Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3795

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
4,264,703	+				-1.8
4,264,703	+				-0.4
4,264,703	+				+2.5
4,264,703	+				+1.0
4,264,703	+				+2.4
4,264,704	-				-0.1
4,264,706	+				-1.6
4,264,707	-				-2.0
4,264,707	-				-1.7
4,264,707	-				-1.9
4,264,707	-				-0.4
4,264,707	-				+0.1
4,264,721	+				+0.8
4,264,722	-				-0.1
4,264,722	-				+0.4
4,264,722	-				-1.2
4,264,850	+				+0.4
4,264,860	+				+0.3
4,264,860	+				+0.6
4,264,860	+				-0.8
4,264,860	+				-1.7
4,264,860	+				-0.6
4,264,860	+				-0.4
4,264,861	-				-0.2
4,264,861	-				+1.9
4,264,861	-				-0.5
4,264,861	-				+0.9
4,264,861	-				-0.0
4,264,896	-				-1.3
4,264,896	-				-0.8
4,265,003	-				+0.5
4,265,003	-				+1.0
4,265,003	-				+1.3
4,265,003	-				+0.3
4,265,242	+		PfGW456L13_3794	0.41	+0.3
4,265,243	-		PfGW456L13_3794	0.41	-0.2
4,265,440	+		PfGW456L13_3794	0.68	+1.3
4,265,606	-				-0.2
4,265,606	-				-3.0
4,265,606	-				-0.9
4,265,632	+				+0.5
4,265,632	+				-0.3
4,265,633	-				-1.0
4,265,633	-				-0.2
4,265,633	-				-0.6
4,265,633	-				-0.9
4,265,725	+				-0.3
4,265,779	-				-2.3
4,265,779	-				-1.9
4,265,913	+		PfGW456L13_3795	0.18	-1.0
4,265,914	-		PfGW456L13_3795	0.18	-1.4
4,265,914	-		PfGW456L13_3795	0.18	-2.9
4,265,914	-		PfGW456L13_3795	0.18	-3.1
4,265,914	-		PfGW456L13_3795	0.18	-1.4
4,265,914	-		PfGW456L13_3795	0.18	-1.2
4,265,919	+		PfGW456L13_3795	0.18	-3.0
4,265,919	+		PfGW456L13_3795	0.18	-3.0
4,265,919	+		PfGW456L13_3795	0.18	-0.9
4,265,919	+		PfGW456L13_3795	0.18	-1.9
4,265,919	+		PfGW456L13_3795	0.18	-2.0
4,265,919	+		PfGW456L13_3795	0.18	-1.9
4,265,919	+		PfGW456L13_3795	0.18	-2.3
4,265,919	+		PfGW456L13_3795	0.18	-1.0
4,265,920	-		PfGW456L13_3795	0.19	-2.9
4,265,920	-		PfGW456L13_3795	0.19	-0.8
4,265,920	-		PfGW456L13_3795	0.19	-3.2
4,265,920	-		PfGW456L13_3795	0.19	-3.6
4,265,920	-		PfGW456L13_3795	0.19	-2.6
4,265,920	-		PfGW456L13_3795	0.19	-3.0
4,265,920	-		PfGW456L13_3795	0.19	-2.2
4,265,920	-		PfGW456L13_3795	0.19	-2.9
4,265,920	-		PfGW456L13_3795	0.19	-1.3
4,265,920	-		PfGW456L13_3795	0.19	-2.6
4,266,019	-		PfGW456L13_3795	0.26	-4.0
4,266,019	-		PfGW456L13_3795	0.26	-1.5
4,266,271	+		PfGW456L13_3795	0.45	-1.1
4,266,597	+		PfGW456L13_3795	0.69	-2.0
4,266,598	-		PfGW456L13_3795	0.69	-3.1
4,266,598	-		PfGW456L13_3795	0.69	-1.3
4,266,598	-		PfGW456L13_3795	0.69	-0.5
4,267,022	+				-0.0
4,267,087	+				-0.6
4,267,087	+				+0.1
4,267,087	+				-0.7
4,267,087	+				-0.9
4,267,088	-				-0.1
4,267,088	-				+1.2
4,267,105	+				-0.1
4,267,105	+				-0.8
4,267,105	+				+0.8
4,267,105	+				-1.0
4,267,105	+				+1.7
4,267,106	-				-1.0
4,267,106	-				-1.2
4,267,106	-				+0.2
4,267,106	-				-0.6
4,267,106	-				+0.4
4,267,197	-				+1.0
4,267,197	-				-0.0
4,267,213	+				-0.4
4,267,214	-				+0.0
4,267,214	-				+0.1
4,267,214	-				+0.3
4,267,214	-				+0.3
4,267,288	+		PfGW456L13_3796	0.15	+0.6
4,267,289	-		PfGW456L13_3796	0.15	+0.3
4,267,289	-		PfGW456L13_3796	0.15	+0.1
4,267,289	-		PfGW456L13_3796	0.15	-1.5
4,267,289	-		PfGW456L13_3796	0.15	-0.4
4,267,336	+		PfGW456L13_3796	0.19	+1.1
4,267,336	+		PfGW456L13_3796	0.19	+0.7
4,267,337	-		PfGW456L13_3796	0.19	+0.5
4,267,337	-		PfGW456L13_3796	0.19	-0.3
4,267,342	+		PfGW456L13_3796	0.19	-0.2
4,267,342	+		PfGW456L13_3796	0.19	-1.0
4,267,342	+		PfGW456L13_3796	0.19	-0.5
4,267,343	-		PfGW456L13_3796	0.19	-0.8
4,267,343	-		PfGW456L13_3796	0.19	-0.5
4,267,343	-		PfGW456L13_3796	0.19	+0.6
4,267,408	+		PfGW456L13_3796	0.24	+0.3
4,267,409	-		PfGW456L13_3796	0.24	-0.9
4,267,409	-		PfGW456L13_3796	0.24	+0.0
4,267,409	-		PfGW456L13_3796	0.24	-0.9
4,267,409	-		PfGW456L13_3796	0.24	+0.1
4,267,525	+		PfGW456L13_3796	0.33	+0.0
4,267,526	-		PfGW456L13_3796	0.33	-0.5
4,267,526	-		PfGW456L13_3796	0.33	+0.6
4,267,526	-		PfGW456L13_3796	0.33	-1.6
4,267,526	-		PfGW456L13_3796	0.33	+0.5
4,267,597	+		PfGW456L13_3796	0.39	-0.0
4,267,654	+		PfGW456L13_3796	0.43	-0.2
4,267,654	+		PfGW456L13_3796	0.43	-0.7
4,267,729	+		PfGW456L13_3796	0.48	-0.4
4,267,729	+		PfGW456L13_3796	0.48	-0.3
4,267,729	+		PfGW456L13_3796	0.48	+0.7
4,267,730	-		PfGW456L13_3796	0.49	+1.7
4,267,730	-		PfGW456L13_3796	0.49	+0.3
4,267,730	-		PfGW456L13_3796	0.49	-1.0
4,267,753	+		PfGW456L13_3796	0.50	-1.0
4,267,753	+		PfGW456L13_3796	0.50	+1.0
4,267,753	+		PfGW456L13_3796	0.50	-0.1
4,267,753	+		PfGW456L13_3796	0.50	+0.7
4,267,753	+		PfGW456L13_3796	0.50	-0.1
4,267,754	-		PfGW456L13_3796	0.50	+0.4
4,267,754	-		PfGW456L13_3796	0.50	+1.3
4,267,754	-		PfGW456L13_3796	0.50	-1.1
4,267,754	-		PfGW456L13_3796	0.50	-0.4
4,267,754	-		PfGW456L13_3796	0.50	+0.8
4,267,754	-		PfGW456L13_3796	0.50	-0.8
4,267,754	-		PfGW456L13_3796	0.50	-0.1
4,267,756	+		PfGW456L13_3796	0.51	+0.2
4,267,786	+		PfGW456L13_3796	0.53	-1.4
4,267,786	+		PfGW456L13_3796	0.53	-1.2
4,267,786	+		PfGW456L13_3796	0.53	-0.0
4,267,786	+		PfGW456L13_3796	0.53	-0.2
4,267,787	-		PfGW456L13_3796	0.53	+0.1
4,267,787	-		PfGW456L13_3796	0.53	+0.6
4,267,787	-		PfGW456L13_3796	0.53	-0.2
4,267,787	-		PfGW456L13_3796	0.53	-1.1
4,267,787	-		PfGW456L13_3796	0.53	-1.6
4,267,787	-		PfGW456L13_3796	0.53	+2.3
4,267,787	-		PfGW456L13_3796	0.53	-0.2
4,267,787	-		PfGW456L13_3796	0.53	+0.3
4,267,804	+		PfGW456L13_3796	0.54	+0.5
4,267,805	-		PfGW456L13_3796	0.54	+0.5
4,267,805	-		PfGW456L13_3796	0.54	-2.2
4,267,805	-		PfGW456L13_3796	0.54	+0.0