Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
6,523	-		PfGW456L13_2	0.45	-1.3
6,642	+		PfGW456L13_2	0.53	-0.2
6,642	+		PfGW456L13_2	0.53	-0.7
6,643	-		PfGW456L13_2	0.53	+0.1
6,648	+		PfGW456L13_2	0.54	-0.2
6,648	+		PfGW456L13_2	0.54	-0.7
6,648	+		PfGW456L13_2	0.54	-0.9
6,648	+		PfGW456L13_2	0.54	-1.2
6,648	+		PfGW456L13_2	0.54	-1.0
6,648	+		PfGW456L13_2	0.54	+2.0
6,648	+		PfGW456L13_2	0.54	+0.3
6,648	+		PfGW456L13_2	0.54	-2.3
6,648	+		PfGW456L13_2	0.54	-1.5
6,648	+		PfGW456L13_2	0.54	-2.0
6,648	+		PfGW456L13_2	0.54	-1.1
6,648	+		PfGW456L13_2	0.54	-0.5
6,649	-		PfGW456L13_2	0.54	-1.1
6,649	-		PfGW456L13_2	0.54	+0.2
6,649	-		PfGW456L13_2	0.54	+0.1
6,649	-		PfGW456L13_2	0.54	-2.4
6,649	-		PfGW456L13_2	0.54	-0.7
6,833	-		PfGW456L13_2	0.66	-0.7
6,864	+		PfGW456L13_2	0.68	-0.1
6,864	+		PfGW456L13_2	0.68	-0.9
6,864	+		PfGW456L13_2	0.68	-2.1
6,865	-		PfGW456L13_2	0.68	-1.0
6,975	+		PfGW456L13_2	0.76	-0.5
6,975	+		PfGW456L13_2	0.76	-0.9
6,976	-		PfGW456L13_2	0.76	-0.1
7,250	-				-0.2
7,331	-				-1.1
7,388	+				-0.2
7,388	+				-1.2
7,388	+				-0.7
7,388	+				+0.3
7,388	+				-0.6
7,388	+				+0.3
7,388	+				-0.4
7,388	+				-0.5
7,388	+				-0.4
7,388	+				-0.6
7,389	-				-0.9
7,389	-				-0.9
7,389	-				+0.6
7,389	-				+1.1
7,389	-				-0.7
7,389	-				-0.5
7,390	+				+0.1
7,390	+				+0.1
7,390	+				-1.2
7,390	+				-0.9
7,390	+				-0.9
7,390	+				-2.5
7,391	-				-0.4
7,391	-				+0.8
7,392	+				-1.0
7,392	+				+1.1
7,392	+				-0.7
7,392	+				+0.2
7,392	+				+0.8
7,392	+				-0.9
7,392	+				+0.7
7,392	+				-1.0
7,392	+				+0.3
7,392	+				-0.5
7,392	+				-1.0
7,392	+				+0.0
7,392	+				-1.1
7,392	+				-0.5
7,392	+				-0.2
7,392	+				-1.6
7,392	+				-0.5
7,392	+				+1.8
7,392	+				-0.3
7,392	+				-0.6
7,392	+				-0.9
7,392	+				-0.4
7,393	-				-0.2
7,393	-				-0.1
7,393	-				+0.0
7,393	-				+0.6
7,393	-				-0.1
7,393	-				-1.5
7,393	-				-0.1
7,393	-				+0.1
7,393	-				+2.6
7,393	-				-0.9
7,393	-				+0.8
7,393	-				-0.1
7,393	-				-0.1
7,393	-				+0.0
7,393	-				+0.1
7,393	-				-1.0
7,393	-				-1.4
7,393	-				+0.4
7,393	-				+0.3
7,393	-				+0.5
7,465	+				-0.2
7,472	+				-0.3
7,472	+				+0.9
7,473	-				+1.1
7,473	-				-0.4
7,499	+				-1.4
7,499	+				-0.3
7,499	+				-0.9
7,499	+				-1.2
7,500	-				-0.3
7,625	+				-1.3
7,625	+				-2.4
7,625	+				-0.6
7,625	+				-0.9
7,626	-				-1.1
7,626	-				-1.0
7,629	+				-1.7
7,629	+				-1.0
7,629	+				-1.0
7,629	+				-1.9
7,629	+				-0.5
7,629	+				-0.8
7,629	+				-1.0
7,630	-				-2.2
7,630	-				-2.6
7,630	-				-1.1
7,630	-				-1.3
7,630	-				-0.9
7,630	-				-1.1
7,630	-				-2.2
7,630	-				-2.6
7,630	-				-1.1
7,630	-				-1.3
7,630	-				-0.6
7,725	+		PfGW456L13_3	0.15	-2.3
7,726	-		PfGW456L13_3	0.15	-1.6
7,811	+		PfGW456L13_3	0.22	-0.9
7,881	+		PfGW456L13_3	0.27	-0.9
7,881	+		PfGW456L13_3	0.27	-0.3
7,881	+		PfGW456L13_3	0.27	-0.0
7,881	+		PfGW456L13_3	0.27	-1.8
7,882	-		PfGW456L13_3	0.27	-1.6
7,882	-		PfGW456L13_3	0.27	-2.3
7,882	-		PfGW456L13_3	0.27	-2.4
7,887	+		PfGW456L13_3	0.27	-1.1
7,944	+		PfGW456L13_3	0.32	-0.4
7,944	+				+1.6
7,944	+		PfGW456L13_3	0.32	+0.0
8,041	+		PfGW456L13_3	0.39	-1.5
8,081	+		PfGW456L13_3	0.42	-0.4
8,081	+		PfGW456L13_3	0.42	-0.6
8,081	+		PfGW456L13_3	0.42	-1.4
8,081	+		PfGW456L13_3	0.42	-1.5
8,081	+		PfGW456L13_3	0.42	-0.8
8,081	+		PfGW456L13_3	0.42	-1.6
8,081	+		PfGW456L13_3	0.42	-2.7
8,081	+		PfGW456L13_3	0.42	-0.7
8,081	+		PfGW456L13_3	0.42	+0.5
8,081	+		PfGW456L13_3	0.42	-0.3
8,082	-		PfGW456L13_3	0.42	-1.7
8,082	-		PfGW456L13_3	0.42	-1.8
8,082	-		PfGW456L13_3	0.42	-0.7
8,082	-		PfGW456L13_3	0.42	-0.9
8,082	-		PfGW456L13_3	0.42	-0.2
8,142	+		PfGW456L13_3	0.46	-0.9
8,143	-		PfGW456L13_3	0.46	-0.6
8,289	+		PfGW456L13_3	0.57	-1.8
8,290	-		PfGW456L13_3	0.57	-1.4
8,290	-		PfGW456L13_3	0.57	-1.0
8,467	-		PfGW456L13_3	0.70	-2.5
8,596	-		PfGW456L13_3	0.80	-1.5
8,706	+		PfGW456L13_3	0.88	+0.1
8,706	+		PfGW456L13_3	0.88	-1.2
8,706	+		PfGW456L13_3	0.88	-1.4
8,706	+		PfGW456L13_3	0.88	-0.6
8,706	+		PfGW456L13_3	0.88	-0.1
8,706	+		PfGW456L13_3	0.88	-2.4
8,706	+		PfGW456L13_3	0.88	+0.9
8,706	+		PfGW456L13_3	0.88	-2.3
8,706	+		PfGW456L13_3	0.88	-0.7
8,706	+		PfGW456L13_3	0.88	-0.5
8,706	+		PfGW456L13_3	0.88	+1.6
8,706	+		PfGW456L13_3	0.88	-3.2
8,706	+		PfGW456L13_3	0.88	-0.5
8,706	+		PfGW456L13_3	0.88	-1.4
8,707	-		PfGW456L13_3	0.88	-1.7
8,707	-		PfGW456L13_3	0.88	-0.7
8,707	-		PfGW456L13_3	0.88	-0.6
8,707	-		PfGW456L13_3	0.88	+0.1
8,707	-		PfGW456L13_3	0.88	+0.3
8,707	-		PfGW456L13_3	0.88	-1.0
8,707	-		PfGW456L13_3	0.88	-1.2
8,707	-		PfGW456L13_3	0.88	-1.3
8,708	+		PfGW456L13_3	0.88	-2.1
8,708	+		PfGW456L13_3	0.88	+0.2
8,708	+		PfGW456L13_3	0.88	-1.0
8,708	+		PfGW456L13_3	0.88	-0.8
8,708	+		PfGW456L13_3	0.88	-0.5
8,708	+		PfGW456L13_3	0.88	-1.3
8,708	+		PfGW456L13_3	0.88	-0.9
8,708	+		PfGW456L13_3	0.88	-0.7
8,708	+		PfGW456L13_3	0.88	-1.4
8,708	+		PfGW456L13_3	0.88	-1.6
8,708	+		PfGW456L13_3	0.88	+0.1
8,708	+		PfGW456L13_3	0.88	-0.7
8,709	-		PfGW456L13_3	0.88	-0.0
8,709	-		PfGW456L13_3	0.88	-2.7
8,709	-		PfGW456L13_3	0.88	-1.4
8,709	-		PfGW456L13_3	0.88	-0.2
8,709	-		PfGW456L13_3	0.88	-0.2
8,709	-		PfGW456L13_3	0.88	-2.7
8,709	-		PfGW456L13_3	0.88	-0.6
8,709	-		PfGW456L13_3	0.88	-1.4
8,709	-		PfGW456L13_3	0.88	+0.4
8,709	-		PfGW456L13_3	0.88	-2.0
8,709	-		PfGW456L13_3	0.88	+0.1
8,709	-		PfGW456L13_3	0.88	-0.3
8,709	-		PfGW456L13_3	0.88	-0.5
8,709	-		PfGW456L13_3	0.88	-0.9
8,796	+				-1.0
8,796	+				+0.4
8,797	-				-0.5
8,797	-				-0.9
8,797	-				-0.9
8,872	+				-0.8
8,872	+				-0.4
8,888	+				-1.5
8,888	+				-2.6
8,889	-				+0.1
9,052	+				-2.1
9,239	+		PfGW456L13_4	0.25	-0.9
9,240	-		PfGW456L13_4	0.26	-0.3
9,261	+		PfGW456L13_4	0.28	+0.4
9,262	-		PfGW456L13_4	0.28	-0.4
9,262	-		PfGW456L13_4	0.28	-0.4
9,262	-		PfGW456L13_4	0.28	-0.2
9,262	-		PfGW456L13_4	0.28	-0.8
9,262	-		PfGW456L13_4	0.28	-1.0
9,262	-		PfGW456L13_4	0.28	+0.4
9,524	+		PfGW456L13_4	0.56	-0.8
9,536	+		PfGW456L13_4	0.58	+0.2
9,536	+		PfGW456L13_4	0.58	-0.0
9,536	+		PfGW456L13_4	0.58	-1.9
9,537	-		PfGW456L13_4	0.58	-0.3
9,537	-		PfGW456L13_4	0.58	-0.1
9,537	-		PfGW456L13_4	0.58	-0.9
9,539	-		PfGW456L13_4	0.58	-0.3
9,539	-		PfGW456L13_4	0.58	-0.2
9,557	+		PfGW456L13_4	0.60	-0.1
9,557	+		PfGW456L13_4	0.60	-0.8
9,557	+		PfGW456L13_4	0.60	-0.5
9,557	+		PfGW456L13_4	0.60	-0.5
9,558	-		PfGW456L13_4	0.60	-1.3
9,558	-		PfGW456L13_4	0.60	-1.1
9,584	+		PfGW456L13_4	0.63	-0.6
9,584	+		PfGW456L13_4	0.63	-1.4
9,585	-		PfGW456L13_4	0.63	-1.0
9,585	-		PfGW456L13_4	0.63	-0.1
9,585	-		PfGW456L13_4	0.63	-0.9
9,622	+		PfGW456L13_4	0.67	-1.9
9,623	-		PfGW456L13_4	0.67	-2.3
9,749	+		PfGW456L13_4	0.81	-0.9
9,749	+		PfGW456L13_4	0.81	-0.5
9,749	+		PfGW456L13_4	0.81	-1.1
9,749	+		PfGW456L13_4	0.81	-0.3
9,750	-		PfGW456L13_4	0.81	+1.3
9,750	-		PfGW456L13_4	0.81	-0.8
9,750	-		PfGW456L13_4	0.81	-1.2
9,750	-		PfGW456L13_4	0.81	-0.7
9,750	-		PfGW456L13_4	0.81	-0.7
9,750	-		PfGW456L13_4	0.81	-0.7
9,773	+		PfGW456L13_4	0.83	-0.9
9,774	-		PfGW456L13_4	0.83	+0.3
9,833	+		PfGW456L13_4	0.90	-0.7
9,833	+		PfGW456L13_4	0.90	+0.3
9,833	+		PfGW456L13_4	0.90	-0.9
9,833	+		PfGW456L13_4	0.90	-0.6
9,833	+		PfGW456L13_4	0.90	-2.3
9,833	+		PfGW456L13_4	0.90	-0.4
9,833	+		PfGW456L13_4	0.90	-1.8
9,833	+		PfGW456L13_4	0.90	-0.7
9,834	-				-0.4
9,834	-				-0.6
9,834	-				-0.3
9,834	-				-0.4
9,834	-				-1.4
9,834	-				-1.2
9,834	-				+0.6
9,834	-				-0.5
9,834	-				+0.2
9,834	-				-1.1