Experiment: Orotic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0519 and Atu0520 overlap by 1 nucleotides Atu0520 and Atu0521 overlap by 4 nucleotides Atu0521 and Atu0522 are separated by 14 nucleotides Atu0522 and Atu0523 are separated by 108 nucleotides
Atu0519: Atu0519 - protein-glutamate methylesterase, at 509,606 to 510,661
Atu0519
Atu0520: Atu0520 - chemotaxis receiver protein, at 510,661 to 511,050
Atu0520
Atu0521: Atu0521 - methyl-accepting chemotaxis protein, at 511,047 to 511,592
Atu0521
Atu0522: Atu0522 - hypothetical protein, at 511,607 to 511,990
Atu0522
Atu0523: Atu0523 - flagellar M-ring protein, at 512,099 to 513,799
Atu0523
Position (kb) 511
512 Strain fitness (log2 ratio) -2
-1
0
1
2 at 510.693 kb on - strand at 510.731 kb on - strand, within Atu0520 at 510.767 kb on - strand, within Atu0520 at 510.767 kb on - strand, within Atu0520 at 510.865 kb on - strand, within Atu0520 at 510.930 kb on + strand, within Atu0520 at 510.936 kb on + strand, within Atu0520 at 510.938 kb on - strand, within Atu0520 at 511.091 kb on + strand at 511.091 kb on + strand at 511.099 kb on - strand at 511.099 kb on - strand at 511.164 kb on - strand, within Atu0521 at 511.166 kb on + strand, within Atu0521 at 511.198 kb on - strand, within Atu0521 at 511.203 kb on - strand, within Atu0521 at 511.205 kb on + strand, within Atu0521 at 511.241 kb on + strand, within Atu0521 at 511.241 kb on + strand, within Atu0521 at 511.282 kb on + strand, within Atu0521 at 511.365 kb on + strand, within Atu0521 at 511.443 kb on + strand, within Atu0521 at 511.445 kb on - strand, within Atu0521 at 511.473 kb on + strand, within Atu0521 at 511.507 kb on - strand, within Atu0521 at 511.516 kb on + strand, within Atu0521 at 511.564 kb on - strand at 511.564 kb on - strand at 511.637 kb on - strand at 511.637 kb on - strand at 511.736 kb on - strand, within Atu0522 at 511.743 kb on + strand, within Atu0522 at 511.788 kb on + strand, within Atu0522 at 511.789 kb on - strand, within Atu0522 at 511.790 kb on - strand, within Atu0522 at 511.806 kb on + strand, within Atu0522 at 511.850 kb on + strand, within Atu0522 at 511.860 kb on + strand, within Atu0522 at 511.871 kb on - strand, within Atu0522 at 511.891 kb on + strand, within Atu0522 at 511.992 kb on - strand at 511.995 kb on + strand at 512.010 kb on + strand at 512.057 kb on + strand at 512.075 kb on + strand at 512.091 kb on - strand at 512.091 kb on - strand at 512.099 kb on - strand at 512.144 kb on + strand at 512.162 kb on + strand at 512.209 kb on + strand at 512.267 kb on + strand at 512.362 kb on - strand, within Atu0523 at 512.450 kb on - strand, within Atu0523 at 512.469 kb on + strand, within Atu0523 at 512.590 kb on - strand, within Atu0523 at 512.636 kb on + strand, within Atu0523 at 512.708 kb on - strand, within Atu0523 at 512.785 kb on - strand, within Atu0523 at 512.911 kb on + strand, within Atu0523 at 512.911 kb on + strand, within Atu0523 at 512.919 kb on - strand, within Atu0523 at 512.919 kb on - strand, within Atu0523 at 512.933 kb on + strand, within Atu0523 at 512.941 kb on - strand, within Atu0523 at 512.941 kb on - strand, within Atu0523 at 512.941 kb on - strand, within Atu0523
Per-strain Table
Position Strand Gene LocusTag Fraction Orotic (N) remove 510,693 - +0.1 510,731 - Atu0520 0.18 -0.1 510,767 - Atu0520 0.27 -0.6 510,767 - Atu0520 0.27 +0.1 510,865 - Atu0520 0.52 +1.0 510,930 + Atu0520 0.69 -0.6 510,936 + Atu0520 0.71 +0.4 510,938 - Atu0520 0.71 +0.1 511,091 + +0.1 511,091 + -0.3 511,099 - +0.5 511,099 - -1.0 511,164 - Atu0521 0.21 -1.5 511,166 + Atu0521 0.22 +0.2 511,198 - Atu0521 0.28 +0.5 511,203 - Atu0521 0.29 +0.0 511,205 + Atu0521 0.29 -0.6 511,241 + Atu0521 0.36 -0.3 511,241 + Atu0521 0.36 -0.4 511,282 + Atu0521 0.43 +0.3 511,365 + Atu0521 0.58 -0.1 511,443 + Atu0521 0.73 +0.9 511,445 - Atu0521 0.73 +0.7 511,473 + Atu0521 0.78 +0.7 511,507 - Atu0521 0.84 +0.7 511,516 + Atu0521 0.86 -0.4 511,564 - -0.1 511,564 - +0.7 511,637 - -0.4 511,637 - +0.2 511,736 - Atu0522 0.34 +0.3 511,743 + Atu0522 0.35 +0.1 511,788 + Atu0522 0.47 +0.2 511,789 - Atu0522 0.47 -0.3 511,790 - Atu0522 0.48 -1.9 511,806 + Atu0522 0.52 -0.5 511,850 + Atu0522 0.63 +0.2 511,860 + Atu0522 0.66 +0.1 511,871 - Atu0522 0.69 -2.0 511,891 + Atu0522 0.74 -0.5 511,992 - -0.5 511,995 + -1.3 512,010 + +2.0 512,057 + +0.5 512,075 + -0.8 512,091 - +1.0 512,091 - +0.2 512,099 - +0.4 512,144 + -0.4 512,162 + +0.2 512,209 + -0.0 512,267 + +0.3 512,362 - Atu0523 0.15 +0.0 512,450 - Atu0523 0.21 +1.4 512,469 + Atu0523 0.22 -2.6 512,590 - Atu0523 0.29 +0.2 512,636 + Atu0523 0.32 +0.3 512,708 - Atu0523 0.36 +0.4 512,785 - Atu0523 0.40 +1.2 512,911 + Atu0523 0.48 +0.2 512,911 + Atu0523 0.48 +0.3 512,919 - Atu0523 0.48 -0.4 512,919 - Atu0523 0.48 +0.7 512,933 + Atu0523 0.49 -0.2 512,941 - Atu0523 0.50 -0.1 512,941 - Atu0523 0.50 +0.9 512,941 - Atu0523 0.50 +0.2
Or see this region's nucleotide sequence