Experiment: Cytosine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_134 and PfGW456L13_135 overlap by 1 nucleotides PfGW456L13_135 and PfGW456L13_136 are separated by 88 nucleotides
PfGW456L13_134 - Protein containing transglutaminase-like domain, putative cysteine protease, at 149,782 to 150,672
_134
PfGW456L13_135 - Protein containing domains DUF404, DUF407, DUF403, at 150,672 to 153,158
_135
PfGW456L13_136 - Large protein containing transglutaminase-like domain, at 153,247 to 156,519
_136
Position (kb) 150
151
152
153
154 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 149.734 kb on + strand at 149.734 kb on + strand at 150.047 kb on + strand, within PfGW456L13_134 at 150.047 kb on + strand, within PfGW456L13_134 at 150.048 kb on - strand, within PfGW456L13_134 at 150.048 kb on - strand, within PfGW456L13_134 at 150.073 kb on + strand, within PfGW456L13_134 at 150.074 kb on - strand, within PfGW456L13_134 at 150.074 kb on - strand, within PfGW456L13_134 at 150.074 kb on - strand, within PfGW456L13_134 at 150.136 kb on + strand, within PfGW456L13_134 at 150.136 kb on + strand, within PfGW456L13_134 at 150.136 kb on + strand at 150.137 kb on - strand, within PfGW456L13_134 at 150.177 kb on + strand, within PfGW456L13_134 at 150.178 kb on - strand, within PfGW456L13_134 at 150.178 kb on - strand, within PfGW456L13_134 at 150.277 kb on + strand, within PfGW456L13_134 at 150.277 kb on + strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.278 kb on - strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.287 kb on + strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.288 kb on - strand, within PfGW456L13_134 at 150.350 kb on + strand, within PfGW456L13_134 at 150.350 kb on + strand, within PfGW456L13_134 at 150.350 kb on + strand, within PfGW456L13_134 at 150.350 kb on + strand, within PfGW456L13_134 at 150.350 kb on + strand, within PfGW456L13_134 at 150.350 kb on + strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.351 kb on - strand, within PfGW456L13_134 at 150.418 kb on + strand, within PfGW456L13_134 at 150.419 kb on - strand, within PfGW456L13_134 at 150.419 kb on - strand, within PfGW456L13_134 at 150.629 kb on + strand at 150.630 kb on - strand at 150.635 kb on + strand at 150.987 kb on + strand, within PfGW456L13_135 at 150.988 kb on - strand, within PfGW456L13_135 at 150.988 kb on - strand, within PfGW456L13_135 at 151.039 kb on + strand, within PfGW456L13_135 at 151.039 kb on + strand, within PfGW456L13_135 at 151.039 kb on + strand, within PfGW456L13_135 at 151.039 kb on + strand, within PfGW456L13_135 at 151.039 kb on + strand, within PfGW456L13_135 at 151.039 kb on + strand, within PfGW456L13_135 at 151.040 kb on - strand, within PfGW456L13_135 at 151.040 kb on - strand, within PfGW456L13_135 at 151.537 kb on + strand, within PfGW456L13_135 at 151.591 kb on + strand, within PfGW456L13_135 at 151.636 kb on + strand, within PfGW456L13_135 at 151.733 kb on + strand, within PfGW456L13_135 at 151.734 kb on - strand, within PfGW456L13_135 at 151.840 kb on + strand, within PfGW456L13_135 at 151.840 kb on + strand, within PfGW456L13_135 at 151.840 kb on + strand, within PfGW456L13_135 at 151.840 kb on + strand, within PfGW456L13_135 at 151.840 kb on + strand, within PfGW456L13_135 at 151.840 kb on + strand, within PfGW456L13_135 at 151.841 kb on - strand, within PfGW456L13_135 at 151.841 kb on - strand, within PfGW456L13_135 at 151.841 kb on - strand, within PfGW456L13_135 at 151.933 kb on + strand, within PfGW456L13_135 at 151.933 kb on + strand, within PfGW456L13_135 at 151.933 kb on + strand, within PfGW456L13_135 at 151.933 kb on + strand, within PfGW456L13_135 at 151.934 kb on - strand, within PfGW456L13_135 at 151.934 kb on - strand, within PfGW456L13_135 at 151.934 kb on - strand, within PfGW456L13_135 at 151.934 kb on - strand, within PfGW456L13_135 at 151.940 kb on - strand, within PfGW456L13_135 at 152.362 kb on + strand, within PfGW456L13_135 at 152.431 kb on + strand, within PfGW456L13_135 at 152.431 kb on + strand, within PfGW456L13_135 at 152.431 kb on + strand, within PfGW456L13_135 at 152.431 kb on + strand, within PfGW456L13_135 at 152.431 kb on + strand, within PfGW456L13_135 at 152.432 kb on - strand, within PfGW456L13_135 at 152.432 kb on - strand, within PfGW456L13_135 at 152.432 kb on - strand, within PfGW456L13_135 at 152.432 kb on - strand, within PfGW456L13_135 at 152.446 kb on + strand, within PfGW456L13_135 at 152.446 kb on + strand, within PfGW456L13_135 at 152.446 kb on + strand, within PfGW456L13_135 at 152.447 kb on - strand, within PfGW456L13_135 at 152.447 kb on - strand, within PfGW456L13_135 at 152.447 kb on - strand, within PfGW456L13_135 at 152.447 kb on - strand, within PfGW456L13_135 at 152.627 kb on - strand, within PfGW456L13_135 at 152.707 kb on + strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.708 kb on - strand, within PfGW456L13_135 at 152.828 kb on - strand, within PfGW456L13_135 at 152.965 kb on + strand at 152.965 kb on + strand at 152.965 kb on + strand at 152.965 kb on + strand at 152.965 kb on + strand at 152.966 kb on - strand at 152.966 kb on - strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.974 kb on + strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.975 kb on - strand at 152.978 kb on + strand at 152.979 kb on - strand at 153.115 kb on + strand at 153.115 kb on + strand at 153.115 kb on + strand at 153.116 kb on - strand at 153.116 kb on - strand at 153.144 kb on + strand at 153.145 kb on - strand at 153.219 kb on + strand at 153.219 kb on + strand at 153.219 kb on + strand at 153.219 kb on + strand at 153.220 kb on - strand at 153.242 kb on - strand at 153.248 kb on + strand at 153.249 kb on - strand at 153.305 kb on - strand at 153.395 kb on + strand at 153.395 kb on + strand at 153.395 kb on + strand at 153.395 kb on + strand at 153.395 kb on + strand at 153.395 kb on + strand at 153.396 kb on - strand at 153.396 kb on - strand at 153.396 kb on - strand at 153.396 kb on - strand at 153.396 kb on - strand at 153.516 kb on + strand at 153.562 kb on + strand at 153.563 kb on - strand at 153.563 kb on - strand at 153.563 kb on - strand at 153.563 kb on - strand at 153.614 kb on + strand, within PfGW456L13_136 at 153.614 kb on + strand, within PfGW456L13_136 at 153.614 kb on + strand, within PfGW456L13_136 at 153.615 kb on - strand at 153.615 kb on - strand, within PfGW456L13_136 at 153.674 kb on + strand, within PfGW456L13_136 at 153.674 kb on + strand, within PfGW456L13_136 at 153.685 kb on - strand, within PfGW456L13_136 at 153.768 kb on - strand, within PfGW456L13_136 at 154.036 kb on + strand, within PfGW456L13_136 at 154.036 kb on + strand, within PfGW456L13_136 at 154.036 kb on + strand, within PfGW456L13_136 at 154.036 kb on + strand, within PfGW456L13_136 at 154.037 kb on - strand, within PfGW456L13_136 at 154.037 kb on - strand, within PfGW456L13_136 at 154.037 kb on - strand, within PfGW456L13_136 at 154.037 kb on - strand, within PfGW456L13_136 at 154.037 kb on - strand, within PfGW456L13_136 at 154.079 kb on + strand, within PfGW456L13_136 at 154.079 kb on + strand, within PfGW456L13_136 at 154.079 kb on + strand, within PfGW456L13_136 at 154.079 kb on + strand, within PfGW456L13_136 at 154.080 kb on - strand, within PfGW456L13_136 at 154.123 kb on + strand, within PfGW456L13_136 at 154.124 kb on - strand, within PfGW456L13_136
Per-strain Table
Position Strand Gene LocusTag Fraction Cytosine (N) remove 149,734 + -0.5 149,734 + -0.8 150,047 + PfGW456L13_134 0.30 -1.0 150,047 + PfGW456L13_134 0.30 -0.7 150,048 - PfGW456L13_134 0.30 -1.0 150,048 - PfGW456L13_134 0.30 -0.1 150,073 + PfGW456L13_134 0.33 +1.0 150,074 - PfGW456L13_134 0.33 -0.6 150,074 - PfGW456L13_134 0.33 -0.7 150,074 - PfGW456L13_134 0.33 -1.0 150,136 + PfGW456L13_134 0.40 -0.2 150,136 + PfGW456L13_134 0.40 -0.0 150,136 + +3.0 150,137 - PfGW456L13_134 0.40 +0.1 150,177 + PfGW456L13_134 0.44 -1.0 150,178 - PfGW456L13_134 0.44 -0.7 150,178 - PfGW456L13_134 0.44 -1.5 150,277 + PfGW456L13_134 0.56 -0.2 150,277 + PfGW456L13_134 0.56 -1.0 150,278 - PfGW456L13_134 0.56 -1.1 150,278 - PfGW456L13_134 0.56 +0.2 150,278 - PfGW456L13_134 0.56 -0.0 150,278 - PfGW456L13_134 0.56 -0.0 150,278 - PfGW456L13_134 0.56 -1.2 150,278 - PfGW456L13_134 0.56 -0.4 150,278 - PfGW456L13_134 0.56 +0.6 150,287 + PfGW456L13_134 0.57 -1.1 150,287 + PfGW456L13_134 0.57 -2.0 150,287 + PfGW456L13_134 0.57 -2.5 150,287 + PfGW456L13_134 0.57 -1.8 150,287 + PfGW456L13_134 0.57 -0.1 150,287 + PfGW456L13_134 0.57 -0.9 150,287 + PfGW456L13_134 0.57 -0.4 150,287 + PfGW456L13_134 0.57 -0.4 150,287 + PfGW456L13_134 0.57 -2.4 150,287 + PfGW456L13_134 0.57 -0.2 150,288 - PfGW456L13_134 0.57 -1.4 150,288 - PfGW456L13_134 0.57 -1.6 150,288 - PfGW456L13_134 0.57 -0.2 150,288 - PfGW456L13_134 0.57 -3.4 150,288 - PfGW456L13_134 0.57 -1.2 150,288 - PfGW456L13_134 0.57 -1.1 150,288 - PfGW456L13_134 0.57 -0.5 150,288 - PfGW456L13_134 0.57 -0.4 150,288 - PfGW456L13_134 0.57 -0.7 150,288 - PfGW456L13_134 0.57 -0.6 150,350 + PfGW456L13_134 0.64 -0.8 150,350 + PfGW456L13_134 0.64 -0.5 150,350 + PfGW456L13_134 0.64 +0.5 150,350 + PfGW456L13_134 0.64 -2.5 150,350 + PfGW456L13_134 0.64 -1.7 150,350 + PfGW456L13_134 0.64 -0.4 150,351 - PfGW456L13_134 0.64 -0.9 150,351 - PfGW456L13_134 0.64 -0.8 150,351 - PfGW456L13_134 0.64 -1.2 150,351 - PfGW456L13_134 0.64 -1.1 150,351 - PfGW456L13_134 0.64 -0.1 150,351 - PfGW456L13_134 0.64 -0.9 150,351 - PfGW456L13_134 0.64 -0.4 150,418 + PfGW456L13_134 0.71 -1.4 150,419 - PfGW456L13_134 0.71 +0.4 150,419 - PfGW456L13_134 0.71 -1.3 150,629 + -0.5 150,630 - -0.5 150,635 + -0.3 150,987 + PfGW456L13_135 0.13 +1.2 150,988 - PfGW456L13_135 0.13 -0.9 150,988 - PfGW456L13_135 0.13 -1.4 151,039 + PfGW456L13_135 0.15 -0.9 151,039 + PfGW456L13_135 0.15 -1.4 151,039 + PfGW456L13_135 0.15 -2.3 151,039 + PfGW456L13_135 0.15 -1.8 151,039 + PfGW456L13_135 0.15 -0.2 151,039 + PfGW456L13_135 0.15 -0.6 151,040 - PfGW456L13_135 0.15 -1.2 151,040 - PfGW456L13_135 0.15 +0.1 151,537 + PfGW456L13_135 0.35 -1.8 151,591 + PfGW456L13_135 0.37 -0.6 151,636 + PfGW456L13_135 0.39 +0.1 151,733 + PfGW456L13_135 0.43 -1.1 151,734 - PfGW456L13_135 0.43 +0.9 151,840 + PfGW456L13_135 0.47 -0.5 151,840 + PfGW456L13_135 0.47 +0.1 151,840 + PfGW456L13_135 0.47 -1.5 151,840 + PfGW456L13_135 0.47 -0.8 151,840 + PfGW456L13_135 0.47 +0.8 151,840 + PfGW456L13_135 0.47 -1.4 151,841 - PfGW456L13_135 0.47 -1.5 151,841 - PfGW456L13_135 0.47 -0.7 151,841 - PfGW456L13_135 0.47 +0.5 151,933 + PfGW456L13_135 0.51 +0.8 151,933 + PfGW456L13_135 0.51 -1.3 151,933 + PfGW456L13_135 0.51 +0.3 151,933 + PfGW456L13_135 0.51 -0.2 151,934 - PfGW456L13_135 0.51 -1.0 151,934 - PfGW456L13_135 0.51 -0.5 151,934 - PfGW456L13_135 0.51 +1.6 151,934 - PfGW456L13_135 0.51 -1.4 151,940 - PfGW456L13_135 0.51 +0.5 152,362 + PfGW456L13_135 0.68 -1.1 152,431 + PfGW456L13_135 0.71 -0.2 152,431 + PfGW456L13_135 0.71 -0.2 152,431 + PfGW456L13_135 0.71 -0.8 152,431 + PfGW456L13_135 0.71 -1.0 152,431 + PfGW456L13_135 0.71 +0.0 152,432 - PfGW456L13_135 0.71 -0.6 152,432 - PfGW456L13_135 0.71 +0.3 152,432 - PfGW456L13_135 0.71 -1.9 152,432 - PfGW456L13_135 0.71 -0.4 152,446 + PfGW456L13_135 0.71 -0.3 152,446 + PfGW456L13_135 0.71 -0.9 152,446 + PfGW456L13_135 0.71 -0.8 152,447 - PfGW456L13_135 0.71 -0.6 152,447 - PfGW456L13_135 0.71 +0.4 152,447 - PfGW456L13_135 0.71 -0.8 152,447 - PfGW456L13_135 0.71 -1.5 152,627 - PfGW456L13_135 0.79 -1.2 152,707 + PfGW456L13_135 0.82 -0.9 152,708 - PfGW456L13_135 0.82 -1.4 152,708 - PfGW456L13_135 0.82 +0.4 152,708 - PfGW456L13_135 0.82 -0.9 152,708 - PfGW456L13_135 0.82 -0.8 152,708 - PfGW456L13_135 0.82 -0.5 152,708 - PfGW456L13_135 0.82 -1.1 152,708 - PfGW456L13_135 0.82 -0.4 152,828 - PfGW456L13_135 0.87 -1.9 152,965 + -1.3 152,965 + -0.4 152,965 + -0.8 152,965 + -1.9 152,965 + -0.0 152,966 - -1.1 152,966 - -0.9 152,974 + -0.4 152,974 + -1.2 152,974 + -1.9 152,974 + -1.4 152,974 + +0.1 152,974 + -1.5 152,974 + -0.4 152,974 + -0.7 152,974 + -0.4 152,974 + -0.6 152,974 + -0.6 152,974 + -1.2 152,974 + +0.8 152,974 + -1.9 152,975 - -1.0 152,975 - -0.6 152,975 - -1.0 152,975 - -0.3 152,975 - +0.0 152,975 - +0.2 152,975 - -0.4 152,975 - -0.5 152,975 - +0.2 152,975 - -0.9 152,975 - -1.9 152,975 - -0.9 152,975 - -0.2 152,975 - -1.8 152,975 - -2.2 152,978 + -0.5 152,979 - -1.4 153,115 + +0.3 153,115 + -0.6 153,115 + -0.6 153,116 - +0.0 153,116 - +0.4 153,144 + -0.1 153,145 - -0.3 153,219 + +0.5 153,219 + -0.6 153,219 + -0.9 153,219 + -0.2 153,220 - -0.1 153,242 - -0.7 153,248 + +1.6 153,249 - +0.2 153,305 - +0.6 153,395 + +1.1 153,395 + -1.1 153,395 + +0.8 153,395 + +0.7 153,395 + +0.0 153,395 + +0.5 153,396 - +0.2 153,396 - +0.2 153,396 - -0.1 153,396 - -0.1 153,396 - -0.4 153,516 + -0.9 153,562 + +0.8 153,563 - +0.1 153,563 - +0.5 153,563 - +0.8 153,563 - +0.0 153,614 + PfGW456L13_136 0.11 -1.8 153,614 + PfGW456L13_136 0.11 +0.3 153,614 + PfGW456L13_136 0.11 +0.8 153,615 - -0.4 153,615 - PfGW456L13_136 0.11 -0.4 153,674 + PfGW456L13_136 0.13 -1.5 153,674 + PfGW456L13_136 0.13 +0.4 153,685 - PfGW456L13_136 0.13 -0.5 153,768 - PfGW456L13_136 0.16 +0.1 154,036 + PfGW456L13_136 0.24 +0.1 154,036 + PfGW456L13_136 0.24 -0.4 154,036 + PfGW456L13_136 0.24 +1.4 154,036 + PfGW456L13_136 0.24 +0.6 154,037 - PfGW456L13_136 0.24 +0.4 154,037 - PfGW456L13_136 0.24 +0.0 154,037 - PfGW456L13_136 0.24 -0.3 154,037 - PfGW456L13_136 0.24 -0.6 154,037 - PfGW456L13_136 0.24 -0.8 154,079 + PfGW456L13_136 0.25 +0.5 154,079 + PfGW456L13_136 0.25 +0.1 154,079 + PfGW456L13_136 0.25 +0.8 154,079 + PfGW456L13_136 0.25 +0.3 154,080 - PfGW456L13_136 0.25 +0.9 154,123 + PfGW456L13_136 0.27 +0.4 154,124 - PfGW456L13_136 0.27 +0.5
Or see this region's nucleotide sequence