Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_892

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
999,519	-				+1.6
999,519	-				+0.5
999,778	+		PfGW456L13_890	0.25	-0.8
999,779	-		PfGW456L13_890	0.26	+0.6
999,819	+		PfGW456L13_890	0.34	-0.8
999,819	+		PfGW456L13_890	0.34	-0.9
999,819	+		PfGW456L13_890	0.34	+0.7
999,819	+		PfGW456L13_890	0.34	-0.7
999,819	+		PfGW456L13_890	0.34	+0.5
999,820	-		PfGW456L13_890	0.35	-0.0
999,820	-		PfGW456L13_890	0.35	+1.4
999,820	-		PfGW456L13_890	0.35	-0.3
999,820	-		PfGW456L13_890	0.35	+0.5
999,820	-		PfGW456L13_890	0.35	-0.1
999,820	-		PfGW456L13_890	0.35	-0.6
999,845	+		PfGW456L13_890	0.40	+0.1
999,860	+		PfGW456L13_890	0.43	-0.6
999,871	+		PfGW456L13_890	0.46	+1.4
999,967	+		PfGW456L13_890	0.67	-2.1
999,968	-		PfGW456L13_890	0.67	+0.6
1,000,021	+		PfGW456L13_890	0.79	-1.3
1,000,232	+				-2.1
1,000,257	+				+0.7
1,000,330	+		PfGW456L13_891	0.12	+1.6
1,000,331	-		PfGW456L13_891	0.13	+0.6
1,000,331	-		PfGW456L13_891	0.13	+0.5
1,000,331	-		PfGW456L13_891	0.13	+0.5
1,000,334	-		PfGW456L13_891	0.15	-0.7
1,000,334	-		PfGW456L13_891	0.15	-0.2
1,000,393	+		PfGW456L13_891	0.53	+0.1
1,000,394	-		PfGW456L13_891	0.53	-1.8
1,000,394	-		PfGW456L13_891	0.53	-0.1
1,000,394	-		PfGW456L13_891	0.53	+1.1
1,000,512	+				-1.0
1,000,515	+				-4.7
1,000,516	-				-3.6
1,000,516	-				-2.3
1,000,516	-				-2.7
1,000,516	-				-4.7
1,000,516	-				-2.5
1,000,647	+		PfGW456L13_892	0.24	-2.6
1,000,648	-		PfGW456L13_892	0.24	-2.4
1,000,665	+		PfGW456L13_892	0.27	-2.1
1,000,666	-		PfGW456L13_892	0.27	-2.6
1,000,786	+		PfGW456L13_892	0.47	-1.8
1,000,872	-		PfGW456L13_892	0.61	-3.5
1,000,875	+		PfGW456L13_892	0.62	-2.2
1,000,875	+		PfGW456L13_892	0.62	-1.2
1,000,875	+		PfGW456L13_892	0.62	-3.3
1,000,875	+		PfGW456L13_892	0.62	-1.8
1,000,875	+		PfGW456L13_892	0.62	-3.2
1,000,875	+		PfGW456L13_892	0.62	-3.1
1,000,875	+		PfGW456L13_892	0.62	-3.1
1,000,875	+		PfGW456L13_892	0.62	-3.3
1,000,875	+		PfGW456L13_892	0.62	-3.3
1,000,875	+		PfGW456L13_892	0.62	-0.0
1,000,875	+		PfGW456L13_892	0.62	-4.0
1,000,875	+		PfGW456L13_892	0.62	-3.3
1,000,875	+		PfGW456L13_892	0.62	-2.8
1,000,876	-		PfGW456L13_892	0.62	-4.6
1,000,876	-		PfGW456L13_892	0.62	-3.7
1,000,876	-		PfGW456L13_892	0.62	-2.0
1,000,876	-		PfGW456L13_892	0.62	-2.7
1,000,876	-		PfGW456L13_892	0.62	-1.0
1,000,876	-		PfGW456L13_892	0.62	-2.2
1,000,876	-		PfGW456L13_892	0.62	-2.9
1,000,876	-		PfGW456L13_892	0.62	-3.3
1,000,876	-		PfGW456L13_892	0.62	-2.5
1,000,876	-		PfGW456L13_892	0.62	-3.1
1,000,876	-		PfGW456L13_892	0.62	-4.6
1,000,876	-		PfGW456L13_892	0.62	-4.3
1,000,876	-		PfGW456L13_892	0.62	-1.9
1,000,876	-		PfGW456L13_892	0.62	-2.3
1,000,876	-		PfGW456L13_892	0.62	-3.3
1,000,948	-		PfGW456L13_892	0.74	-2.8
1,000,948	-		PfGW456L13_892	0.74	-2.9
1,001,001	+		PfGW456L13_892	0.82	-3.3
1,001,001	+		PfGW456L13_892	0.82	-1.7
1,001,002	-		PfGW456L13_892	0.83	-3.8
1,001,002	-		PfGW456L13_892	0.83	-3.1
1,001,002	-		PfGW456L13_892	0.83	-1.9
1,001,002	-		PfGW456L13_892	0.83	+0.4
1,001,109	+				-2.4
1,001,109	+				-2.1
1,001,109	+				-2.5
1,001,109	+				-2.5
1,001,110	-				-0.2
1,001,143	+				-0.2
1,001,150	-				-0.5
1,001,222	+				-0.3
1,001,222	+				-0.1
1,001,223	-				-0.7
1,001,223	-				+0.3
1,001,260	+				+0.5
1,001,261	-				-0.7
1,001,261	-				+0.5
1,001,261	-				-0.2
1,001,261	-				+0.9
1,001,281	+				-0.4
1,001,321	+				+1.1
1,001,322	-				+0.7
1,001,322	-				-0.3
1,001,323	+				+0.4
1,001,323	+				-0.9
1,001,323	+				+0.8
1,001,323	+				+0.4
1,001,323	+				-1.3
1,001,324	-				+0.0
1,001,324	-				+0.0
1,001,324	-				+0.3
1,001,380	+				+0.9
1,001,380	+				+0.5
1,001,381	-				+0.3
1,001,381	-				+0.7
1,001,381	-				-0.8
1,001,381	-				-0.3
1,001,381	-				+0.1
1,001,381	-				+0.5
1,001,381	-				+0.8
1,001,382	+				+0.5
1,001,383	-				+0.1
1,001,620	+		PfGW456L13_893	0.68	-0.0
1,001,621	-		PfGW456L13_893	0.69	+1.0
1,001,643	-		PfGW456L13_893	0.75	-0.0
1,001,674	+		PfGW456L13_893	0.85	-0.2
1,001,674	+		PfGW456L13_893	0.85	+0.4
1,001,674	+		PfGW456L13_893	0.85	-0.2
1,001,674	+		PfGW456L13_893	0.85	-0.5
1,001,674	+		PfGW456L13_893	0.85	+0.4
1,001,674	+		PfGW456L13_893	0.85	+1.0
1,001,705	+				+0.1
1,001,705	+				+0.0
1,001,706	-				-0.5
1,001,767	+		PfGW456L13_894	0.24	+1.4
1,001,767	+		PfGW456L13_894	0.24	+1.0
1,001,767	+		PfGW456L13_894	0.24	-0.4
1,001,834	+		PfGW456L13_894	0.56	-0.9
1,001,834	+		PfGW456L13_894	0.56	-2.1
1,001,834	+		PfGW456L13_894	0.56	-1.0
1,001,834	+		PfGW456L13_894	0.56	+1.1
1,001,834	+		PfGW456L13_894	0.56	+0.7
1,001,834	+		PfGW456L13_894	0.56	+0.5
1,001,834	+		PfGW456L13_894	0.56	+0.5
1,001,834	+		PfGW456L13_894	0.56	+0.5
1,001,835	-		PfGW456L13_894	0.56	+1.2
1,001,835	-		PfGW456L13_894	0.56	+0.6
1,001,835	-		PfGW456L13_894	0.56	+0.3
1,001,835	-		PfGW456L13_894	0.56	-0.4
1,001,835	-		PfGW456L13_894	0.56	-1.3
1,001,835	-		PfGW456L13_894	0.56	-0.9
1,001,835	-		PfGW456L13_894	0.56	+1.0
1,001,835	-		PfGW456L13_894	0.56	-1.1
1,001,835	-		PfGW456L13_894	0.56	-0.7
1,001,835	-		PfGW456L13_894	0.56	-0.2
1,001,835	-		PfGW456L13_894	0.56	+0.3
1,001,835	-		PfGW456L13_894	0.56	+0.9
1,001,837	+		PfGW456L13_894	0.57	-0.4
1,001,837	+		PfGW456L13_894	0.57	+0.0
1,001,837	+		PfGW456L13_894	0.57	+1.8
1,001,837	+		PfGW456L13_894	0.57	+1.1
1,001,837	+		PfGW456L13_894	0.57	+1.7
1,001,837	+		PfGW456L13_894	0.57	+0.6
1,001,837	+		PfGW456L13_894	0.57	+0.1
1,001,837	+		PfGW456L13_894	0.57	+0.6
1,001,838	-		PfGW456L13_894	0.58	-0.1
1,001,838	-		PfGW456L13_894	0.58	-0.8
1,001,838	-		PfGW456L13_894	0.58	-0.5
1,001,857	+		PfGW456L13_894	0.67	+0.6
1,001,857	+		PfGW456L13_894	0.67	+0.2
1,001,857	+		PfGW456L13_894	0.67	-0.3
1,001,857	+		PfGW456L13_894	0.67	-0.9
1,001,857	+		PfGW456L13_894	0.67	-0.5
1,001,858	-		PfGW456L13_894	0.67	+0.9
1,001,858	-		PfGW456L13_894	0.67	-0.8
1,001,858	-		PfGW456L13_894	0.67	+0.4
1,001,858	-		PfGW456L13_894	0.67	-0.3
1,001,858	-		PfGW456L13_894	0.67	+0.3
1,001,858	-		PfGW456L13_894	0.67	+1.2
1,001,858	-		PfGW456L13_894	0.67	+1.2
1,001,858	-		PfGW456L13_894	0.67	+0.6
1,001,858	-		PfGW456L13_894	0.67	-1.3
1,001,858	-		PfGW456L13_894	0.67	+1.0
1,001,957	+				-0.1
1,001,957	+				+0.4
1,001,957	+				+1.7
1,001,958	-				+0.1
1,001,958	-				-0.5
1,001,958	-				+0.5
1,002,008	-				+0.1
1,002,052	-				-0.2
1,002,052	-				-0.9
1,002,059	+				-0.4
1,002,060	-				+0.5
1,002,068	+				+1.1
1,002,068	+				+0.9
1,002,068	+				+0.2
1,002,068	+				+0.2
1,002,068	+				+0.3
1,002,068	+				-0.3
1,002,068	+				-0.7
1,002,068	+				-1.0
1,002,069	-				-1.3
1,002,069	-				-0.1
1,002,069	-				-0.8
1,002,073	+				-0.1
1,002,073	+				+0.2
1,002,073	+				+0.2
1,002,073	+				+0.7
1,002,073	+				-0.8
1,002,089	+				+0.5
1,002,089	+				-0.3
1,002,090	-				+0.4
1,002,090	-				+1.0
1,002,095	+				-1.2
1,002,095	+				+0.3
1,002,095	+				-2.8
1,002,096	-				+0.2