Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1834

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1833 and B158DRAFT_1834 are separated by 220 nucleotidesB158DRAFT_1834 and B158DRAFT_1835 overlap by 1 nucleotides B158DRAFT_1833: B158DRAFT_1833 - Uncharacterized flavoproteins, at 1,931,510 to 1,932,322 _1833 B158DRAFT_1834: B158DRAFT_1834 - SOS-response transcriptional repressors (RecA-mediated autopeptidases), at 1,932,543 to 1,932,965 _1834 B158DRAFT_1835: B158DRAFT_1835 - Nucleotidyltransferase/DNA polymerase involved in DNA repair, at 1,932,965 to 1,934,233 _1835 Position (kb) 1932 1933Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 1931.558 kb on + strandat 1931.564 kb on + strandat 1931.605 kb on + strand, within B158DRAFT_1833at 1931.605 kb on + strand, within B158DRAFT_1833at 1931.610 kb on + strand, within B158DRAFT_1833at 1931.723 kb on - strand, within B158DRAFT_1833at 1931.723 kb on - strand, within B158DRAFT_1833at 1931.723 kb on - strand, within B158DRAFT_1833at 1931.733 kb on - strand, within B158DRAFT_1833at 1931.772 kb on + strand, within B158DRAFT_1833at 1931.772 kb on + strand, within B158DRAFT_1833at 1931.807 kb on + strand, within B158DRAFT_1833at 1931.822 kb on - strand, within B158DRAFT_1833at 1931.822 kb on - strand, within B158DRAFT_1833at 1931.822 kb on - strand, within B158DRAFT_1833at 1931.879 kb on + strand, within B158DRAFT_1833at 1931.887 kb on - strand, within B158DRAFT_1833at 1931.919 kb on - strand, within B158DRAFT_1833at 1931.922 kb on - strand, within B158DRAFT_1833at 1931.927 kb on - strand, within B158DRAFT_1833at 1931.932 kb on - strand, within B158DRAFT_1833at 1932.007 kb on - strand, within B158DRAFT_1833at 1932.007 kb on - strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.022 kb on + strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.030 kb on - strand, within B158DRAFT_1833at 1932.150 kb on + strand, within B158DRAFT_1833at 1932.162 kb on + strand, within B158DRAFT_1833at 1932.192 kb on - strand, within B158DRAFT_1833at 1932.198 kb on + strand, within B158DRAFT_1833at 1932.238 kb on - strand, within B158DRAFT_1833at 1932.249 kb on + strandat 1932.281 kb on - strandat 1932.324 kb on + strandat 1932.367 kb on - strandat 1932.461 kb on + strandat 1932.591 kb on + strand, within B158DRAFT_1834at 1932.591 kb on + strand, within B158DRAFT_1834at 1932.591 kb on + strand, within B158DRAFT_1834at 1932.591 kb on + strand, within B158DRAFT_1834at 1932.599 kb on - strand, within B158DRAFT_1834at 1932.599 kb on - strand, within B158DRAFT_1834at 1932.599 kb on - strand, within B158DRAFT_1834at 1932.639 kb on - strand, within B158DRAFT_1834at 1932.651 kb on + strand, within B158DRAFT_1834at 1932.669 kb on - strand, within B158DRAFT_1834at 1932.890 kb on - strand, within B158DRAFT_1834at 1932.893 kb on + strand, within B158DRAFT_1834at 1932.904 kb on - strand, within B158DRAFT_1834at 1932.928 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.984 kb on + strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1932.992 kb on - strandat 1933.002 kb on - strandat 1933.016 kb on - strandat 1933.016 kb on - strandat 1933.092 kb on + strand, within B158DRAFT_1835at 1933.127 kb on + strand, within B158DRAFT_1835at 1933.182 kb on - strand, within B158DRAFT_1835at 1933.200 kb on + strand, within B158DRAFT_1835at 1933.208 kb on - strand, within B158DRAFT_1835at 1933.268 kb on + strand, within B158DRAFT_1835at 1933.320 kb on + strand, within B158DRAFT_1835at 1933.320 kb on + strand, within B158DRAFT_1835at 1933.320 kb on + strand, within B158DRAFT_1835at 1933.330 kb on - strand, within B158DRAFT_1835at 1933.347 kb on - strand, within B158DRAFT_1835at 1933.355 kb on - strand, within B158DRAFT_1835at 1933.360 kb on - strand, within B158DRAFT_1835at 1933.363 kb on - strand, within B158DRAFT_1835at 1933.389 kb on + strand, within B158DRAFT_1835at 1933.389 kb on + strand, within B158DRAFT_1835at 1933.389 kb on + strand, within B158DRAFT_1835at 1933.397 kb on - strand, within B158DRAFT_1835at 1933.397 kb on - strand, within B158DRAFT_1835at 1933.397 kb on - strand, within B158DRAFT_1835at 1933.407 kb on - strand, within B158DRAFT_1835at 1933.411 kb on + strand, within B158DRAFT_1835at 1933.411 kb on + strand, within B158DRAFT_1835at 1933.411 kb on + strand, within B158DRAFT_1835at 1933.419 kb on - strand, within B158DRAFT_1835at 1933.419 kb on - strand, within B158DRAFT_1835at 1933.463 kb on + strand, within B158DRAFT_1835at 1933.463 kb on + strand, within B158DRAFT_1835at 1933.471 kb on - strand, within B158DRAFT_1835at 1933.583 kb on + strand, within B158DRAFT_1835at 1933.591 kb on - strand, within B158DRAFT_1835at 1933.591 kb on - strand, within B158DRAFT_1835at 1933.591 kb on - strand, within B158DRAFT_1835at 1933.591 kb on - strand, within B158DRAFT_1835at 1933.606 kb on + strand, within B158DRAFT_1835at 1933.650 kb on + strand, within B158DRAFT_1835at 1933.653 kb on + strand, within B158DRAFT_1835at 1933.668 kb on - strand, within B158DRAFT_1835at 1933.672 kb on + strand, within B158DRAFT_1835at 1933.750 kb on - strand, within B158DRAFT_1835at 1933.752 kb on - strand, within B158DRAFT_1835at 1933.797 kb on + strand, within B158DRAFT_1835at 1933.800 kb on + strand, within B158DRAFT_1835at 1933.800 kb on + strand, within B158DRAFT_1835at 1933.808 kb on - strand, within B158DRAFT_1835at 1933.834 kb on + strand, within B158DRAFT_1835at 1933.842 kb on + strand, within B158DRAFT_1835at 1933.873 kb on + strand, within B158DRAFT_1835at 1933.893 kb on + strand, within B158DRAFT_1835at 1933.893 kb on + strand, within B158DRAFT_1835at 1933.901 kb on - strand, within B158DRAFT_1835at 1933.901 kb on - strand, within B158DRAFT_1835at 1933.901 kb on - strand, within B158DRAFT_1835at 1933.901 kb on - strand, within B158DRAFT_1835at 1933.947 kb on + strand, within B158DRAFT_1835at 1933.955 kb on - strand, within B158DRAFT_1835at 1933.955 kb on - strand, within B158DRAFT_1835at 1933.957 kb on - strand, within B158DRAFT_1835

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,931,558 + -0.7
1,931,564 + -0.1
1,931,605 + B158DRAFT_1833 0.12 -2.2
1,931,605 + B158DRAFT_1833 0.12 -0.1
1,931,610 + B158DRAFT_1833 0.12 -4.0
1,931,723 - B158DRAFT_1833 0.26 -1.3
1,931,723 - B158DRAFT_1833 0.26 -0.9
1,931,723 - B158DRAFT_1833 0.26 -1.7
1,931,733 - B158DRAFT_1833 0.27 -0.1
1,931,772 + B158DRAFT_1833 0.32 -0.4
1,931,772 + B158DRAFT_1833 0.32 +1.4
1,931,807 + B158DRAFT_1833 0.37 -0.5
1,931,822 - B158DRAFT_1833 0.38 +0.1
1,931,822 - B158DRAFT_1833 0.38 -0.9
1,931,822 - B158DRAFT_1833 0.38 -0.8
1,931,879 + B158DRAFT_1833 0.45 -0.7
1,931,887 - B158DRAFT_1833 0.46 -0.3
1,931,919 - B158DRAFT_1833 0.50 -1.2
1,931,922 - B158DRAFT_1833 0.51 -0.9
1,931,927 - B158DRAFT_1833 0.51 -1.0
1,931,932 - B158DRAFT_1833 0.52 -3.6
1,932,007 - B158DRAFT_1833 0.61 -0.4
1,932,007 - B158DRAFT_1833 0.61 -1.2
1,932,022 + B158DRAFT_1833 0.63 -0.9
1,932,022 + B158DRAFT_1833 0.63 -0.6
1,932,022 + B158DRAFT_1833 0.63 -0.0
1,932,022 + B158DRAFT_1833 0.63 -0.8
1,932,022 + B158DRAFT_1833 0.63 -1.0
1,932,022 + B158DRAFT_1833 0.63 -1.1
1,932,022 + B158DRAFT_1833 0.63 -0.6
1,932,022 + B158DRAFT_1833 0.63 -0.4
1,932,022 + B158DRAFT_1833 0.63 -0.8
1,932,022 + B158DRAFT_1833 0.63 +0.1
1,932,022 + B158DRAFT_1833 0.63 -2.4
1,932,022 + B158DRAFT_1833 0.63 -1.0
1,932,022 + B158DRAFT_1833 0.63 -1.8
1,932,030 - B158DRAFT_1833 0.64 -1.5
1,932,030 - B158DRAFT_1833 0.64 -0.7
1,932,030 - B158DRAFT_1833 0.64 -0.5
1,932,030 - B158DRAFT_1833 0.64 -1.4
1,932,030 - B158DRAFT_1833 0.64 -0.6
1,932,030 - B158DRAFT_1833 0.64 -1.3
1,932,030 - B158DRAFT_1833 0.64 -0.2
1,932,030 - B158DRAFT_1833 0.64 -1.4
1,932,150 + B158DRAFT_1833 0.79 +0.4
1,932,162 + B158DRAFT_1833 0.80 -1.2
1,932,192 - B158DRAFT_1833 0.84 -1.6
1,932,198 + B158DRAFT_1833 0.85 -0.4
1,932,238 - B158DRAFT_1833 0.90 -3.1
1,932,249 + -0.8
1,932,281 - -1.6
1,932,324 + +2.0
1,932,367 - -1.5
1,932,461 + +0.4
1,932,591 + B158DRAFT_1834 0.11 -2.9
1,932,591 + B158DRAFT_1834 0.11 +1.0
1,932,591 + B158DRAFT_1834 0.11 -1.4
1,932,591 + B158DRAFT_1834 0.11 -0.1
1,932,599 - B158DRAFT_1834 0.13 -0.8
1,932,599 - B158DRAFT_1834 0.13 -1.4
1,932,599 - B158DRAFT_1834 0.13 +0.2
1,932,639 - B158DRAFT_1834 0.23 -0.8
1,932,651 + B158DRAFT_1834 0.26 -1.4
1,932,669 - B158DRAFT_1834 0.30 +0.3
1,932,890 - B158DRAFT_1834 0.82 +0.6
1,932,893 + B158DRAFT_1834 0.83 -0.3
1,932,904 - B158DRAFT_1834 0.85 +1.0
1,932,928 + +0.0
1,932,984 + -0.3
1,932,984 + +0.1
1,932,984 + +0.1
1,932,984 + +1.3
1,932,984 + -1.3
1,932,992 - -0.9
1,932,992 - +0.1
1,932,992 - -0.0
1,932,992 - -1.4
1,932,992 - -2.7
1,933,002 - -0.9
1,933,016 - -0.3
1,933,016 - -3.7
1,933,092 + B158DRAFT_1835 0.10 -0.4
1,933,127 + B158DRAFT_1835 0.13 -0.8
1,933,182 - B158DRAFT_1835 0.17 +0.3
1,933,200 + B158DRAFT_1835 0.19 -1.9
1,933,208 - B158DRAFT_1835 0.19 -2.3
1,933,268 + B158DRAFT_1835 0.24 -0.1
1,933,320 + B158DRAFT_1835 0.28 -0.0
1,933,320 + B158DRAFT_1835 0.28 -0.7
1,933,320 + B158DRAFT_1835 0.28 -1.9
1,933,330 - B158DRAFT_1835 0.29 -0.3
1,933,347 - B158DRAFT_1835 0.30 -0.6
1,933,355 - B158DRAFT_1835 0.31 +1.6
1,933,360 - B158DRAFT_1835 0.31 +1.1
1,933,363 - B158DRAFT_1835 0.31 -2.7
1,933,389 + B158DRAFT_1835 0.33 +0.5
1,933,389 + B158DRAFT_1835 0.33 -0.1
1,933,389 + B158DRAFT_1835 0.33 -1.5
1,933,397 - B158DRAFT_1835 0.34 -0.3
1,933,397 - B158DRAFT_1835 0.34 -0.1
1,933,397 - B158DRAFT_1835 0.34 -0.3
1,933,407 - B158DRAFT_1835 0.35 -0.7
1,933,411 + B158DRAFT_1835 0.35 +0.8
1,933,411 + B158DRAFT_1835 0.35 -0.2
1,933,411 + B158DRAFT_1835 0.35 -1.5
1,933,419 - B158DRAFT_1835 0.36 +0.2
1,933,419 - B158DRAFT_1835 0.36 -0.6
1,933,463 + B158DRAFT_1835 0.39 -0.3
1,933,463 + B158DRAFT_1835 0.39 -0.5
1,933,471 - B158DRAFT_1835 0.40 -1.2
1,933,583 + B158DRAFT_1835 0.49 -0.4
1,933,591 - B158DRAFT_1835 0.49 +0.9
1,933,591 - B158DRAFT_1835 0.49 +0.8
1,933,591 - B158DRAFT_1835 0.49 -1.4
1,933,591 - B158DRAFT_1835 0.49 -1.1
1,933,606 + B158DRAFT_1835 0.51 +1.2
1,933,650 + B158DRAFT_1835 0.54 -0.2
1,933,653 + B158DRAFT_1835 0.54 -1.3
1,933,668 - B158DRAFT_1835 0.55 -0.1
1,933,672 + B158DRAFT_1835 0.56 -0.0
1,933,750 - B158DRAFT_1835 0.62 +0.4
1,933,752 - B158DRAFT_1835 0.62 +0.9
1,933,797 + B158DRAFT_1835 0.66 -0.6
1,933,800 + B158DRAFT_1835 0.66 -0.1
1,933,800 + B158DRAFT_1835 0.66 -0.8
1,933,808 - B158DRAFT_1835 0.66 -0.4
1,933,834 + B158DRAFT_1835 0.68 -1.3
1,933,842 + B158DRAFT_1835 0.69 -0.7
1,933,873 + B158DRAFT_1835 0.72 -0.3
1,933,893 + B158DRAFT_1835 0.73 -0.2
1,933,893 + B158DRAFT_1835 0.73 -0.6
1,933,901 - B158DRAFT_1835 0.74 -0.1
1,933,901 - B158DRAFT_1835 0.74 -2.3
1,933,901 - B158DRAFT_1835 0.74 -0.6
1,933,901 - B158DRAFT_1835 0.74 -1.3
1,933,947 + B158DRAFT_1835 0.77 +1.0
1,933,955 - B158DRAFT_1835 0.78 +1.9
1,933,955 - B158DRAFT_1835 0.78 -2.3
1,933,957 - B158DRAFT_1835 0.78 -2.5

Or see this region's nucleotide sequence