Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4228

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,743,050	+				-1.2
4,743,051	-				-0.0
4,743,066	-				-0.0
4,743,066	-				-0.4
4,743,066	-				-2.3
4,743,066	-				-0.3
4,743,228	+				+0.2
4,743,313	+				+1.0
4,743,313	+				+0.2
4,743,313	+				+0.1
4,743,313	+				-0.5
4,743,313	+				-2.0
4,743,313	+				-0.5
4,743,313	+				+0.7
4,743,313	+				-0.3
4,743,314	-				-0.4
4,743,314	-				+2.2
4,743,314	-				-1.1
4,743,317	+				-0.7
4,743,317	+				+0.6
4,743,317	+				+0.0
4,743,317	+				+0.5
4,743,317	+				+2.7
4,743,317	+				+0.2
4,743,317	+				+0.8
4,743,318	-				+0.1
4,743,318	-				-0.4
4,743,318	-				+0.7
4,743,318	-				+1.5
4,743,318	-				+0.8
4,743,321	+				+0.8
4,743,321	+				+0.6
4,743,347	+				+0.4
4,743,347	+				-0.4
4,743,348	-				-0.0
4,743,348	-				-1.2
4,743,348	-				+0.3
4,743,348	-				+1.5
4,743,348	-				-0.2
4,743,348	-				+1.0
4,743,459	+				-0.3
4,743,459	+				+0.0
4,743,459	+				-0.3
4,743,459	+				-0.1
4,743,460	-				+0.1
4,743,460	-				+0.7
4,743,460	-				-0.2
4,743,472	+				+0.5
4,743,472	+				-0.1
4,743,473	-				+0.1
4,743,479	+				-0.9
4,743,514	+		PfGW456L13_4227	0.18	-0.3
4,743,514	+		PfGW456L13_4227	0.18	-0.9
4,743,514	+		PfGW456L13_4227	0.18	-0.4
4,743,624	+		PfGW456L13_4227	0.67	+0.1
4,743,625	-		PfGW456L13_4227	0.67	+1.6
4,743,636	+		PfGW456L13_4227	0.72	+0.3
4,743,636	+		PfGW456L13_4227	0.72	-0.4
4,743,637	-		PfGW456L13_4227	0.72	+0.9
4,743,637	-		PfGW456L13_4227	0.72	+0.0
4,743,637	-		PfGW456L13_4227	0.72	-0.4
4,743,753	-				-0.6
4,743,763	-				-0.6
4,743,788	-				+1.3
4,743,803	+				-0.2
4,743,803	+				+0.4
4,743,804	-				-0.4
4,743,859	+				+0.7
4,743,859	+				+1.1
4,743,867	+				+0.4
4,743,974	+				-2.2
4,743,974	+				+0.3
4,743,974	+				+1.4
4,743,974	+				-0.3
4,743,975	-				+0.4
4,744,006	-				-0.9
4,744,006	-				-0.4
4,744,006	-				-2.1
4,744,029	+		PfGW456L13_4228	0.11	+0.6
4,744,030	-		PfGW456L13_4228	0.11	+0.3
4,744,043	+		PfGW456L13_4228	0.14	+0.2
4,744,043	+		PfGW456L13_4228	0.14	+0.7
4,744,043	+		PfGW456L13_4228	0.14	+0.7
4,744,043	+		PfGW456L13_4228	0.14	+1.5
4,744,043	+		PfGW456L13_4228	0.14	-1.2
4,744,044	-		PfGW456L13_4228	0.14	+0.3
4,744,044	-		PfGW456L13_4228	0.14	+1.3
4,744,044	-		PfGW456L13_4228	0.14	+0.6
4,744,044	-		PfGW456L13_4228	0.14	-0.5
4,744,176	+		PfGW456L13_4228	0.42	+1.4
4,744,177	-		PfGW456L13_4228	0.42	-1.5
4,744,177	-		PfGW456L13_4228	0.42	-0.9
4,744,177	-		PfGW456L13_4228	0.42	+0.5
4,744,536	+				+0.1
4,744,536	+				-0.6
4,744,536	+				+0.5
4,744,536	+				+0.4
4,744,536	+				+0.7
4,744,536	+				-0.6
4,744,537	-				-0.8
4,744,537	-				+0.5
4,744,537	-				-0.4
4,744,537	-				-0.4
4,744,537	-				-0.4
4,744,599	+				+0.3
4,744,600	-				-0.0
4,744,600	-				-0.5
4,744,600	-				+0.1
4,744,603	-				-0.1
4,744,615	-				-1.1
4,744,615	-				+0.4
4,744,633	+				-2.2
4,744,633	+				-0.6
4,744,633	+				-0.3
4,744,634	-				+0.2
4,744,634	-				-1.1
4,744,926	-		PfGW456L13_4229	0.25	+0.6
4,744,926	-		PfGW456L13_4229	0.25	-0.1
4,744,928	+		PfGW456L13_4229	0.25	-0.1
4,744,928	+		PfGW456L13_4229	0.25	-0.2
4,744,928	+		PfGW456L13_4229	0.25	-1.1
4,744,928	+		PfGW456L13_4229	0.25	+0.6
4,744,928	+		PfGW456L13_4229	0.25	+0.9
4,744,928	+		PfGW456L13_4229	0.25	-0.5
4,744,928	+		PfGW456L13_4229	0.25	-0.5
4,744,929	-		PfGW456L13_4229	0.25	+0.2
4,744,929	-		PfGW456L13_4229	0.25	+1.0
4,744,929	-		PfGW456L13_4229	0.25	-0.2
4,744,929	-		PfGW456L13_4229	0.25	+0.5
4,744,929	-		PfGW456L13_4229	0.25	-0.5
4,744,929	-		PfGW456L13_4229	0.25	+0.5
4,744,971	+		PfGW456L13_4229	0.29	+0.1
4,744,971	+		PfGW456L13_4229	0.29	+0.2
4,744,971	+		PfGW456L13_4229	0.29	-1.0
4,744,972	-		PfGW456L13_4229	0.29	+1.2
4,744,972	-		PfGW456L13_4229	0.29	-0.3
4,744,972	-		PfGW456L13_4229	0.29	-1.2
4,744,972	-		PfGW456L13_4229	0.29	-0.3
4,744,973	+		PfGW456L13_4229	0.29	-0.1
4,744,973	+		PfGW456L13_4229	0.29	-0.7
4,744,973	+		PfGW456L13_4229	0.29	-0.5
4,744,973	+		PfGW456L13_4229	0.29	-1.0
4,744,973	+		PfGW456L13_4229	0.29	+0.8
4,744,973	+		PfGW456L13_4229	0.29	-0.7
4,744,973	+		PfGW456L13_4229	0.29	-0.3
4,744,973	+		PfGW456L13_4229	0.29	-0.5
4,744,973	+		PfGW456L13_4229	0.29	+0.6
4,744,974	-		PfGW456L13_4229	0.29	+0.2
4,744,974	-		PfGW456L13_4229	0.29	+0.9
4,744,974	-		PfGW456L13_4229	0.29	-0.5
4,744,974	-		PfGW456L13_4229	0.29	+0.6
4,744,974	-		PfGW456L13_4229	0.29	+0.3
4,744,974	-		PfGW456L13_4229	0.29	+0.6
4,744,974	-		PfGW456L13_4229	0.29	-2.9
4,744,974	-		PfGW456L13_4229	0.29	-1.6
4,744,974	-		PfGW456L13_4229	0.29	+1.5
4,744,974	-		PfGW456L13_4229	0.29	-0.1
4,744,974	-		PfGW456L13_4229	0.29	+0.3
4,744,974	-		PfGW456L13_4229	0.29	-0.0
4,745,025	-		PfGW456L13_4229	0.33	-0.5
4,745,025	-		PfGW456L13_4229	0.33	+0.5
4,745,025	-		PfGW456L13_4229	0.33	+0.8
4,745,025	-		PfGW456L13_4229	0.33	+0.5
4,745,078	+		PfGW456L13_4229	0.37	+1.3
4,745,078	+		PfGW456L13_4229	0.37	-0.4
4,745,079	-		PfGW456L13_4229	0.37	+2.9
4,745,154	+		PfGW456L13_4229	0.43	+0.9
4,745,154	+		PfGW456L13_4229	0.43	-0.9
4,745,154	+		PfGW456L13_4229	0.43	-0.2
4,745,155	-		PfGW456L13_4229	0.43	-0.3
4,745,282	+		PfGW456L13_4229	0.53	-1.6
4,745,282	+		PfGW456L13_4229	0.53	-0.2
4,745,282	+		PfGW456L13_4229	0.53	-0.9
4,745,300	+		PfGW456L13_4229	0.54	-0.9
4,745,300	+		PfGW456L13_4229	0.54	+0.6
4,745,300	+		PfGW456L13_4229	0.54	-0.5
4,745,300	+		PfGW456L13_4229	0.54	-0.8
4,745,301	-		PfGW456L13_4229	0.54	+1.2
4,745,301	-		PfGW456L13_4229	0.54	-0.4
4,745,301	-		PfGW456L13_4229	0.54	+0.7
4,745,301	-		PfGW456L13_4229	0.54	-0.7
4,745,330	+		PfGW456L13_4229	0.57	+2.7
4,745,330	+		PfGW456L13_4229	0.57	+0.0
4,745,330	+		PfGW456L13_4229	0.57	-0.0
4,745,331	-		PfGW456L13_4229	0.57	+0.6
4,745,331	-		PfGW456L13_4229	0.57	+0.3
4,745,331	-		PfGW456L13_4229	0.57	-0.9
4,745,331	-		PfGW456L13_4229	0.57	+1.8
4,745,331	-		PfGW456L13_4229	0.57	+1.7
4,745,331	-		PfGW456L13_4229	0.57	-1.0
4,745,331	-		PfGW456L13_4229	0.57	-0.6
4,745,331	-		PfGW456L13_4229	0.57	-0.6
4,745,373	-		PfGW456L13_4229	0.60	-0.4
4,745,373	-		PfGW456L13_4229	0.60	-0.4
4,745,373	-		PfGW456L13_4229	0.60	-0.8