Experiment: nitrate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_848 and PfGW456L13_849 are separated by 490 nucleotides PfGW456L13_849 and PfGW456L13_850 are separated by 7 nucleotides PfGW456L13_850 and PfGW456L13_851 are separated by 194 nucleotides PfGW456L13_851 and PfGW456L13_852 are separated by 209 nucleotides
PfGW456L13_848 - Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly, at 953,906 to 954,238
_848
PfGW456L13_849 - Regulator of nucleoside diphosphate kinase, at 954,729 to 955,139
_849
PfGW456L13_850 - Adenylate cyclase (EC 4.6.1.1), at 955,147 to 957,990
_850
PfGW456L13_851 - DNA-binding protein inhibitor Id-2-related protein, at 958,185 to 958,430
_851
PfGW456L13_852 - FIG00954215: hypothetical protein, at 958,640 to 958,924
_852
Position (kb) 955
956
957
958 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 954.190 kb on + strand, within PfGW456L13_848 at 954.190 kb on + strand, within PfGW456L13_848 at 954.191 kb on - strand, within PfGW456L13_848 at 954.191 kb on - strand, within PfGW456L13_848 at 954.283 kb on - strand at 954.283 kb on - strand at 954.380 kb on + strand at 954.380 kb on + strand at 954.381 kb on - strand at 954.381 kb on - strand at 954.381 kb on - strand at 954.413 kb on + strand at 954.413 kb on + strand at 954.414 kb on - strand at 954.460 kb on - strand at 954.460 kb on - strand at 954.573 kb on + strand at 954.573 kb on + strand at 954.573 kb on + strand at 954.573 kb on + strand at 954.574 kb on - strand at 954.574 kb on - strand at 954.608 kb on - strand at 954.608 kb on - strand at 954.610 kb on - strand at 954.627 kb on - strand at 954.939 kb on + strand, within PfGW456L13_849 at 954.940 kb on - strand, within PfGW456L13_849 at 954.940 kb on - strand, within PfGW456L13_849 at 954.940 kb on - strand, within PfGW456L13_849 at 955.205 kb on + strand at 955.205 kb on + strand at 955.206 kb on - strand at 955.206 kb on - strand at 955.206 kb on - strand at 955.206 kb on - strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.374 kb on - strand at 955.374 kb on - strand at 955.374 kb on - strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.517 kb on + strand, within PfGW456L13_850 at 955.517 kb on + strand, within PfGW456L13_850 at 955.517 kb on + strand, within PfGW456L13_850 at 955.577 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.708 kb on - strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.710 kb on - strand, within PfGW456L13_850 at 955.710 kb on - strand, within PfGW456L13_850 at 955.710 kb on - strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.898 kb on + strand, within PfGW456L13_850 at 955.898 kb on + strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 956.069 kb on + strand, within PfGW456L13_850 at 956.070 kb on - strand, within PfGW456L13_850 at 956.189 kb on + strand, within PfGW456L13_850 at 956.190 kb on - strand, within PfGW456L13_850 at 956.190 kb on - strand, within PfGW456L13_850 at 956.540 kb on + strand, within PfGW456L13_850 at 956.540 kb on + strand, within PfGW456L13_850 at 956.541 kb on - strand, within PfGW456L13_850 at 956.541 kb on - strand, within PfGW456L13_850 at 956.649 kb on + strand, within PfGW456L13_850 at 956.675 kb on + strand, within PfGW456L13_850 at 956.768 kb on + strand, within PfGW456L13_850 at 956.768 kb on + strand, within PfGW456L13_850 at 956.768 kb on + strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.955 kb on - strand, within PfGW456L13_850 at 956.955 kb on - strand, within PfGW456L13_850 at 956.955 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.027 kb on - strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.131 kb on + strand, within PfGW456L13_850 at 957.131 kb on + strand, within PfGW456L13_850 at 957.132 kb on - strand, within PfGW456L13_850 at 957.168 kb on - strand, within PfGW456L13_850 at 957.233 kb on + strand, within PfGW456L13_850 at 957.233 kb on + strand, within PfGW456L13_850 at 957.233 kb on + strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.312 kb on - strand, within PfGW456L13_850 at 957.326 kb on + strand, within PfGW456L13_850 at 957.327 kb on - strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.698 kb on + strand, within PfGW456L13_850 at 957.698 kb on + strand, within PfGW456L13_850 at 957.698 kb on + strand, within PfGW456L13_850 at 957.699 kb on - strand, within PfGW456L13_850 at 957.699 kb on - strand, within PfGW456L13_850 at 957.791 kb on + strand at 957.791 kb on + strand at 957.792 kb on - strand at 958.050 kb on - strand at 958.073 kb on - strand at 958.194 kb on + strand at 958.194 kb on + strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.422 kb on - strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.449 kb on - strand at 958.529 kb on + strand at 958.530 kb on - strand at 958.530 kb on - strand at 958.570 kb on + strand at 958.571 kb on - strand at 958.623 kb on + strand at 958.624 kb on - strand at 958.641 kb on + strand at 958.642 kb on - strand at 958.690 kb on - strand, within PfGW456L13_852 at 958.785 kb on + strand, within PfGW456L13_852
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate (N) remove 954,190 + PfGW456L13_848 0.85 -0.8 954,190 + PfGW456L13_848 0.85 -2.4 954,191 - PfGW456L13_848 0.86 -0.0 954,191 - PfGW456L13_848 0.86 -0.1 954,283 - +0.5 954,283 - -0.2 954,380 + -1.2 954,380 + +0.4 954,381 - +0.6 954,381 - -1.2 954,381 - -1.8 954,413 + +0.4 954,413 + +0.4 954,414 - -0.2 954,460 - -0.6 954,460 - +0.5 954,573 + -0.4 954,573 + -1.3 954,573 + +0.1 954,573 + -0.4 954,574 - -0.0 954,574 - -1.4 954,608 - +0.1 954,608 - +0.2 954,610 - +0.7 954,627 - -0.6 954,939 + PfGW456L13_849 0.51 -2.7 954,940 - PfGW456L13_849 0.51 -1.1 954,940 - PfGW456L13_849 0.51 -0.7 954,940 - PfGW456L13_849 0.51 -1.8 955,205 + +0.9 955,205 + +0.0 955,206 - +0.1 955,206 - +0.3 955,206 - -0.7 955,206 - -0.5 955,265 + +0.4 955,265 + -0.3 955,265 + -0.2 955,265 + -0.1 955,265 + -0.2 955,265 + -0.3 955,266 - -0.7 955,266 - +1.3 955,266 - +0.4 955,266 - -0.1 955,266 - +0.4 955,266 - -0.9 955,266 - -0.0 955,374 - -0.8 955,374 - +0.0 955,374 - +1.3 955,430 + -0.7 955,430 + -0.4 955,430 + -0.4 955,430 + +1.4 955,430 + -0.4 955,517 + PfGW456L13_850 0.13 +0.8 955,517 + PfGW456L13_850 0.13 +0.3 955,517 + PfGW456L13_850 0.13 -0.3 955,577 + PfGW456L13_850 0.15 -0.0 955,679 + PfGW456L13_850 0.19 -1.2 955,679 + PfGW456L13_850 0.19 -0.7 955,679 + PfGW456L13_850 0.19 +0.5 955,679 + PfGW456L13_850 0.19 -0.1 955,679 + PfGW456L13_850 0.19 +0.8 955,680 - PfGW456L13_850 0.19 +1.5 955,680 - PfGW456L13_850 0.19 -3.1 955,680 - PfGW456L13_850 0.19 +0.6 955,680 - PfGW456L13_850 0.19 +0.0 955,680 - PfGW456L13_850 0.19 +0.2 955,680 - PfGW456L13_850 0.19 -0.1 955,708 - PfGW456L13_850 0.20 -1.9 955,709 + PfGW456L13_850 0.20 +0.3 955,709 + PfGW456L13_850 0.20 -0.8 955,709 + PfGW456L13_850 0.20 +0.6 955,709 + PfGW456L13_850 0.20 +0.1 955,709 + PfGW456L13_850 0.20 +0.5 955,709 + PfGW456L13_850 0.20 +0.1 955,709 + PfGW456L13_850 0.20 -0.2 955,709 + PfGW456L13_850 0.20 +0.7 955,709 + PfGW456L13_850 0.20 +0.3 955,709 + PfGW456L13_850 0.20 -0.0 955,709 + PfGW456L13_850 0.20 +0.7 955,710 - PfGW456L13_850 0.20 -0.1 955,710 - PfGW456L13_850 0.20 -1.3 955,710 - PfGW456L13_850 0.20 -0.3 955,802 + PfGW456L13_850 0.23 +0.8 955,802 + PfGW456L13_850 0.23 -0.2 955,802 + PfGW456L13_850 0.23 -0.1 955,802 + PfGW456L13_850 0.23 -0.2 955,898 + PfGW456L13_850 0.26 -1.0 955,898 + PfGW456L13_850 0.26 +0.3 955,899 - PfGW456L13_850 0.26 +0.0 955,899 - PfGW456L13_850 0.26 +1.0 955,899 - PfGW456L13_850 0.26 -0.9 955,899 - PfGW456L13_850 0.26 +0.4 956,069 + PfGW456L13_850 0.32 +0.3 956,070 - PfGW456L13_850 0.32 -1.3 956,189 + PfGW456L13_850 0.37 -0.7 956,190 - PfGW456L13_850 0.37 -0.1 956,190 - PfGW456L13_850 0.37 +0.6 956,540 + PfGW456L13_850 0.49 +0.1 956,540 + PfGW456L13_850 0.49 -0.2 956,541 - PfGW456L13_850 0.49 +0.9 956,541 - PfGW456L13_850 0.49 -1.0 956,649 + PfGW456L13_850 0.53 -0.1 956,675 + PfGW456L13_850 0.54 -0.7 956,768 + PfGW456L13_850 0.57 +0.3 956,768 + PfGW456L13_850 0.57 +0.8 956,768 + PfGW456L13_850 0.57 -0.3 956,769 - PfGW456L13_850 0.57 +0.3 956,769 - PfGW456L13_850 0.57 +1.0 956,769 - PfGW456L13_850 0.57 -0.3 956,769 - PfGW456L13_850 0.57 -0.0 956,769 - PfGW456L13_850 0.57 +2.0 956,769 - PfGW456L13_850 0.57 +0.5 956,769 - PfGW456L13_850 0.57 -0.5 956,769 - PfGW456L13_850 0.57 -0.4 956,955 - PfGW456L13_850 0.64 +0.4 956,955 - PfGW456L13_850 0.64 -0.6 956,955 - PfGW456L13_850 0.64 +0.5 957,009 - PfGW456L13_850 0.65 -0.1 957,009 - PfGW456L13_850 0.65 -0.0 957,009 - PfGW456L13_850 0.65 -0.0 957,009 - PfGW456L13_850 0.65 +1.1 957,027 - PfGW456L13_850 0.66 +0.4 957,038 + PfGW456L13_850 0.66 +0.1 957,038 + PfGW456L13_850 0.66 +0.5 957,038 + PfGW456L13_850 0.66 -0.3 957,038 + PfGW456L13_850 0.66 +0.2 957,038 + PfGW456L13_850 0.66 +0.4 957,038 + PfGW456L13_850 0.66 -1.0 957,038 + PfGW456L13_850 0.66 +0.6 957,038 + PfGW456L13_850 0.66 +0.3 957,039 - PfGW456L13_850 0.67 +1.2 957,039 - PfGW456L13_850 0.67 -2.5 957,039 - PfGW456L13_850 0.67 +0.6 957,039 - PfGW456L13_850 0.67 -0.1 957,039 - PfGW456L13_850 0.67 +0.5 957,039 - PfGW456L13_850 0.67 -0.8 957,039 - PfGW456L13_850 0.67 +0.7 957,039 - PfGW456L13_850 0.67 -0.3 957,039 - PfGW456L13_850 0.67 -0.9 957,131 + PfGW456L13_850 0.70 -0.2 957,131 + PfGW456L13_850 0.70 +0.4 957,132 - PfGW456L13_850 0.70 -0.7 957,168 - PfGW456L13_850 0.71 +2.0 957,233 + PfGW456L13_850 0.73 -0.6 957,233 + PfGW456L13_850 0.73 +0.2 957,233 + PfGW456L13_850 0.73 +0.4 957,234 - PfGW456L13_850 0.73 -0.6 957,234 - PfGW456L13_850 0.73 -0.6 957,234 - PfGW456L13_850 0.73 +0.1 957,234 - PfGW456L13_850 0.73 -0.6 957,234 - PfGW456L13_850 0.73 -0.3 957,234 - PfGW456L13_850 0.73 -1.3 957,312 - PfGW456L13_850 0.76 -0.3 957,326 + PfGW456L13_850 0.77 -0.0 957,327 - PfGW456L13_850 0.77 -1.1 957,404 + PfGW456L13_850 0.79 -0.0 957,404 + PfGW456L13_850 0.79 -0.7 957,404 + PfGW456L13_850 0.79 -0.7 957,404 + PfGW456L13_850 0.79 +0.3 957,405 - PfGW456L13_850 0.79 -0.1 957,405 - PfGW456L13_850 0.79 +0.4 957,405 - PfGW456L13_850 0.79 +0.4 957,405 - PfGW456L13_850 0.79 -1.3 957,405 - PfGW456L13_850 0.79 +2.0 957,698 + PfGW456L13_850 0.90 -0.3 957,698 + PfGW456L13_850 0.90 -0.5 957,698 + PfGW456L13_850 0.90 +0.9 957,699 - PfGW456L13_850 0.90 +0.8 957,699 - PfGW456L13_850 0.90 -1.1 957,791 + +0.1 957,791 + +0.6 957,792 - +0.8 958,050 - +0.5 958,073 - +0.3 958,194 + +0.1 958,194 + -0.4 958,195 - -0.8 958,195 - +0.1 958,195 - +2.1 958,195 - -0.4 958,195 - +0.4 958,195 - -0.5 958,422 - +1.0 958,430 + +0.5 958,430 + -0.7 958,430 + -0.6 958,430 + -1.3 958,430 + +0.8 958,430 + +1.0 958,430 + +0.6 958,430 + -0.7 958,430 + -0.2 958,430 + -1.0 958,430 + +0.1 958,430 + -0.3 958,430 + -0.1 958,431 - +1.5 958,431 - -0.2 958,431 - +1.2 958,431 - -0.2 958,431 - +0.3 958,431 - +1.2 958,431 - -1.6 958,431 - +1.3 958,449 - -0.3 958,529 + -0.5 958,530 - +1.5 958,530 - +0.6 958,570 + +0.4 958,571 - +0.2 958,623 + +1.1 958,624 - -0.0 958,641 + -0.1 958,642 - +1.9 958,690 - PfGW456L13_852 0.18 -0.9 958,785 + PfGW456L13_852 0.51 -0.6
Or see this region's nucleotide sequence