Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1782

Experiment: motility

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1781 and B158DRAFT_1782 are separated by 295 nucleotidesB158DRAFT_1782 and B158DRAFT_1783 are separated by 47 nucleotidesB158DRAFT_1783 and B158DRAFT_1784 overlap by 23 nucleotides B158DRAFT_1781: B158DRAFT_1781 - Acyl-CoA dehydrogenases, at 1,873,889 to 1,876,309 _1781 B158DRAFT_1782: B158DRAFT_1782 - amidohydrolase, at 1,876,605 to 1,877,906 _1782 B158DRAFT_1783: B158DRAFT_1783 - Choline/ethanolamine kinase., at 1,877,954 to 1,878,790 _1783 B158DRAFT_1784: B158DRAFT_1784 - nicotinamide mononucleotide transporter PnuC, at 1,878,768 to 1,879,379 _1784 Position (kb) 1876 1877 1878Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 1875.654 kb on + strand, within B158DRAFT_1781at 1875.662 kb on - strand, within B158DRAFT_1781at 1875.770 kb on - strand, within B158DRAFT_1781at 1875.787 kb on + strand, within B158DRAFT_1781at 1875.788 kb on + strand, within B158DRAFT_1781at 1875.788 kb on + strand, within B158DRAFT_1781at 1875.795 kb on - strand, within B158DRAFT_1781at 1875.803 kb on + strand, within B158DRAFT_1781at 1875.806 kb on - strand, within B158DRAFT_1781at 1875.911 kb on + strand, within B158DRAFT_1781at 1875.911 kb on + strand, within B158DRAFT_1781at 1875.911 kb on + strand, within B158DRAFT_1781at 1875.911 kb on + strand, within B158DRAFT_1781at 1875.918 kb on + strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.919 kb on - strand, within B158DRAFT_1781at 1875.926 kb on - strand, within B158DRAFT_1781at 1875.926 kb on - strand, within B158DRAFT_1781at 1875.926 kb on - strand, within B158DRAFT_1781at 1875.926 kb on - strand, within B158DRAFT_1781at 1875.937 kb on + strand, within B158DRAFT_1781at 1875.945 kb on - strand, within B158DRAFT_1781at 1875.945 kb on - strand, within B158DRAFT_1781at 1876.019 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.036 kb on + strand, within B158DRAFT_1781at 1876.042 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.044 kb on - strand, within B158DRAFT_1781at 1876.104 kb on - strandat 1876.126 kb on + strandat 1876.141 kb on - strandat 1876.313 kb on + strandat 1876.349 kb on - strandat 1876.394 kb on + strandat 1876.399 kb on + strandat 1876.402 kb on - strandat 1876.402 kb on - strandat 1876.402 kb on - strandat 1876.438 kb on + strandat 1876.457 kb on + strandat 1876.466 kb on - strandat 1876.468 kb on - strandat 1876.494 kb on - strandat 1876.500 kb on + strandat 1876.500 kb on + strandat 1876.503 kb on - strandat 1876.506 kb on - strandat 1876.511 kb on - strandat 1876.511 kb on - strandat 1876.513 kb on - strandat 1876.571 kb on - strandat 1876.696 kb on - strandat 1876.723 kb on + strandat 1876.741 kb on + strand, within B158DRAFT_1782at 1876.853 kb on + strand, within B158DRAFT_1782at 1876.853 kb on + strand, within B158DRAFT_1782at 1876.860 kb on + strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.861 kb on - strand, within B158DRAFT_1782at 1876.876 kb on - strand, within B158DRAFT_1782at 1876.904 kb on - strand, within B158DRAFT_1782at 1876.923 kb on + strand, within B158DRAFT_1782at 1876.943 kb on - strand, within B158DRAFT_1782at 1876.993 kb on + strand, within B158DRAFT_1782at 1877.009 kb on - strand, within B158DRAFT_1782at 1877.105 kb on - strand, within B158DRAFT_1782at 1877.115 kb on - strand, within B158DRAFT_1782at 1877.139 kb on - strand, within B158DRAFT_1782at 1877.167 kb on + strand, within B158DRAFT_1782at 1877.175 kb on - strand, within B158DRAFT_1782at 1877.206 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.217 kb on - strand, within B158DRAFT_1782at 1877.220 kb on + strand, within B158DRAFT_1782at 1877.245 kb on + strand, within B158DRAFT_1782at 1877.245 kb on - strand, within B158DRAFT_1782at 1877.252 kb on + strand, within B158DRAFT_1782at 1877.257 kb on + strand, within B158DRAFT_1782at 1877.292 kb on + strand, within B158DRAFT_1782at 1877.300 kb on - strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.302 kb on + strand, within B158DRAFT_1782at 1877.308 kb on - strand, within B158DRAFT_1782at 1877.310 kb on - strand, within B158DRAFT_1782at 1877.310 kb on - strand, within B158DRAFT_1782at 1877.310 kb on - strand, within B158DRAFT_1782at 1877.331 kb on + strand, within B158DRAFT_1782at 1877.339 kb on - strand, within B158DRAFT_1782at 1877.404 kb on + strand, within B158DRAFT_1782at 1877.411 kb on + strand, within B158DRAFT_1782at 1877.411 kb on + strand, within B158DRAFT_1782at 1877.558 kb on + strand, within B158DRAFT_1782at 1877.558 kb on + strand, within B158DRAFT_1782at 1877.558 kb on + strand, within B158DRAFT_1782at 1877.588 kb on + strand, within B158DRAFT_1782at 1877.645 kb on - strand, within B158DRAFT_1782at 1877.853 kb on + strandat 1877.978 kb on - strandat 1877.982 kb on + strandat 1878.056 kb on - strand, within B158DRAFT_1783at 1878.065 kb on - strand, within B158DRAFT_1783at 1878.234 kb on - strand, within B158DRAFT_1783at 1878.286 kb on - strand, within B158DRAFT_1783at 1878.389 kb on - strand, within B158DRAFT_1783at 1878.395 kb on + strand, within B158DRAFT_1783at 1878.454 kb on - strand, within B158DRAFT_1783at 1878.530 kb on + strand, within B158DRAFT_1783at 1878.551 kb on + strand, within B158DRAFT_1783at 1878.551 kb on + strand, within B158DRAFT_1783at 1878.559 kb on - strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.576 kb on + strand, within B158DRAFT_1783at 1878.584 kb on - strand, within B158DRAFT_1783at 1878.606 kb on - strand, within B158DRAFT_1783at 1878.608 kb on + strand, within B158DRAFT_1783at 1878.645 kb on + strand, within B158DRAFT_1783at 1878.645 kb on + strand, within B158DRAFT_1783at 1878.655 kb on + strand, within B158DRAFT_1783at 1878.663 kb on - strand, within B158DRAFT_1783at 1878.679 kb on + strand, within B158DRAFT_1783at 1878.687 kb on - strand, within B158DRAFT_1783at 1878.775 kb on + strandat 1878.775 kb on + strandat 1878.783 kb on - strandat 1878.787 kb on + strandat 1878.790 kb on - strandat 1878.795 kb on - strandat 1878.795 kb on - strandat 1878.803 kb on + strandat 1878.822 kb on + strandat 1878.830 kb on - strand, within B158DRAFT_1784at 1878.830 kb on - strand, within B158DRAFT_1784

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction motility
remove
1,875,654 + B158DRAFT_1781 0.73 -0.3
1,875,662 - B158DRAFT_1781 0.73 -0.3
1,875,770 - B158DRAFT_1781 0.78 -0.8
1,875,787 + B158DRAFT_1781 0.78 +1.0
1,875,788 + B158DRAFT_1781 0.78 -0.6
1,875,788 + B158DRAFT_1781 0.78 +0.5
1,875,795 - B158DRAFT_1781 0.79 +0.8
1,875,803 + B158DRAFT_1781 0.79 +0.9
1,875,806 - B158DRAFT_1781 0.79 -1.0
1,875,911 + B158DRAFT_1781 0.84 -0.9
1,875,911 + B158DRAFT_1781 0.84 -0.8
1,875,911 + B158DRAFT_1781 0.84 -0.1
1,875,911 + B158DRAFT_1781 0.84 -0.5
1,875,918 + B158DRAFT_1781 0.84 +1.2
1,875,919 - B158DRAFT_1781 0.84 -2.0
1,875,919 - B158DRAFT_1781 0.84 -2.6
1,875,919 - B158DRAFT_1781 0.84 +0.5
1,875,919 - B158DRAFT_1781 0.84 +0.5
1,875,919 - B158DRAFT_1781 0.84 +0.4
1,875,919 - B158DRAFT_1781 0.84 +1.4
1,875,919 - B158DRAFT_1781 0.84 -0.7
1,875,926 - B158DRAFT_1781 0.84 +0.2
1,875,926 - B158DRAFT_1781 0.84 -1.0
1,875,926 - B158DRAFT_1781 0.84 -2.0
1,875,926 - B158DRAFT_1781 0.84 -0.3
1,875,937 + B158DRAFT_1781 0.85 -0.4
1,875,945 - B158DRAFT_1781 0.85 -1.8
1,875,945 - B158DRAFT_1781 0.85 -1.7
1,876,019 + B158DRAFT_1781 0.88 -2.4
1,876,036 + B158DRAFT_1781 0.89 +0.9
1,876,036 + B158DRAFT_1781 0.89 -1.1
1,876,036 + B158DRAFT_1781 0.89 -1.1
1,876,036 + B158DRAFT_1781 0.89 -0.6
1,876,036 + B158DRAFT_1781 0.89 -3.5
1,876,036 + B158DRAFT_1781 0.89 +1.4
1,876,036 + B158DRAFT_1781 0.89 +2.4
1,876,036 + B158DRAFT_1781 0.89 -0.2
1,876,036 + B158DRAFT_1781 0.89 -0.4
1,876,036 + B158DRAFT_1781 0.89 -1.8
1,876,042 - B158DRAFT_1781 0.89 -1.2
1,876,044 - B158DRAFT_1781 0.89 -2.9
1,876,044 - B158DRAFT_1781 0.89 -3.4
1,876,044 - B158DRAFT_1781 0.89 -0.2
1,876,044 - B158DRAFT_1781 0.89 -0.6
1,876,044 - B158DRAFT_1781 0.89 -0.5
1,876,044 - B158DRAFT_1781 0.89 -0.4
1,876,044 - B158DRAFT_1781 0.89 -0.2
1,876,044 - B158DRAFT_1781 0.89 -1.1
1,876,044 - B158DRAFT_1781 0.89 +0.5
1,876,044 - B158DRAFT_1781 0.89 -1.2
1,876,044 - B158DRAFT_1781 0.89 -0.5
1,876,044 - B158DRAFT_1781 0.89 -2.0
1,876,044 - B158DRAFT_1781 0.89 -0.2
1,876,044 - B158DRAFT_1781 0.89 +1.1
1,876,104 - -0.5
1,876,126 + -0.6
1,876,141 - -0.6
1,876,313 + -1.1
1,876,349 - -0.5
1,876,394 + -0.7
1,876,399 + -0.7
1,876,402 - -0.5
1,876,402 - -1.0
1,876,402 - -0.4
1,876,438 + -0.7
1,876,457 + -2.6
1,876,466 - -1.7
1,876,468 - -1.8
1,876,494 - -1.0
1,876,500 + +0.2
1,876,500 + -3.5
1,876,503 - -0.8
1,876,506 - -1.2
1,876,511 - +0.1
1,876,511 - -1.4
1,876,513 - -1.1
1,876,571 - -0.3
1,876,696 - -1.0
1,876,723 + +0.5
1,876,741 + B158DRAFT_1782 0.10 -0.5
1,876,853 + B158DRAFT_1782 0.19 +0.4
1,876,853 + B158DRAFT_1782 0.19 -0.7
1,876,860 + B158DRAFT_1782 0.20 +0.8
1,876,861 - B158DRAFT_1782 0.20 +1.1
1,876,861 - B158DRAFT_1782 0.20 +0.1
1,876,861 - B158DRAFT_1782 0.20 -1.5
1,876,861 - B158DRAFT_1782 0.20 -1.4
1,876,861 - B158DRAFT_1782 0.20 -0.1
1,876,861 - B158DRAFT_1782 0.20 +0.7
1,876,861 - B158DRAFT_1782 0.20 -1.5
1,876,876 - B158DRAFT_1782 0.21 +0.9
1,876,904 - B158DRAFT_1782 0.23 -1.4
1,876,923 + B158DRAFT_1782 0.24 -4.4
1,876,943 - B158DRAFT_1782 0.26 +0.8
1,876,993 + B158DRAFT_1782 0.30 +0.4
1,877,009 - B158DRAFT_1782 0.31 +0.4
1,877,105 - B158DRAFT_1782 0.38 +0.1
1,877,115 - B158DRAFT_1782 0.39 -1.3
1,877,139 - B158DRAFT_1782 0.41 -0.1
1,877,167 + B158DRAFT_1782 0.43 -0.2
1,877,175 - B158DRAFT_1782 0.44 +0.1
1,877,206 - B158DRAFT_1782 0.46 +0.8
1,877,217 - B158DRAFT_1782 0.47 +0.6
1,877,217 - B158DRAFT_1782 0.47 +0.3
1,877,217 - B158DRAFT_1782 0.47 +0.3
1,877,217 - B158DRAFT_1782 0.47 +0.7
1,877,220 + B158DRAFT_1782 0.47 -1.8
1,877,245 + B158DRAFT_1782 0.49 +0.1
1,877,245 - B158DRAFT_1782 0.49 -0.0
1,877,252 + B158DRAFT_1782 0.50 +0.7
1,877,257 + B158DRAFT_1782 0.50 -3.0
1,877,292 + B158DRAFT_1782 0.53 -0.8
1,877,300 - B158DRAFT_1782 0.53 -1.2
1,877,302 + B158DRAFT_1782 0.54 -0.9
1,877,302 + B158DRAFT_1782 0.54 -1.1
1,877,302 + B158DRAFT_1782 0.54 -0.3
1,877,302 + B158DRAFT_1782 0.54 -1.1
1,877,302 + B158DRAFT_1782 0.54 -0.3
1,877,302 + B158DRAFT_1782 0.54 -1.8
1,877,308 - B158DRAFT_1782 0.54 -0.1
1,877,310 - B158DRAFT_1782 0.54 -0.2
1,877,310 - B158DRAFT_1782 0.54 +0.2
1,877,310 - B158DRAFT_1782 0.54 -0.1
1,877,331 + B158DRAFT_1782 0.56 +1.8
1,877,339 - B158DRAFT_1782 0.56 +0.2
1,877,404 + B158DRAFT_1782 0.61 -1.0
1,877,411 + B158DRAFT_1782 0.62 -0.5
1,877,411 + B158DRAFT_1782 0.62 -0.1
1,877,558 + B158DRAFT_1782 0.73 +0.2
1,877,558 + B158DRAFT_1782 0.73 +0.5
1,877,558 + B158DRAFT_1782 0.73 -1.7
1,877,588 + B158DRAFT_1782 0.75 -1.9
1,877,645 - B158DRAFT_1782 0.80 -0.3
1,877,853 + -0.1
1,877,978 - -1.6
1,877,982 + +0.3
1,878,056 - B158DRAFT_1783 0.12 -1.4
1,878,065 - B158DRAFT_1783 0.13 -1.6
1,878,234 - B158DRAFT_1783 0.33 -2.4
1,878,286 - B158DRAFT_1783 0.40 +0.7
1,878,389 - B158DRAFT_1783 0.52 +0.1
1,878,395 + B158DRAFT_1783 0.53 +0.9
1,878,454 - B158DRAFT_1783 0.60 -0.6
1,878,530 + B158DRAFT_1783 0.69 +0.4
1,878,551 + B158DRAFT_1783 0.71 -0.3
1,878,551 + B158DRAFT_1783 0.71 -2.2
1,878,559 - B158DRAFT_1783 0.72 -1.3
1,878,576 + B158DRAFT_1783 0.74 -0.9
1,878,576 + B158DRAFT_1783 0.74 +0.8
1,878,576 + B158DRAFT_1783 0.74 +2.8
1,878,576 + B158DRAFT_1783 0.74 -0.8
1,878,584 - B158DRAFT_1783 0.75 -0.6
1,878,606 - B158DRAFT_1783 0.78 -1.5
1,878,608 + B158DRAFT_1783 0.78 +0.3
1,878,645 + B158DRAFT_1783 0.83 -0.7
1,878,645 + B158DRAFT_1783 0.83 -3.0
1,878,655 + B158DRAFT_1783 0.84 -1.3
1,878,663 - B158DRAFT_1783 0.85 +0.3
1,878,679 + B158DRAFT_1783 0.87 -0.0
1,878,687 - B158DRAFT_1783 0.88 -1.6
1,878,775 + -2.1
1,878,775 + +0.2
1,878,783 - -2.1
1,878,787 + -0.2
1,878,790 - -1.4
1,878,795 - -0.3
1,878,795 - -0.0
1,878,803 + -0.4
1,878,822 + -1.3
1,878,830 - B158DRAFT_1784 0.10 -0.4
1,878,830 - B158DRAFT_1784 0.10 +1.1

Or see this region's nucleotide sequence