Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2843

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
3,151,380	+				-0.0
3,151,437	+				+0.5
3,151,437	+				+0.0
3,151,537	+				-0.5
3,151,537	+				-1.3
3,151,537	+				-0.2
3,151,537	+				-0.0
3,151,538	-				-2.9
3,151,630	+		PfGW456L13_2842	0.28	-4.7
3,151,630	+		PfGW456L13_2842	0.28	-1.9
3,151,631	-		PfGW456L13_2842	0.28	-2.5
3,151,631	-		PfGW456L13_2842	0.28	-2.2
3,151,631	-		PfGW456L13_2842	0.28	-3.5
3,151,688	-		PfGW456L13_2842	0.40	-3.1
3,151,717	+		PfGW456L13_2842	0.46	-3.5
3,151,856	+		PfGW456L13_2842	0.74	-1.3
3,151,857	-		PfGW456L13_2842	0.74	-3.0
3,151,857	-		PfGW456L13_2842	0.74	-3.5
3,151,971	-				-4.1
3,151,985	+				-4.0
3,151,985	+				-3.4
3,151,985	+				-1.7
3,151,986	-				-0.0
3,151,986	-				-3.4
3,151,986	-				-2.9
3,151,986	-				-3.8
3,151,986	-				-4.0
3,151,986	-				-3.5
3,151,986	-				-3.1
3,151,986	-				-2.4
3,152,011	-				-5.1
3,152,017	-				-2.1
3,152,024	+				-4.1
3,152,024	+				-3.1
3,152,024	+				-3.8
3,152,024	+				-3.5
3,152,025	-				-2.3
3,152,025	-				-2.2
3,152,025	-				-3.3
3,152,052	+				-4.9
3,152,066	+				-0.7
3,152,066	+				-1.7
3,152,067	-				-0.7
3,152,067	-				-3.1
3,152,180	+		PfGW456L13_2843	0.13	-3.6
3,152,180	+		PfGW456L13_2843	0.13	-2.6
3,152,181	-		PfGW456L13_2843	0.13	-2.4
3,152,297	+		PfGW456L13_2843	0.20	-1.8
3,152,297	+		PfGW456L13_2843	0.20	-2.5
3,152,298	-		PfGW456L13_2843	0.20	-2.8
3,152,298	-		PfGW456L13_2843	0.20	-2.1
3,152,298	-		PfGW456L13_2843	0.20	-3.6
3,152,531	+		PfGW456L13_2843	0.34	-3.4
3,152,627	+		PfGW456L13_2843	0.40	-1.1
3,152,627	+		PfGW456L13_2843	0.40	-2.4
3,152,628	-		PfGW456L13_2843	0.40	-2.6
3,152,736	-		PfGW456L13_2843	0.46	-3.1
3,152,888	+		PfGW456L13_2843	0.55	-2.3
3,152,888	+		PfGW456L13_2843	0.55	-2.6
3,152,888	+		PfGW456L13_2843	0.55	-3.5
3,152,889	-		PfGW456L13_2843	0.55	-2.5
3,152,889	-		PfGW456L13_2843	0.55	-1.3
3,152,889	-		PfGW456L13_2843	0.55	-4.0
3,152,918	+		PfGW456L13_2843	0.57	-4.0
3,152,919	-		PfGW456L13_2843	0.57	-2.8
3,152,919	-		PfGW456L13_2843	0.57	-1.7
3,152,919	-		PfGW456L13_2843	0.57	-2.6
3,152,942	+		PfGW456L13_2843	0.59	-2.1
3,153,001	-		PfGW456L13_2843	0.62	-2.9
3,153,383	+		PfGW456L13_2843	0.85	-2.8
3,153,383	+		PfGW456L13_2843	0.85	-1.5
3,153,384	-		PfGW456L13_2843	0.85	-2.6
3,153,384	-		PfGW456L13_2843	0.85	-1.9
3,153,472	-				-3.9
3,153,489	+				-2.1
3,153,490	-				-4.0
3,153,490	-				-3.1
3,153,490	-				-3.5
3,153,490	-				-2.0
3,153,491	+				-3.2
3,153,491	+				-2.5
3,153,491	+				-1.9
3,153,491	+				-4.2
3,153,491	+				-4.2
3,153,491	+				-2.6
3,153,491	+				-1.3
3,153,492	-				-2.7
3,153,492	-				-3.2
3,153,492	-				-2.2
3,153,492	-				-3.3
3,153,492	-				-4.2
3,153,492	-				-2.9
3,153,492	-				-1.1
3,153,551	+				-3.2
3,153,608	+				-1.1
3,153,608	+				-2.4
3,153,617	+				-1.7
3,153,617	+				-2.7
3,153,617	+				-3.6
3,153,617	+				-2.2
3,153,618	-				-2.6
3,153,618	-				-2.6
3,153,619	+				-3.7
3,153,619	+				-1.5
3,153,619	+				-5.0
3,153,619	+				-0.7
3,153,619	+				-3.6
3,153,619	+				-3.0
3,153,619	+				-3.4
3,153,619	+				-1.5
3,153,619	+				-2.0
3,153,619	+				-3.4
3,153,619	+				-0.7
3,153,620	-				-0.7
3,153,620	-				-3.3
3,153,620	-				-1.3
3,153,620	-				-1.5
3,153,620	-				-2.3
3,153,620	-				-2.8
3,153,620	-				-3.0
3,153,620	-				-1.6
3,153,623	+				-4.1
3,153,623	+				-3.9
3,153,623	+				-3.4
3,153,623	+				-3.0
3,153,623	+				-0.7
3,153,623	+				-2.8
3,153,623	+				-3.7
3,153,623	+				-2.5
3,153,623	+				-1.7
3,153,623	+				-0.3
3,153,623	+				-0.7
3,153,623	+				-1.7
3,153,623	+				-1.6
3,153,623	+				-4.2
3,153,623	+				-3.3
3,153,623	+				-3.8
3,153,623	+				-4.4
3,153,623	+				-2.2
3,153,623	+				-3.7
3,153,623	+				-2.8
3,153,624	-				-3.3
3,153,624	-				-1.9
3,153,624	-				-2.6
3,153,624	-				-1.5
3,153,624	-				-2.5
3,153,624	-				-1.5
3,153,624	-				-3.0
3,153,624	-				-3.9
3,153,624	-				-2.3
3,153,624	-				-3.3
3,153,624	-				-1.5
3,153,624	-				-2.6
3,153,624	-				-1.3
3,153,624	-				-1.3
3,153,624	-				-1.3
3,153,624	-				-1.3
3,153,624	-				-2.1
3,153,624	-				-1.7
3,153,624	-				-3.3
3,153,627	+				-1.1
3,153,627	+				-1.2
3,153,627	+				-2.6
3,153,627	+				-4.4
3,153,627	+				-2.5
3,153,627	+				-2.6
3,153,627	+				-4.5
3,153,627	+				-3.5
3,153,627	+				-2.6
3,153,627	+				-2.3
3,153,627	+				-2.8
3,153,627	+				-2.3
3,153,627	+				-3.3
3,153,627	+				-4.3
3,153,627	+				-2.7
3,153,627	+				-2.5
3,153,627	+				-4.1
3,153,627	+				-4.6
3,153,627	+				-0.7
3,153,627	+				-4.3
3,153,627	+				-1.5
3,153,627	+				-4.7
3,153,627	+				-2.5
3,153,627	+				-3.8
3,153,627	+				-2.4
3,153,627	+				-3.1
3,153,627	+				-3.0
3,153,627	+				-4.1
3,153,627	+				-0.4
3,153,627	+				-1.9
3,153,627	+				-3.4
3,153,627	+				-3.1
3,153,627	+				-0.7
3,153,627	+				-2.0
3,153,628	-				-2.5
3,153,628	-				-1.3
3,153,628	-				-1.1
3,153,628	-				-1.5
3,153,628	-				-2.3
3,153,628	-				-0.3
3,153,628	-				-2.4
3,153,628	-				-2.2
3,153,628	-				-4.1
3,153,628	-				-2.1
3,153,628	-				-3.0
3,153,628	-				-2.7
3,153,628	-				-3.6
3,153,628	-				-2.5
3,153,628	-				-2.4
3,153,628	-				-1.3
3,153,628	-				-1.1
3,153,628	-				-3.1
3,153,628	-				-2.5
3,153,628	-				-3.5
3,153,628	-				-0.7
3,153,628	-				-1.1
3,153,628	-				-1.2
3,153,628	-				-2.7
3,153,628	-				-2.6
3,153,628	-				-2.9
3,153,628	-				-3.5
3,153,628	-				-3.1
3,153,628	-				-2.1
3,153,628	-				-2.4
3,153,628	-				-1.9
3,153,628	-				-3.3
3,153,628	-				-3.5
3,153,628	-				-2.7
3,153,628	-				-2.2
3,153,628	-				-3.4
3,153,629	+				-3.6
3,153,629	+				-2.6
3,153,629	+				-2.1
3,153,629	+				-3.0
3,153,629	+				-4.5
3,153,629	+				-2.0
3,153,629	+				-2.6
3,153,629	+				-1.1
3,153,629	+				-3.1
3,153,629	+				-5.1
3,153,629	+				-5.0
3,153,629	+				-1.5
3,153,629	+				-2.8
3,153,629	+				-3.2
3,153,629	+				-3.7
3,153,629	+				-1.6
3,153,629	+				-4.7
3,153,629	+				-3.5
3,153,629	+				-3.5
3,153,629	+				-2.8
3,153,629	+				-4.1
3,153,629	+				-3.1
3,153,629	+				-2.2
3,153,630	-				-3.3
3,153,630	-				+0.3
3,153,630	-				-1.8
3,153,630	-				-2.1
3,153,630	-				-2.9
3,153,630	-				-1.2
3,153,630	-				-2.5
3,153,630	-				-5.2
3,153,630	-				-2.4
3,153,630	-				-1.5
3,153,630	-				-3.5
3,153,630	-				-1.9
3,153,630	-				-3.3
3,153,630	-				-1.5
3,153,630	-				-3.2
3,153,630	-				-3.8
3,153,630	-				-2.4
3,153,630	-				-3.1
3,153,630	-				-3.3
3,153,630	-				-1.5
3,153,630	-				-2.2
3,153,695	-				-1.5
3,153,697	+				-3.6
3,153,697	+				+0.3
3,153,697	+				-1.7
3,153,697	+				-4.5
3,153,697	+				-3.5
3,153,697	+				-2.7
3,153,697	+				-3.7
3,153,698	-				+0.3
3,153,698	-				+1.7
3,153,753	-				-0.7
3,153,795	+				-3.5
3,153,796	-				-0.1
3,153,828	+				+0.1
3,153,829	-				-1.3
3,153,867	+				+0.2
3,153,867	+				-0.2
3,153,868	-				-0.5
3,153,884	+				+0.4
3,153,885	-				-0.6
3,154,033	-				-0.1
3,154,096	+				-0.3
3,154,116	-				-3.8
3,154,116	-				-0.3
3,154,116	-				+1.8
3,154,164	+				+1.6
3,154,164	+				-1.1
3,154,164	+				-0.7
3,154,165	-				-0.0
3,154,173	+				-0.4
3,154,173	+				-1.2
3,154,174	-				-1.2
3,154,174	-				-0.6
3,154,176	+				-1.1
3,154,271	+		PfGW456L13_2844	0.11	-0.2
3,154,401	-		PfGW456L13_2844	0.23	+0.2