Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_359 and PfGW456L13_360 are separated by 42 nucleotides PfGW456L13_360 and PfGW456L13_361 are separated by 0 nucleotides PfGW456L13_361 and PfGW456L13_362 overlap by 1 nucleotides PfGW456L13_362 and PfGW456L13_363 are separated by 268 nucleotides
PfGW456L13_359 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) <small>(from data)</small>, at 419,401 to 420,138
_359
PfGW456L13_360 - FIG00956267: hypothetical protein, at 420,181 to 420,438
_360
PfGW456L13_361 - Imidazole glycerol phosphate synthase amidotransferase subunit (EC 2.4.2.-), at 420,439 to 421,077
_361
PfGW456L13_362 - Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 421,077 to 421,670
_362
PfGW456L13_363 - MFS permease, at 421,939 to 423,603
_363
Position (kb) 421
422 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 420.111 kb on + strand at 420.112 kb on - strand at 420.129 kb on + strand at 420.130 kb on - strand at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.269 kb on + strand, within PfGW456L13_360 at 420.270 kb on - strand, within PfGW456L13_360 at 420.270 kb on - strand, within PfGW456L13_360 at 420.272 kb on + strand, within PfGW456L13_360 at 420.273 kb on - strand, within PfGW456L13_360 at 420.440 kb on + strand at 420.441 kb on - strand at 420.493 kb on - strand at 420.566 kb on + strand, within PfGW456L13_361 at 420.567 kb on - strand, within PfGW456L13_361 at 420.567 kb on - strand, within PfGW456L13_361 at 420.567 kb on - strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.611 kb on + strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.612 kb on - strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.614 kb on + strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 420.615 kb on - strand, within PfGW456L13_361 at 421.078 kb on + strand at 421.303 kb on + strand, within PfGW456L13_362 at 421.303 kb on + strand, within PfGW456L13_362 at 421.303 kb on + strand, within PfGW456L13_362 at 421.304 kb on - strand, within PfGW456L13_362 at 421.381 kb on + strand, within PfGW456L13_362 at 421.381 kb on + strand, within PfGW456L13_362 at 421.381 kb on + strand, within PfGW456L13_362 at 421.382 kb on - strand, within PfGW456L13_362 at 421.382 kb on - strand, within PfGW456L13_362 at 421.382 kb on - strand, within PfGW456L13_362 at 421.452 kb on - strand, within PfGW456L13_362 at 421.484 kb on + strand, within PfGW456L13_362 at 421.485 kb on - strand, within PfGW456L13_362 at 421.485 kb on - strand, within PfGW456L13_362 at 421.508 kb on + strand, within PfGW456L13_362 at 421.508 kb on + strand, within PfGW456L13_362 at 421.658 kb on + strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.659 kb on - strand at 421.712 kb on - strand at 421.713 kb on + strand at 421.713 kb on + strand at 421.714 kb on - strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.787 kb on + strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.788 kb on - strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.797 kb on + strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.798 kb on - strand at 421.940 kb on + strand at 421.941 kb on - strand at 422.135 kb on + strand, within PfGW456L13_363 at 422.135 kb on + strand, within PfGW456L13_363 at 422.135 kb on + strand at 422.135 kb on + strand, within PfGW456L13_363 at 422.135 kb on + strand, within PfGW456L13_363 at 422.136 kb on - strand, within PfGW456L13_363 at 422.136 kb on - strand, within PfGW456L13_363 at 422.136 kb on - strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.204 kb on + strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.205 kb on - strand, within PfGW456L13_363 at 422.219 kb on + strand, within PfGW456L13_363 at 422.219 kb on + strand, within PfGW456L13_363 at 422.219 kb on + strand, within PfGW456L13_363 at 422.219 kb on + strand, within PfGW456L13_363 at 422.220 kb on - strand, within PfGW456L13_363 at 422.220 kb on - strand, within PfGW456L13_363 at 422.220 kb on - strand, within PfGW456L13_363 at 422.248 kb on + strand, within PfGW456L13_363 at 422.248 kb on + strand, within PfGW456L13_363 at 422.248 kb on + strand, within PfGW456L13_363 at 422.248 kb on + strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.249 kb on - strand, within PfGW456L13_363 at 422.255 kb on + strand, within PfGW456L13_363 at 422.255 kb on + strand, within PfGW456L13_363 at 422.267 kb on + strand, within PfGW456L13_363 at 422.267 kb on + strand, within PfGW456L13_363 at 422.267 kb on + strand, within PfGW456L13_363 at 422.267 kb on + strand, within PfGW456L13_363 at 422.267 kb on + strand, within PfGW456L13_363 at 422.267 kb on + strand, within PfGW456L13_363 at 422.268 kb on - strand, within PfGW456L13_363 at 422.268 kb on - strand, within PfGW456L13_363 at 422.268 kb on - strand, within PfGW456L13_363 at 422.268 kb on - strand, within PfGW456L13_363 at 422.268 kb on - strand, within PfGW456L13_363 at 422.268 kb on - strand, within PfGW456L13_363 at 422.349 kb on + strand, within PfGW456L13_363 at 422.399 kb on + strand, within PfGW456L13_363 at 422.399 kb on + strand, within PfGW456L13_363 at 422.399 kb on + strand, within PfGW456L13_363 at 422.400 kb on - strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.510 kb on + strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.511 kb on - strand, within PfGW456L13_363 at 422.531 kb on + strand, within PfGW456L13_363
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 420,111 + -1.8 420,112 - -4.8 420,129 + -1.8 420,130 - -4.0 420,269 + PfGW456L13_360 0.34 -3.3 420,269 + PfGW456L13_360 0.34 -4.1 420,269 + PfGW456L13_360 0.34 -3.5 420,269 + PfGW456L13_360 0.34 -3.2 420,269 + PfGW456L13_360 0.34 -1.5 420,270 - PfGW456L13_360 0.34 -0.3 420,270 - PfGW456L13_360 0.34 -0.1 420,272 + PfGW456L13_360 0.35 -3.2 420,273 - PfGW456L13_360 0.36 -0.6 420,440 + -3.4 420,441 - -0.5 420,493 - -2.8 420,566 + PfGW456L13_361 0.20 -2.7 420,567 - PfGW456L13_361 0.20 -3.5 420,567 - PfGW456L13_361 0.20 -0.2 420,567 - PfGW456L13_361 0.20 -1.3 420,611 + PfGW456L13_361 0.27 -3.6 420,611 + PfGW456L13_361 0.27 -4.5 420,611 + PfGW456L13_361 0.27 -2.9 420,611 + PfGW456L13_361 0.27 -3.5 420,611 + PfGW456L13_361 0.27 -3.7 420,611 + PfGW456L13_361 0.27 -3.8 420,611 + PfGW456L13_361 0.27 -2.6 420,612 - PfGW456L13_361 0.27 -3.3 420,612 - PfGW456L13_361 0.27 -1.8 420,612 - PfGW456L13_361 0.27 -3.1 420,612 - PfGW456L13_361 0.27 -4.3 420,612 - PfGW456L13_361 0.27 -3.3 420,612 - PfGW456L13_361 0.27 -3.5 420,612 - PfGW456L13_361 0.27 -2.0 420,612 - PfGW456L13_361 0.27 -4.4 420,612 - PfGW456L13_361 0.27 -2.7 420,612 - PfGW456L13_361 0.27 -3.8 420,612 - PfGW456L13_361 0.27 -3.7 420,612 - PfGW456L13_361 0.27 -3.2 420,612 - PfGW456L13_361 0.27 -2.7 420,614 + PfGW456L13_361 0.27 -3.0 420,614 + PfGW456L13_361 0.27 -4.7 420,614 + PfGW456L13_361 0.27 -2.5 420,614 + PfGW456L13_361 0.27 -4.4 420,614 + PfGW456L13_361 0.27 -3.0 420,614 + PfGW456L13_361 0.27 +0.8 420,614 + PfGW456L13_361 0.27 -3.0 420,614 + PfGW456L13_361 0.27 -1.9 420,615 - PfGW456L13_361 0.28 -3.4 420,615 - PfGW456L13_361 0.28 -1.2 420,615 - PfGW456L13_361 0.28 -4.4 420,615 - PfGW456L13_361 0.28 -3.4 420,615 - PfGW456L13_361 0.28 -3.3 420,615 - PfGW456L13_361 0.28 -2.4 420,615 - PfGW456L13_361 0.28 -2.1 421,078 + -3.0 421,303 + PfGW456L13_362 0.38 -2.1 421,303 + PfGW456L13_362 0.38 -3.8 421,303 + PfGW456L13_362 0.38 -3.0 421,304 - PfGW456L13_362 0.38 -3.4 421,381 + PfGW456L13_362 0.51 -3.9 421,381 + PfGW456L13_362 0.51 -3.0 421,381 + PfGW456L13_362 0.51 -3.5 421,382 - PfGW456L13_362 0.51 -3.4 421,382 - PfGW456L13_362 0.51 -3.4 421,382 - PfGW456L13_362 0.51 -3.7 421,452 - PfGW456L13_362 0.63 -1.7 421,484 + PfGW456L13_362 0.69 -3.9 421,485 - PfGW456L13_362 0.69 -4.2 421,485 - PfGW456L13_362 0.69 -3.9 421,508 + PfGW456L13_362 0.73 -4.2 421,508 + PfGW456L13_362 0.73 -2.9 421,658 + -3.1 421,659 - -3.0 421,659 - -2.5 421,659 - -4.5 421,659 - -3.6 421,659 - -3.5 421,712 - -0.6 421,713 + -1.0 421,713 + -0.3 421,714 - -0.6 421,787 + -0.5 421,787 + +1.2 421,787 + +0.5 421,787 + +0.2 421,787 + -0.2 421,787 + +0.2 421,787 + -1.3 421,787 + -0.9 421,787 + -0.8 421,787 + +0.9 421,787 + +0.2 421,787 + +0.2 421,787 + +1.0 421,787 + +0.7 421,787 + -0.1 421,787 + +0.1 421,787 + +1.7 421,787 + +0.3 421,787 + +0.2 421,787 + +0.1 421,787 + -0.5 421,787 + -0.3 421,787 + +1.0 421,788 - +0.5 421,788 - +0.3 421,788 - -0.6 421,788 - -0.6 421,788 - -1.7 421,788 - +1.6 421,788 - +0.7 421,788 - -0.8 421,788 - +0.1 421,788 - -0.2 421,788 - -0.6 421,788 - +0.7 421,788 - +0.3 421,788 - +0.5 421,788 - +0.4 421,788 - +0.5 421,788 - +0.2 421,788 - -0.4 421,788 - -0.8 421,797 + +0.6 421,797 + -1.7 421,797 + +0.8 421,797 + +0.8 421,797 + +0.4 421,797 + -0.9 421,797 + -0.1 421,797 + -0.3 421,797 + +0.3 421,798 - +0.9 421,798 - -0.6 421,798 - +1.0 421,798 - -0.7 421,798 - +0.5 421,798 - +1.1 421,798 - +0.4 421,798 - +0.5 421,940 + -0.4 421,941 - +0.0 422,135 + PfGW456L13_363 0.12 +0.8 422,135 + PfGW456L13_363 0.12 +1.8 422,135 + -0.6 422,135 + PfGW456L13_363 0.12 +0.2 422,135 + PfGW456L13_363 0.12 +1.2 422,136 - PfGW456L13_363 0.12 +0.5 422,136 - PfGW456L13_363 0.12 +0.8 422,136 - PfGW456L13_363 0.12 -0.1 422,204 + PfGW456L13_363 0.16 -0.9 422,204 + PfGW456L13_363 0.16 -0.6 422,204 + PfGW456L13_363 0.16 -0.5 422,204 + PfGW456L13_363 0.16 -1.9 422,204 + PfGW456L13_363 0.16 +0.9 422,204 + PfGW456L13_363 0.16 -0.3 422,204 + PfGW456L13_363 0.16 -0.4 422,204 + PfGW456L13_363 0.16 -0.6 422,205 - PfGW456L13_363 0.16 -2.6 422,205 - PfGW456L13_363 0.16 +0.0 422,205 - PfGW456L13_363 0.16 -0.5 422,205 - PfGW456L13_363 0.16 +1.0 422,205 - PfGW456L13_363 0.16 +1.2 422,205 - PfGW456L13_363 0.16 +0.0 422,205 - PfGW456L13_363 0.16 -0.4 422,219 + PfGW456L13_363 0.17 -0.6 422,219 + PfGW456L13_363 0.17 -0.5 422,219 + PfGW456L13_363 0.17 +0.7 422,219 + PfGW456L13_363 0.17 +0.4 422,220 - PfGW456L13_363 0.17 -1.5 422,220 - PfGW456L13_363 0.17 -0.5 422,220 - PfGW456L13_363 0.17 +0.8 422,248 + PfGW456L13_363 0.19 -1.2 422,248 + PfGW456L13_363 0.19 -0.3 422,248 + PfGW456L13_363 0.19 +0.2 422,248 + PfGW456L13_363 0.19 -0.4 422,249 - PfGW456L13_363 0.19 -2.0 422,249 - PfGW456L13_363 0.19 +0.1 422,249 - PfGW456L13_363 0.19 +0.6 422,249 - PfGW456L13_363 0.19 -1.1 422,249 - PfGW456L13_363 0.19 +0.2 422,249 - PfGW456L13_363 0.19 +0.9 422,249 - PfGW456L13_363 0.19 +0.8 422,249 - PfGW456L13_363 0.19 +0.2 422,255 + PfGW456L13_363 0.19 +0.8 422,255 + PfGW456L13_363 0.19 -0.5 422,267 + PfGW456L13_363 0.20 +0.9 422,267 + PfGW456L13_363 0.20 +0.9 422,267 + PfGW456L13_363 0.20 +0.8 422,267 + PfGW456L13_363 0.20 -1.3 422,267 + PfGW456L13_363 0.20 -0.3 422,267 + PfGW456L13_363 0.20 +0.8 422,268 - PfGW456L13_363 0.20 +0.0 422,268 - PfGW456L13_363 0.20 -0.3 422,268 - PfGW456L13_363 0.20 -0.3 422,268 - PfGW456L13_363 0.20 +0.8 422,268 - PfGW456L13_363 0.20 +0.2 422,268 - PfGW456L13_363 0.20 +0.7 422,349 + PfGW456L13_363 0.25 -0.5 422,399 + PfGW456L13_363 0.28 +1.0 422,399 + PfGW456L13_363 0.28 -1.7 422,399 + PfGW456L13_363 0.28 -1.2 422,400 - PfGW456L13_363 0.28 +0.4 422,510 + PfGW456L13_363 0.34 -0.1 422,510 + PfGW456L13_363 0.34 -0.2 422,510 + PfGW456L13_363 0.34 +0.1 422,510 + PfGW456L13_363 0.34 +0.1 422,510 + PfGW456L13_363 0.34 -0.8 422,510 + PfGW456L13_363 0.34 +0.9 422,510 + PfGW456L13_363 0.34 -0.0 422,511 - PfGW456L13_363 0.34 +0.4 422,511 - PfGW456L13_363 0.34 +0.3 422,511 - PfGW456L13_363 0.34 +0.9 422,511 - PfGW456L13_363 0.34 +0.0 422,511 - PfGW456L13_363 0.34 +0.3 422,511 - PfGW456L13_363 0.34 +0.1 422,511 - PfGW456L13_363 0.34 +0.2 422,511 - PfGW456L13_363 0.34 -0.2 422,511 - PfGW456L13_363 0.34 -0.2 422,531 + PfGW456L13_363 0.36 +1.1
Or see this region's nucleotide sequence