Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3959

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
4,441,135	+		PfGW456L13_3958	0.46	-0.1
4,441,135	+		PfGW456L13_3958	0.46	+0.9
4,441,285	-		PfGW456L13_3958	0.56	-0.3
4,441,296	+		PfGW456L13_3958	0.57	-1.3
4,441,296	+		PfGW456L13_3958	0.57	+0.5
4,441,296	+		PfGW456L13_3958	0.57	-0.4
4,441,296	+		PfGW456L13_3958	0.57	-0.7
4,441,296	+		PfGW456L13_3958	0.57	-0.3
4,441,296	+		PfGW456L13_3958	0.57	-0.7
4,441,296	+		PfGW456L13_3958	0.57	+0.8
4,441,297	-		PfGW456L13_3958	0.57	-0.3
4,441,297	-		PfGW456L13_3958	0.57	-1.3
4,441,297	-		PfGW456L13_3958	0.57	-2.3
4,441,311	+		PfGW456L13_3958	0.58	-0.1
4,441,311	+		PfGW456L13_3958	0.58	-1.9
4,441,332	+		PfGW456L13_3958	0.59	+0.4
4,441,332	+		PfGW456L13_3958	0.59	+0.1
4,441,332	+		PfGW456L13_3958	0.59	-1.0
4,441,332	+		PfGW456L13_3958	0.59	+0.5
4,441,333	-		PfGW456L13_3958	0.59	+0.4
4,441,333	-		PfGW456L13_3958	0.59	+0.8
4,441,419	+		PfGW456L13_3958	0.65	-0.2
4,441,419	+		PfGW456L13_3958	0.65	+0.0
4,441,419	+		PfGW456L13_3958	0.65	-0.3
4,441,420	-		PfGW456L13_3958	0.65	+0.5
4,441,420	-		PfGW456L13_3958	0.65	-1.1
4,441,420	-		PfGW456L13_3958	0.65	-0.5
4,441,420	-		PfGW456L13_3958	0.65	-2.5
4,441,420	-		PfGW456L13_3958	0.65	+1.8
4,441,420	-		PfGW456L13_3958	0.65	-1.2
4,441,420	-		PfGW456L13_3958	0.65	+2.5
4,441,593	+		PfGW456L13_3958	0.76	-0.4
4,441,593	+		PfGW456L13_3958	0.76	-2.0
4,441,593	+		PfGW456L13_3958	0.76	+0.6
4,441,593	+		PfGW456L13_3958	0.76	-0.4
4,441,593	+		PfGW456L13_3958	0.76	+0.0
4,441,593	+		PfGW456L13_3958	0.76	+1.5
4,441,594	-		PfGW456L13_3958	0.76	-0.3
4,441,594	-		PfGW456L13_3958	0.76	+1.1
4,441,594	-		PfGW456L13_3958	0.76	+0.5
4,441,594	-		PfGW456L13_3958	0.76	+0.7
4,441,710	+		PfGW456L13_3958	0.84	+1.3
4,441,711	-		PfGW456L13_3958	0.84	+0.4
4,441,719	+		PfGW456L13_3958	0.84	+0.5
4,441,720	-		PfGW456L13_3958	0.84	+0.7
4,441,720	-		PfGW456L13_3958	0.84	-0.5
4,441,857	+				-0.3
4,441,857	+				-0.3
4,441,857	+				-1.2
4,441,858	-				+1.5
4,441,858	-				+0.1
4,441,962	+				-1.0
4,441,962	+				-0.1
4,441,962	+				-0.0
4,441,962	+				+0.4
4,441,962	+				-0.9
4,441,962	+				+2.6
4,441,962	+				+1.1
4,441,963	-				-0.0
4,441,963	-				-0.1
4,441,963	-				-2.0
4,441,963	-				+0.3
4,441,963	-				+0.6
4,441,963	-				+1.0
4,441,963	-				+0.3
4,441,963	-				+0.4
4,441,963	-				-1.4
4,441,963	-				-0.0
4,441,969	+				+1.9
4,441,969	+				+0.7
4,441,969	+				+0.1
4,441,969	+				+0.3
4,441,969	+				+0.5
4,441,969	+				+0.6
4,441,969	+				-0.6
4,441,969	+				+0.0
4,442,077	-				+0.2
4,442,077	-				-0.0
4,442,077	-				-0.3
4,442,077	-				+0.3
4,442,077	-				+0.8
4,442,090	+				-1.0
4,442,170	+				+1.0
4,442,170	+				-1.5
4,442,170	+				-0.8
4,442,170	+				-0.5
4,442,170	+				+0.2
4,442,170	+				-0.7
4,442,170	+				+0.0
4,442,170	+				-0.2
4,442,170	+				-1.9
4,442,171	-				-0.7
4,442,171	-				-0.7
4,442,171	-				+0.1
4,442,171	-				-1.5
4,442,171	-				+0.6
4,442,171	-				-0.8
4,442,171	-				-2.5
4,442,171	-				-0.3
4,442,196	-				-0.0
4,442,196	-				+0.3
4,442,196	-				+0.6
4,442,196	-				+0.1
4,442,196	-				+0.3
4,442,236	+				+0.9
4,442,237	-				-0.0
4,442,237	-				-2.0
4,442,446	+		PfGW456L13_3959	0.18	+0.7
4,442,447	-		PfGW456L13_3959	0.18	+0.4
4,442,447	-		PfGW456L13_3959	0.18	+1.0
4,442,466	-		PfGW456L13_3959	0.19	+0.1
4,442,466	-		PfGW456L13_3959	0.19	-0.8
4,442,471	+		PfGW456L13_3959	0.19	-1.1
4,442,471	+		PfGW456L13_3959	0.19	-0.1
4,442,471	+		PfGW456L13_3959	0.19	-1.7
4,442,472	-		PfGW456L13_3959	0.19	-1.4
4,442,472	-		PfGW456L13_3959	0.19	-1.0
4,442,571	-		PfGW456L13_3959	0.24	-2.5
4,442,618	+		PfGW456L13_3959	0.27	+0.3
4,442,619	-		PfGW456L13_3959	0.27	-1.0
4,442,680	+		PfGW456L13_3959	0.30	+0.3
4,442,681	-		PfGW456L13_3959	0.30	-1.2
4,442,710	+		PfGW456L13_3959	0.31	-0.1
4,442,711	-		PfGW456L13_3959	0.31	-1.0
4,442,711	-		PfGW456L13_3959	0.31	-0.1
4,442,905	+		PfGW456L13_3959	0.41	+0.6
4,442,905	+		PfGW456L13_3959	0.41	+0.5
4,442,905	+		PfGW456L13_3959	0.41	+1.2
4,442,906	-		PfGW456L13_3959	0.41	+0.4
4,442,906	-		PfGW456L13_3959	0.41	-1.6
4,442,906	-		PfGW456L13_3959	0.41	+0.8
4,442,906	-		PfGW456L13_3959	0.41	+0.6
4,442,906	-		PfGW456L13_3959	0.41	+0.1
4,442,906	-		PfGW456L13_3959	0.41	+0.9
4,443,011	-		PfGW456L13_3959	0.46	-0.4
4,443,011	-		PfGW456L13_3959	0.46	+0.3
4,443,049	+		PfGW456L13_3959	0.48	-1.2
4,443,049	+		PfGW456L13_3959	0.48	-1.0
4,443,049	+		PfGW456L13_3959	0.48	+0.4
4,443,050	-		PfGW456L13_3959	0.48	+0.0
4,443,050	-		PfGW456L13_3959	0.48	+0.1
4,443,050	-		PfGW456L13_3959	0.48	+1.1
4,443,050	-		PfGW456L13_3959	0.48	+0.1
4,443,050	-		PfGW456L13_3959	0.48	+1.2
4,443,118	+		PfGW456L13_3959	0.51	+0.0
4,443,167	-				+0.6
4,443,175	+		PfGW456L13_3959	0.54	+1.2
4,443,283	+		PfGW456L13_3959	0.60	+0.3
4,443,283	+		PfGW456L13_3959	0.60	-0.1
4,443,283	+		PfGW456L13_3959	0.60	-0.2
4,443,355	+		PfGW456L13_3959	0.63	+0.7
4,443,355	+		PfGW456L13_3959	0.63	+1.1
4,443,356	-		PfGW456L13_3959	0.63	+0.8
4,443,356	-		PfGW456L13_3959	0.63	-0.3
4,443,371	-		PfGW456L13_3959	0.64	+0.8
4,443,371	-		PfGW456L13_3959	0.64	-1.9
4,443,371	-		PfGW456L13_3959	0.64	-0.6
4,443,559	+		PfGW456L13_3959	0.73	+0.8
4,443,559	+		PfGW456L13_3959	0.73	-0.3
4,443,559	+		PfGW456L13_3959	0.73	-0.0
4,443,559	+		PfGW456L13_3959	0.73	+1.0
4,443,559	+		PfGW456L13_3959	0.73	-0.2
4,443,559	+		PfGW456L13_3959	0.73	-0.2
4,443,559	+		PfGW456L13_3959	0.73	-0.6
4,443,559	+		PfGW456L13_3959	0.73	+0.1
4,443,560	-		PfGW456L13_3959	0.73	-0.4
4,443,560	-		PfGW456L13_3959	0.73	-0.0
4,443,560	-		PfGW456L13_3959	0.73	-0.2
4,443,560	-		PfGW456L13_3959	0.73	-0.4
4,443,560	-		PfGW456L13_3959	0.73	-0.6
4,443,560	-		PfGW456L13_3959	0.73	+0.3
4,443,560	-		PfGW456L13_3959	0.73	+0.3
4,443,560	-		PfGW456L13_3959	0.73	+0.7
4,443,640	+		PfGW456L13_3959	0.77	+0.8
4,443,641	-		PfGW456L13_3959	0.77	+0.9
4,443,641	-		PfGW456L13_3959	0.77	+0.4
4,443,664	+		PfGW456L13_3959	0.78	-0.4
4,443,664	+		PfGW456L13_3959	0.78	+0.4
4,443,665	-		PfGW456L13_3959	0.79	-0.3
4,443,665	-		PfGW456L13_3959	0.79	+0.1
4,443,800	-		PfGW456L13_3959	0.85	+1.9
4,443,800	-		PfGW456L13_3959	0.85	-0.8
4,443,800	-		PfGW456L13_3959	0.85	-0.0
4,443,800	-		PfGW456L13_3959	0.85	-1.1
4,443,800	-		PfGW456L13_3959	0.85	-1.3
4,443,814	+		PfGW456L13_3959	0.86	+0.5
4,443,814	+		PfGW456L13_3959	0.86	+1.2
4,443,814	+		PfGW456L13_3959	0.86	+0.4
4,443,814	+		PfGW456L13_3959	0.86	-2.2
4,443,815	-		PfGW456L13_3959	0.86	+0.1
4,443,817	+		PfGW456L13_3959	0.86	+0.2
4,443,817	+		PfGW456L13_3959	0.86	-0.6
4,443,817	+		PfGW456L13_3959	0.86	-0.3
4,443,817	+		PfGW456L13_3959	0.86	+0.9
4,443,817	+		PfGW456L13_3959	0.86	-2.4
4,443,817	+		PfGW456L13_3959	0.86	-0.7
4,443,817	+		PfGW456L13_3959	0.86	-0.6
4,443,818	-		PfGW456L13_3959	0.86	-1.7
4,443,818	-		PfGW456L13_3959	0.86	+0.3
4,443,818	-		PfGW456L13_3959	0.86	-0.3
4,443,823	+		PfGW456L13_3959	0.86	-1.0
4,443,824	-		PfGW456L13_3959	0.86	+0.3
4,443,824	-		PfGW456L13_3959	0.86	-1.0
4,443,824	-		PfGW456L13_3959	0.86	-2.0
4,443,824	-		PfGW456L13_3959	0.86	-1.5
4,443,827	-		PfGW456L13_3959	0.87	-0.4
4,443,838	+		PfGW456L13_3959	0.87	+0.4
4,443,839	-		PfGW456L13_3959	0.87	-0.4
4,443,880	+		PfGW456L13_3959	0.89	-0.4
4,443,880	+				-0.3
4,444,080	+				+0.4
4,444,080	+				-1.5
4,444,081	-				+0.9
4,444,081	-				+1.3
4,444,081	-				-1.0
4,444,081	-				+0.1
4,444,102	+				+0.2
4,444,103	-				-0.2
4,444,103	-				-1.4
4,444,103	-				-1.3
4,444,235	-				+0.2
4,444,302	+				+1.2
4,444,302	+				-2.3
4,444,302	+				+0.3
4,444,302	+				-1.1
4,444,303	-				-1.8
4,444,303	-				-0.5
4,444,303	-				-0.6
4,444,303	-				+0.5
4,444,303	-				-0.0
4,444,344	+				+0.6
4,444,344	+				-0.5
4,444,344	+				-0.2
4,444,344	+				-0.3
4,444,344	+				-0.7
4,444,344	+				+0.7
4,444,345	-				-0.2
4,444,345	-				-4.0
4,444,345	-				-2.0
4,444,345	-				-3.1
4,444,345	-				-3.2
4,444,346	+				-1.4
4,444,346	+				-3.0
4,444,346	+				-2.0
4,444,347	-				-4.4
4,444,347	-				-3.7
4,444,347	-				-3.8
4,444,347	-				-2.6
4,444,349	+				-1.5
4,444,349	+				-0.7
4,444,349	+				-2.2
4,444,349	+				-1.1
4,444,349	+				-1.4
4,444,349	+				-0.4
4,444,349	+				-2.0
4,444,349	+				-2.5
4,444,349	+				-1.8
4,444,349	+				-1.4
4,444,349	+				-1.8
4,444,349	+				-0.9
4,444,349	+				-1.0
4,444,350	-				-2.0
4,444,350	-				-3.0
4,444,350	-				-2.8
4,444,350	-				-2.3
4,444,350	-				-3.9
4,444,350	-				-4.9
4,444,350	-				-2.4
4,444,350	-				-3.7
4,444,350	-				-2.0
4,444,350	-				-1.9
4,444,350	-				-2.2
4,444,350	-				-1.0
4,444,350	-				-1.0
4,444,374	-				-1.3
4,444,432	-				-1.5
4,444,432	-				-2.3
4,444,544	+				-2.0
4,444,659	-		PfGW456L13_3960	0.19	-3.9
4,444,722	+		PfGW456L13_3960	0.24	-2.6
4,444,722	+		PfGW456L13_3960	0.24	-2.0
4,444,877	+		PfGW456L13_3960	0.37	-2.8
4,444,878	-		PfGW456L13_3960	0.37	-3.0
4,444,878	-		PfGW456L13_3960	0.37	-1.9
4,444,883	+		PfGW456L13_3960	0.38	-3.5
4,444,884	-		PfGW456L13_3960	0.38	-4.6
4,444,886	+		PfGW456L13_3960	0.38	-2.6
4,444,886	+		PfGW456L13_3960	0.38	-3.8
4,444,887	-		PfGW456L13_3960	0.38	-2.3
4,445,079	-		PfGW456L13_3960	0.54	-3.1
4,445,079	-		PfGW456L13_3960	0.54	-2.7