Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
8,041	+		PfGW456L13_3	0.39	-1.5
8,081	+		PfGW456L13_3	0.42	-0.4
8,081	+		PfGW456L13_3	0.42	-0.6
8,081	+		PfGW456L13_3	0.42	-1.4
8,081	+		PfGW456L13_3	0.42	-1.5
8,081	+		PfGW456L13_3	0.42	-0.8
8,081	+		PfGW456L13_3	0.42	-1.6
8,081	+		PfGW456L13_3	0.42	-2.7
8,081	+		PfGW456L13_3	0.42	-0.7
8,081	+		PfGW456L13_3	0.42	+0.5
8,081	+		PfGW456L13_3	0.42	-0.3
8,082	-		PfGW456L13_3	0.42	-1.7
8,082	-		PfGW456L13_3	0.42	-1.8
8,082	-		PfGW456L13_3	0.42	-0.7
8,082	-		PfGW456L13_3	0.42	-0.9
8,082	-		PfGW456L13_3	0.42	-0.2
8,142	+		PfGW456L13_3	0.46	-0.9
8,143	-		PfGW456L13_3	0.46	-0.6
8,289	+		PfGW456L13_3	0.57	-1.8
8,290	-		PfGW456L13_3	0.57	-1.4
8,290	-		PfGW456L13_3	0.57	-1.0
8,467	-		PfGW456L13_3	0.70	-2.5
8,596	-		PfGW456L13_3	0.80	-1.5
8,706	+		PfGW456L13_3	0.88	+0.1
8,706	+		PfGW456L13_3	0.88	-1.2
8,706	+		PfGW456L13_3	0.88	-1.4
8,706	+		PfGW456L13_3	0.88	-0.6
8,706	+		PfGW456L13_3	0.88	-0.1
8,706	+		PfGW456L13_3	0.88	-2.4
8,706	+		PfGW456L13_3	0.88	+0.9
8,706	+		PfGW456L13_3	0.88	-2.3
8,706	+		PfGW456L13_3	0.88	-0.7
8,706	+		PfGW456L13_3	0.88	-0.5
8,706	+		PfGW456L13_3	0.88	+1.6
8,706	+		PfGW456L13_3	0.88	-3.2
8,706	+		PfGW456L13_3	0.88	-0.5
8,706	+		PfGW456L13_3	0.88	-1.4
8,707	-		PfGW456L13_3	0.88	-1.7
8,707	-		PfGW456L13_3	0.88	-0.7
8,707	-		PfGW456L13_3	0.88	-0.6
8,707	-		PfGW456L13_3	0.88	+0.1
8,707	-		PfGW456L13_3	0.88	+0.3
8,707	-		PfGW456L13_3	0.88	-1.0
8,707	-		PfGW456L13_3	0.88	-1.2
8,707	-		PfGW456L13_3	0.88	-1.3
8,708	+		PfGW456L13_3	0.88	-2.1
8,708	+		PfGW456L13_3	0.88	+0.2
8,708	+		PfGW456L13_3	0.88	-1.0
8,708	+		PfGW456L13_3	0.88	-0.8
8,708	+		PfGW456L13_3	0.88	-0.5
8,708	+		PfGW456L13_3	0.88	-1.3
8,708	+		PfGW456L13_3	0.88	-0.9
8,708	+		PfGW456L13_3	0.88	-0.7
8,708	+		PfGW456L13_3	0.88	-1.4
8,708	+		PfGW456L13_3	0.88	-1.6
8,708	+		PfGW456L13_3	0.88	+0.1
8,708	+		PfGW456L13_3	0.88	-0.7
8,709	-		PfGW456L13_3	0.88	-0.0
8,709	-		PfGW456L13_3	0.88	-2.7
8,709	-		PfGW456L13_3	0.88	-1.4
8,709	-		PfGW456L13_3	0.88	-0.2
8,709	-		PfGW456L13_3	0.88	-0.2
8,709	-		PfGW456L13_3	0.88	-2.7
8,709	-		PfGW456L13_3	0.88	-0.6
8,709	-		PfGW456L13_3	0.88	-1.4
8,709	-		PfGW456L13_3	0.88	+0.4
8,709	-		PfGW456L13_3	0.88	-2.0
8,709	-		PfGW456L13_3	0.88	+0.1
8,709	-		PfGW456L13_3	0.88	-0.3
8,709	-		PfGW456L13_3	0.88	-0.5
8,709	-		PfGW456L13_3	0.88	-0.9
8,796	+				-1.0
8,796	+				+0.4
8,797	-				-0.5
8,797	-				-0.9
8,797	-				-0.9
8,872	+				-0.8
8,872	+				-0.4
8,888	+				-1.5
8,888	+				-2.6
8,889	-				+0.1
9,052	+				-2.1
9,239	+		PfGW456L13_4	0.25	-0.9
9,240	-		PfGW456L13_4	0.26	-0.3
9,261	+		PfGW456L13_4	0.28	+0.4
9,262	-		PfGW456L13_4	0.28	-0.4
9,262	-		PfGW456L13_4	0.28	-0.4
9,262	-		PfGW456L13_4	0.28	-0.2
9,262	-		PfGW456L13_4	0.28	-0.8
9,262	-		PfGW456L13_4	0.28	-1.0
9,262	-		PfGW456L13_4	0.28	+0.4
9,524	+		PfGW456L13_4	0.56	-0.8
9,536	+		PfGW456L13_4	0.58	+0.2
9,536	+		PfGW456L13_4	0.58	-0.0
9,536	+		PfGW456L13_4	0.58	-1.9
9,537	-		PfGW456L13_4	0.58	-0.3
9,537	-		PfGW456L13_4	0.58	-0.1
9,537	-		PfGW456L13_4	0.58	-0.9
9,539	-		PfGW456L13_4	0.58	-0.3
9,539	-		PfGW456L13_4	0.58	-0.2
9,557	+		PfGW456L13_4	0.60	-0.1
9,557	+		PfGW456L13_4	0.60	-0.8
9,557	+		PfGW456L13_4	0.60	-0.5
9,557	+		PfGW456L13_4	0.60	-0.5
9,558	-		PfGW456L13_4	0.60	-1.3
9,558	-		PfGW456L13_4	0.60	-1.1
9,584	+		PfGW456L13_4	0.63	-0.6
9,584	+		PfGW456L13_4	0.63	-1.4
9,585	-		PfGW456L13_4	0.63	-1.0
9,585	-		PfGW456L13_4	0.63	-0.1
9,585	-		PfGW456L13_4	0.63	-0.9
9,622	+		PfGW456L13_4	0.67	-1.9
9,623	-		PfGW456L13_4	0.67	-2.3
9,749	+		PfGW456L13_4	0.81	-0.9
9,749	+		PfGW456L13_4	0.81	-0.5
9,749	+		PfGW456L13_4	0.81	-1.1
9,749	+		PfGW456L13_4	0.81	-0.3
9,750	-		PfGW456L13_4	0.81	+1.3
9,750	-		PfGW456L13_4	0.81	-0.8
9,750	-		PfGW456L13_4	0.81	-1.2
9,750	-		PfGW456L13_4	0.81	-0.7
9,750	-		PfGW456L13_4	0.81	-0.7
9,750	-		PfGW456L13_4	0.81	-0.7
9,773	+		PfGW456L13_4	0.83	-0.9
9,774	-		PfGW456L13_4	0.83	+0.3
9,833	+		PfGW456L13_4	0.90	-0.7
9,833	+		PfGW456L13_4	0.90	+0.3
9,833	+		PfGW456L13_4	0.90	-0.9
9,833	+		PfGW456L13_4	0.90	-0.6
9,833	+		PfGW456L13_4	0.90	-2.3
9,833	+		PfGW456L13_4	0.90	-0.4
9,833	+		PfGW456L13_4	0.90	-1.8
9,833	+		PfGW456L13_4	0.90	-0.7
9,834	-				-0.4
9,834	-				-0.6
9,834	-				-0.3
9,834	-				-0.4
9,834	-				-1.4
9,834	-				-1.2
9,834	-				+0.6
9,834	-				-0.5
9,834	-				+0.2
9,834	-				-1.1
9,944	-				-1.0
9,944	-				+0.5
9,951	+				+0.2
9,951	+				-1.1
9,952	-				+0.1
9,952	-				-0.5
9,984	-				+1.1
9,984	-				+0.2
9,984	-				-0.9
9,984	-				+1.5
9,984	-				-0.7
9,989	-				-0.4
10,030	+				-0.0
10,030	+				+0.1
10,030	+				+1.1
10,030	+				-0.2
10,031	-				-0.2
10,031	-				-0.1
10,031	-				-0.4
10,031	-				-0.7
10,031	-				+0.4
10,031	-				+1.3
10,031	-				+0.5
10,031	-				-0.0
10,031	-				+0.1
10,031	-				+0.4
10,031	-				-0.4
10,140	-		PfGW456L13_5	0.17	-0.0
10,202	+		PfGW456L13_5	0.26	-1.2
10,202	+		PfGW456L13_5	0.26	+1.2
10,202	+		PfGW456L13_5	0.26	+0.5
10,202	+		PfGW456L13_5	0.26	-0.6
10,202	+		PfGW456L13_5	0.26	+0.4
10,202	+		PfGW456L13_5	0.26	+1.0
10,203	-				+1.2
10,203	-		PfGW456L13_5	0.26	-0.4
10,205	+		PfGW456L13_5	0.27	+0.8
10,205	+		PfGW456L13_5	0.27	-0.4
10,205	+		PfGW456L13_5	0.27	-0.9
10,205	+		PfGW456L13_5	0.27	+0.6
10,205	+		PfGW456L13_5	0.27	+0.8
10,205	+		PfGW456L13_5	0.27	-0.4
10,205	+		PfGW456L13_5	0.27	-1.0
10,205	+		PfGW456L13_5	0.27	-0.5
10,205	+		PfGW456L13_5	0.27	+0.1
10,205	+		PfGW456L13_5	0.27	-0.9
10,206	-		PfGW456L13_5	0.27	-0.2
10,206	-		PfGW456L13_5	0.27	-0.1
10,206	-		PfGW456L13_5	0.27	+0.0
10,206	-		PfGW456L13_5	0.27	-0.7
10,206	-		PfGW456L13_5	0.27	-0.7
10,206	-		PfGW456L13_5	0.27	+0.0
10,206	-		PfGW456L13_5	0.27	+0.1
10,206	-		PfGW456L13_5	0.27	-0.6
10,206	-		PfGW456L13_5	0.27	-0.3
10,206	-		PfGW456L13_5	0.27	-0.5
10,206	-		PfGW456L13_5	0.27	-1.2
10,229	+		PfGW456L13_5	0.30	+0.1
10,229	+		PfGW456L13_5	0.30	-0.4
10,229	+		PfGW456L13_5	0.30	+0.1
10,229	+		PfGW456L13_5	0.30	+0.5
10,229	+		PfGW456L13_5	0.30	-0.1
10,230	-		PfGW456L13_5	0.31	-1.1
10,322	+		PfGW456L13_5	0.45	+0.2
10,323	-		PfGW456L13_5	0.45	+0.4
10,418	+		PfGW456L13_5	0.59	-0.4
10,418	+		PfGW456L13_5	0.59	+0.1
10,434	-		PfGW456L13_5	0.62	+0.8
10,490	-		PfGW456L13_5	0.71	+0.1
10,551	-		PfGW456L13_5	0.80	+0.5
10,551	-		PfGW456L13_5	0.80	+0.1
10,679	+				+0.7
10,679	+				+0.8
10,679	+				+0.7
10,679	+				+0.5
10,679	+				+0.4
10,679	+				-0.1
10,679	+				+0.3
10,679	+				+1.2
10,679	+				+0.2
10,679	+				-0.5
10,680	-				+0.1
10,680	-				+0.4
10,680	-				-0.4
10,680	-				+0.7
10,680	-				+0.2
10,680	-				+0.2
10,680	-				+0.7
10,680	-				+0.6
10,680	-				-0.1
10,687	+				-0.5
10,687	+				+0.3
10,687	+				-0.4
10,687	+				+0.4
10,687	+				+0.5
10,687	+				+0.7
10,687	+				-0.4
10,687	+				+0.6
10,687	+				+0.5
10,687	+				-0.1
10,687	+				+0.4
10,687	+				-0.7
10,688	-				+0.8
10,688	-				+0.7
10,688	-				+0.1
10,688	-				-1.2
10,697	-				+0.8
10,697	-				+0.2
10,718	+				-0.3
10,750	+		PfGW456L13_6	0.11	-0.1
10,750	+		PfGW456L13_6	0.11	+0.4
10,751	-		PfGW456L13_6	0.11	+0.3
10,751	-		PfGW456L13_6	0.11	+1.2
10,751	-		PfGW456L13_6	0.11	+0.1