23	+0.1
1,665,041	-		ABIE40_RS08630	0.23	+0.4
1,665,144	+		ABIE40_RS08630	0.31	-0.3
1,665,144	+		ABIE40_RS08630	0.31	-0.9
1,665,144	+		ABIE40_RS08630	0.31	+0.1
1,665,144	+		ABIE40_RS08630	0.31	-0.0
1,665,144	+		ABIE40_RS08630	0.31	-1.6
1,665,145	-		ABIE40_RS08630	0.32	+0.0
1,665,145	-		ABIE40_RS08630	0.32	+0.6
1,665,145	-		ABIE40_RS08630	0.32	-4.4
1,665,145	-		ABIE40_RS08630	0.32	-0.7
1,665,145	-		ABIE40_RS08630	0.32	-1.3
1,665,169	-		ABIE40_RS08630	0.33	+0.3
1,665,239	-		ABIE40_RS08630	0.39	+0.6
1,665,239	-		ABIE40_RS08630	0.39	-1.3
1,665,262	-		ABIE40_RS08630	0.41	+0.8
1,665,262	-		ABIE40_RS08630	0.41	+0.6
1,665,329	+		ABIE40_RS08630	0.46	-2.0
1,665,329	+		ABIE40_RS08630	0.46	+0.4
1,665,330	-		ABIE40_RS08630	0.46	-0.3
1,665,330	-		ABIE40_RS08630	0.46	+0.1