Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2957

Experiment: Cytosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cytosine (N)
3,299,354	+				-0.5
3,299,354	+				+0.1
3,299,354	+				+1.3
3,299,354	+				-0.8
3,299,354	+				-1.3
3,299,354	+				+0.2
3,299,354	+				-0.6
3,299,354	+				+0.1
3,299,354	+				-0.8
3,299,354	+				+0.1
3,299,354	+				+0.6
3,299,354	+				-0.2
3,299,354	+				+0.3
3,299,354	+				-1.4
3,299,354	+				-0.1
3,299,354	+				-1.0
3,299,354	+				+0.9
3,299,354	+				+0.6
3,299,354	+				-0.6
3,299,354	+				-0.7
3,299,354	+				-0.2
3,299,354	+				-1.3
3,299,354	+				+0.1
3,299,354	+				-0.3
3,299,354	+				+0.6
3,299,354	+				-0.3
3,299,354	+				-0.4
3,299,354	+				+0.3
3,299,354	+				+0.5
3,299,355	-				+0.3
3,299,355	-				+0.1
3,299,355	-				+0.7
3,299,355	-				+0.2
3,299,355	-				+0.4
3,299,355	-				-0.7
3,299,355	-				+0.2
3,299,355	-				-0.3
3,299,355	-				+0.5
3,299,355	-				+1.2
3,299,355	-				+0.0
3,299,355	-				+0.4
3,299,355	-				+0.1
3,299,355	-				+1.1
3,299,355	-				-1.7
3,299,355	-				-0.0
3,299,355	-				-0.6
3,299,355	-				-1.3
3,299,355	-				+0.8
3,299,355	-				+0.2
3,299,355	-				+0.1
3,299,355	-				+0.0
3,299,355	-				-0.3
3,299,355	-				+0.1
3,299,355	-				+1.6
3,299,355	-				-0.2
3,299,355	-				-0.1
3,299,355	-				+0.3
3,299,355	-				-1.0
3,299,355	-				-0.1
3,299,355	-				+0.1
3,299,355	-				+0.2
3,299,357	+				-0.9
3,299,366	-				+0.3
3,299,366	-				+0.5
3,299,366	-				-0.1
3,299,383	+				+1.1
3,299,384	-				+0.8
3,299,440	-				+2.8
3,299,449	-				+0.7
3,299,470	+				-0.7
3,299,470	+				+0.2
3,299,470	+				-0.6
3,299,470	+				+0.1
3,299,470	+				-0.6
3,299,470	+				+0.2
3,299,470	+				+0.6
3,299,471	-				-0.3
3,299,471	-				+0.0
3,299,471	-				+0.3
3,299,471	-				+0.4
3,299,471	-				+0.1
3,299,471	-				-0.2
3,299,471	-				+1.3
3,299,471	-				+0.5
3,299,471	-				+0.3
3,299,471	-				-0.2
3,299,471	-				+0.4
3,299,472	+				+0.1
3,299,473	-				+0.4
3,299,493	+				-0.4
3,299,505	+				-0.9
3,299,505	+				-0.6
3,299,612	+				+0.6
3,299,612	+				+0.1
3,299,612	+				+0.9
3,299,721	+		PfGW456L13_2956	0.11	-0.4
3,299,722	-		PfGW456L13_2956	0.11	+0.4
3,299,940	+				-0.8
3,299,941	-		PfGW456L13_2956	0.42	-0.3
3,299,941	-		PfGW456L13_2956	0.42	+0.4
3,299,941	-		PfGW456L13_2956	0.42	-0.0
3,300,123	+		PfGW456L13_2956	0.68	-1.4
3,300,124	-		PfGW456L13_2956	0.68	-0.7
3,300,124	-		PfGW456L13_2956	0.68	+0.0
3,300,166	+		PfGW456L13_2956	0.74	-0.4
3,300,166	+		PfGW456L13_2956	0.74	+1.0
3,300,166	+		PfGW456L13_2956	0.74	-1.7
3,300,166	+		PfGW456L13_2956	0.74	-0.8
3,300,166	+		PfGW456L13_2956	0.74	+0.8
3,300,166	+		PfGW456L13_2956	0.74	-0.9
3,300,167	-		PfGW456L13_2956	0.74	-0.9
3,300,167	-		PfGW456L13_2956	0.74	-0.1
3,300,167	-		PfGW456L13_2956	0.74	-0.7
3,300,167	-		PfGW456L13_2956	0.74	+0.1
3,300,315	+				-0.3
3,300,315	+				-0.8
3,300,315	+				-1.1
3,300,315	+				+0.1
3,300,376	+				+0.2
3,300,376	+				+0.1
3,300,377	-				-0.2
3,300,377	-				+0.0
3,300,377	-				+0.4
3,300,412	+				-3.0
3,300,412	+				+1.2
3,300,412	+				+0.0
3,300,412	+				+0.4
3,300,412	+				+0.4
3,300,413	-				-1.2
3,300,413	-				-1.3
3,300,463	+				+1.2
3,300,463	+				+1.9
3,300,463	+				+0.2
3,300,463	+				+0.3
3,300,463	+				+0.4
3,300,464	-				-0.9
3,300,464	-				+0.2
3,300,464	-				-0.9
3,300,766	+		PfGW456L13_2957	0.32	-0.4
3,300,767	-		PfGW456L13_2957	0.32	+0.6
3,301,163	-		PfGW456L13_2957	0.62	-0.2
3,301,376	-		PfGW456L13_2957	0.79	-2.3
3,301,389	+		PfGW456L13_2957	0.80	-0.7
3,301,390	-		PfGW456L13_2957	0.80	-0.9
3,301,411	+		PfGW456L13_2957	0.81	-1.9
3,301,412	-		PfGW456L13_2957	0.81	-1.5
3,301,412	-		PfGW456L13_2957	0.81	-0.8
3,301,412	-		PfGW456L13_2957	0.81	+0.0
3,301,412	-		PfGW456L13_2957	0.81	-0.1
3,301,412	-		PfGW456L13_2957	0.81	-1.8
3,301,801	+		PfGW456L13_2958	0.13	-0.6
3,301,802	-		PfGW456L13_2958	0.13	-0.1
3,301,802	-		PfGW456L13_2958	0.13	+0.5
3,301,802	-		PfGW456L13_2958	0.13	+0.3
3,301,903	+		PfGW456L13_2958	0.27	+0.1
3,301,904	-		PfGW456L13_2958	0.27	+0.0
3,301,942	-		PfGW456L13_2958	0.32	+0.3
3,302,083	+		PfGW456L13_2958	0.50	-1.4
3,302,083	+		PfGW456L13_2958	0.50	-0.2
3,302,083	+		PfGW456L13_2958	0.50	+0.6
3,302,083	+		PfGW456L13_2958	0.50	+0.9
3,302,083	+		PfGW456L13_2958	0.50	+0.1
3,302,083	+		PfGW456L13_2958	0.50	-0.7
3,302,084	-				+0.3
3,302,095	+		PfGW456L13_2958	0.52	+0.1
3,302,095	+		PfGW456L13_2958	0.52	-1.2
3,302,096	-		PfGW456L13_2958	0.52	-0.3
3,302,096	-		PfGW456L13_2958	0.52	-1.1
3,302,096	-		PfGW456L13_2958	0.52	-0.2
3,302,096	-		PfGW456L13_2958	0.52	-0.1
3,302,096	-		PfGW456L13_2958	0.52	+0.0
3,302,120	+		PfGW456L13_2958	0.55	-1.5
3,302,120	+		PfGW456L13_2958	0.55	-0.1
3,302,120	+		PfGW456L13_2958	0.55	-0.2
3,302,120	+		PfGW456L13_2958	0.55	-0.2
3,302,120	+		PfGW456L13_2958	0.55	+0.5
3,302,120	+		PfGW456L13_2958	0.55	+0.8
3,302,120	+		PfGW456L13_2958	0.55	-0.2
3,302,120	+		PfGW456L13_2958	0.55	+0.8
3,302,120	+		PfGW456L13_2958	0.55	-0.6
3,302,121	-		PfGW456L13_2958	0.55	-0.3
3,302,121	-		PfGW456L13_2958	0.55	+0.3
3,302,121	-		PfGW456L13_2958	0.55	-0.1
3,302,302	+		PfGW456L13_2958	0.79	-0.3
3,302,302	+		PfGW456L13_2958	0.79	+0.5
3,302,426	-				-0.5
3,302,611	-		PfGW456L13_2959	0.41	-0.4
3,302,611	-		PfGW456L13_2959	0.41	-1.0