Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2274

Experiment: nitrate (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate (N)
2,486,744	+		PfGW456L13_2272	0.61	-1.0
2,486,744	+		PfGW456L13_2272	0.61	-0.5
2,486,774	+		PfGW456L13_2272	0.67	-2.0
2,486,839	+		PfGW456L13_2272	0.80	-2.2
2,486,839	+		PfGW456L13_2272	0.80	-2.1
2,486,839	+		PfGW456L13_2272	0.80	-1.3
2,486,839	+		PfGW456L13_2272	0.80	-2.8
2,486,839	+		PfGW456L13_2272	0.80	-1.2
2,486,839	+		PfGW456L13_2272	0.80	-0.8
2,486,840	-		PfGW456L13_2272	0.80	-1.7
2,486,840	-		PfGW456L13_2272	0.80	-2.5
2,486,840	-		PfGW456L13_2272	0.80	+0.7
2,486,840	-		PfGW456L13_2272	0.80	-1.3
2,486,840	-				-0.5
2,486,840	-		PfGW456L13_2272	0.80	+0.2
2,486,840	-		PfGW456L13_2272	0.80	-1.2
2,486,840	-		PfGW456L13_2272	0.80	-0.7
2,486,840	-		PfGW456L13_2272	0.80	-0.9
2,486,852	+		PfGW456L13_2272	0.82	-0.8
2,486,963	+				+0.3
2,486,963	+				-0.8
2,486,963	+				-2.3
2,486,964	-				-3.8
2,486,964	-				-0.2
2,486,964	-				-0.7
2,486,964	-				-2.7
2,486,964	-				-2.8
2,486,964	-				-0.2
2,486,964	-				-1.8
2,486,964	-				-1.6
2,487,072	+				-0.2
2,487,072	+				-0.6
2,487,072	+				+1.0
2,487,072	+				+1.7
2,487,072	+				-0.1
2,487,072	+				+0.5
2,487,073	-				-0.6
2,487,073	-				-1.8
2,487,073	-				+0.9
2,487,073	-				-0.3
2,487,074	+				+0.5
2,487,074	+				-0.2
2,487,074	+				+0.1
2,487,074	+				-0.1
2,487,074	+				+0.4
2,487,074	+				+0.2
2,487,074	+				-2.1
2,487,075	-				-0.3
2,487,075	-				+0.1
2,487,075	-				-0.5
2,487,075	-				+0.0
2,487,075	-				-2.1
2,487,075	-				-1.1
2,487,075	-				-0.5
2,487,094	+				+1.2
2,487,094	+				+0.0
2,487,094	+				-0.2
2,487,095	-				-0.5
2,487,095	-				-1.5
2,487,095	-				+0.7
2,487,095	-				-1.3
2,487,110	+				-0.1
2,487,110	+				-1.3
2,487,111	-				-0.8
2,487,130	+				-1.3
2,487,130	+				-0.3
2,487,130	+				-2.0
2,487,130	+				+1.2
2,487,131	-				-1.8
2,487,131	-				-0.1
2,487,131	-				-2.0
2,487,131	-				-1.4
2,487,131	-				-2.2
2,487,150	-				-1.6
2,487,240	+		PfGW456L13_2273	0.24	-1.7
2,487,277	-		PfGW456L13_2273	0.31	-1.2
2,487,368	+		PfGW456L13_2273	0.48	-2.0
2,487,368	+		PfGW456L13_2273	0.48	-0.2
2,487,762	-		PfGW456L13_2274	0.10	-0.9
2,487,762	-		PfGW456L13_2274	0.10	-2.7
2,487,762	-		PfGW456L13_2274	0.10	-1.6
2,487,762	-		PfGW456L13_2274	0.10	-1.1
2,487,762	-		PfGW456L13_2274	0.10	-1.2
2,487,762	-		PfGW456L13_2274	0.10	-0.3
2,487,773	+		PfGW456L13_2274	0.11	-2.0
2,487,773	+		PfGW456L13_2274	0.11	-0.2
2,487,773	+		PfGW456L13_2274	0.11	-1.8
2,487,773	+		PfGW456L13_2274	0.11	-0.7
2,487,773	+		PfGW456L13_2274	0.11	+0.5
2,487,838	+		PfGW456L13_2274	0.17	+0.1
2,487,839	-		PfGW456L13_2274	0.17	+0.1
2,488,025	+				-0.9
2,488,026	-		PfGW456L13_2274	0.32	-1.2
2,488,207	-		PfGW456L13_2274	0.47	+0.1
2,488,258	+		PfGW456L13_2274	0.51	-2.2
2,488,258	+		PfGW456L13_2274	0.51	-0.9
2,488,258	+		PfGW456L13_2274	0.51	-1.9
2,488,258	+		PfGW456L13_2274	0.51	-0.8
2,488,258	+		PfGW456L13_2274	0.51	+1.2
2,488,258	+		PfGW456L13_2274	0.51	-2.0
2,488,258	+		PfGW456L13_2274	0.51	+1.5
2,488,258	+		PfGW456L13_2274	0.51	-0.5
2,488,259	-		PfGW456L13_2274	0.51	-0.3
2,488,259	-		PfGW456L13_2274	0.51	-1.2
2,488,259	-		PfGW456L13_2274	0.51	-0.5
2,488,259	-		PfGW456L13_2274	0.51	+1.6
2,488,364	+		PfGW456L13_2274	0.59	-0.8
2,488,364	+		PfGW456L13_2274	0.59	-1.3
2,488,365	-		PfGW456L13_2274	0.60	-1.4
2,488,365	-		PfGW456L13_2274	0.60	-1.5
2,488,595	-		PfGW456L13_2274	0.78	-1.4
2,488,640	+		PfGW456L13_2274	0.82	-1.9
2,488,640	+		PfGW456L13_2274	0.82	-1.8
2,488,640	+		PfGW456L13_2274	0.82	-0.2
2,488,641	-		PfGW456L13_2274	0.82	-1.3
2,488,641	-		PfGW456L13_2274	0.82	-0.9
2,488,641	-		PfGW456L13_2274	0.82	-0.3
2,488,641	-		PfGW456L13_2274	0.82	+0.1
2,488,690	+		PfGW456L13_2274	0.86	-2.5
2,488,691	-		PfGW456L13_2274	0.86	-2.5
2,488,691	-		PfGW456L13_2274	0.86	-2.4
2,488,691	-		PfGW456L13_2274	0.86	+0.5
2,488,729	+		PfGW456L13_2274	0.89	-0.1
2,488,784	+				-0.8
2,488,785	-				-1.7
2,488,861	+				-1.6
2,488,861	+				-1.1
2,488,862	-				-1.5
2,488,862	-				+0.2
2,488,862	-				-0.5
2,488,862	-				-0.0
2,488,966	+		PfGW456L13_2275	0.21	-0.4
2,489,122	+				-1.1
2,489,176	+				-0.6
2,489,185	+				+0.3
2,489,278	+				-0.8
2,489,278	+				-0.0
2,489,279	-				-0.2
2,489,324	+				+0.6
2,489,325	-				+0.6
2,489,371	-				-0.8
2,489,393	-				-0.3
2,489,446	+				-0.3
2,489,446	+				+0.3
2,489,467	+				-0.2
2,489,622	+		PfGW456L13_2276	0.19	+0.4
2,489,622	+		PfGW456L13_2276	0.19	-0.7
2,489,622	+		PfGW456L13_2276	0.19	-0.8
2,489,622	+		PfGW456L13_2276	0.19	+0.1
2,489,622	+		PfGW456L13_2276	0.19	-0.5
2,489,622	+		PfGW456L13_2276	0.19	-1.7
2,489,622	+		PfGW456L13_2276	0.19	-1.0
2,489,622	+		PfGW456L13_2276	0.19	+0.1
2,489,622	+		PfGW456L13_2276	0.19	-0.2
2,489,623	-		PfGW456L13_2276	0.19	-0.6
2,489,623	-		PfGW456L13_2276	0.19	-1.9
2,489,623	-		PfGW456L13_2276	0.19	+1.5
2,489,623	-		PfGW456L13_2276	0.19	+0.8
2,489,623	-		PfGW456L13_2276	0.19	+0.2
2,489,623	-		PfGW456L13_2276	0.19	-0.7
2,489,623	-		PfGW456L13_2276	0.19	+0.1
2,489,623	-		PfGW456L13_2276	0.19	-0.0
2,489,623	-		PfGW456L13_2276	0.19	+0.8
2,489,623	-		PfGW456L13_2276	0.19	-0.9
2,489,672	+		PfGW456L13_2276	0.24	+1.1
2,489,689	+		PfGW456L13_2276	0.26	-0.5
2,489,690	-		PfGW456L13_2276	0.26	-0.8
2,489,690	-		PfGW456L13_2276	0.26	+0.2
2,489,716	+		PfGW456L13_2276	0.29	-0.5
2,489,717	-		PfGW456L13_2276	0.29	+1.1
2,489,721	-		PfGW456L13_2276	0.30	-0.2
2,489,833	+		PfGW456L13_2276	0.42	+0.9
2,489,833	+		PfGW456L13_2276	0.42	+0.3
2,489,833	+		PfGW456L13_2276	0.42	-0.1
2,489,833	+		PfGW456L13_2276	0.42	-0.7
2,489,834	-		PfGW456L13_2276	0.42	+0.1
2,489,834	-		PfGW456L13_2276	0.42	-1.5