Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1181 and B158DRAFT_1182 are separated by 28 nucleotides B158DRAFT_1182 and B158DRAFT_1183 are separated by 68 nucleotides B158DRAFT_1183 and B158DRAFT_1184 are separated by 48 nucleotides
B158DRAFT_1181: B158DRAFT_1181 - diguanylate cyclase (GGDEF) domain, at 1,220,952 to 1,222,853
_1181
B158DRAFT_1182: B158DRAFT_1182 - TIGR03643 family protein, at 1,222,882 to 1,223,127
_1182
B158DRAFT_1183: B158DRAFT_1183 - hypothetical protein, at 1,223,196 to 1,223,933
_1183
B158DRAFT_1184: B158DRAFT_1184 - hypothetical protein, at 1,223,982 to 1,224,341
_1184
Position (kb)
1222
1223
1224 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1221.887 kb on - strand, within B158DRAFT_1181 at 1221.887 kb on - strand, within B158DRAFT_1181 at 1221.942 kb on - strand, within B158DRAFT_1181 at 1221.947 kb on - strand, within B158DRAFT_1181 at 1222.063 kb on + strand, within B158DRAFT_1181 at 1222.086 kb on - strand, within B158DRAFT_1181 at 1222.091 kb on - strand, within B158DRAFT_1181 at 1222.091 kb on - strand, within B158DRAFT_1181 at 1222.134 kb on - strand, within B158DRAFT_1181 at 1222.144 kb on - strand, within B158DRAFT_1181 at 1222.157 kb on + strand, within B158DRAFT_1181 at 1222.165 kb on - strand, within B158DRAFT_1181 at 1222.244 kb on + strand, within B158DRAFT_1181 at 1222.244 kb on - strand, within B158DRAFT_1181 at 1222.317 kb on + strand, within B158DRAFT_1181 at 1222.365 kb on - strand, within B158DRAFT_1181 at 1222.383 kb on + strand, within B158DRAFT_1181 at 1222.394 kb on - strand, within B158DRAFT_1181 at 1222.411 kb on + strand, within B158DRAFT_1181 at 1222.477 kb on + strand, within B158DRAFT_1181 at 1222.610 kb on - strand, within B158DRAFT_1181 at 1222.646 kb on - strand, within B158DRAFT_1181 at 1222.802 kb on + strand at 1222.810 kb on - strand at 1222.810 kb on - strand at 1222.810 kb on - strand at 1222.810 kb on - strand at 1222.840 kb on + strand at 1222.840 kb on + strand at 1222.840 kb on + strand at 1222.848 kb on - strand at 1222.848 kb on - strand at 1222.894 kb on + strand at 1222.902 kb on - strand at 1222.907 kb on - strand, within B158DRAFT_1182 at 1222.923 kb on + strand, within B158DRAFT_1182 at 1222.931 kb on - strand, within B158DRAFT_1182 at 1222.997 kb on + strand, within B158DRAFT_1182 at 1222.998 kb on + strand, within B158DRAFT_1182 at 1222.999 kb on + strand, within B158DRAFT_1182 at 1223.007 kb on - strand, within B158DRAFT_1182 at 1223.007 kb on - strand, within B158DRAFT_1182 at 1223.017 kb on - strand, within B158DRAFT_1182 at 1223.042 kb on - strand, within B158DRAFT_1182 at 1223.053 kb on + strand, within B158DRAFT_1182 at 1223.053 kb on + strand, within B158DRAFT_1182 at 1223.053 kb on + strand, within B158DRAFT_1182 at 1223.152 kb on - strand at 1223.354 kb on + strand, within B158DRAFT_1183 at 1223.362 kb on - strand, within B158DRAFT_1183 at 1223.412 kb on - strand, within B158DRAFT_1183 at 1223.414 kb on + strand, within B158DRAFT_1183 at 1223.414 kb on + strand, within B158DRAFT_1183 at 1223.465 kb on - strand, within B158DRAFT_1183 at 1223.494 kb on + strand, within B158DRAFT_1183 at 1223.561 kb on + strand, within B158DRAFT_1183 at 1223.561 kb on + strand, within B158DRAFT_1183 at 1223.561 kb on + strand, within B158DRAFT_1183 at 1223.569 kb on - strand, within B158DRAFT_1183 at 1223.569 kb on - strand, within B158DRAFT_1183 at 1223.569 kb on - strand, within B158DRAFT_1183 at 1223.611 kb on - strand, within B158DRAFT_1183 at 1223.612 kb on + strand, within B158DRAFT_1183 at 1223.675 kb on + strand, within B158DRAFT_1183 at 1223.675 kb on + strand, within B158DRAFT_1183 at 1223.675 kb on + strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.683 kb on - strand, within B158DRAFT_1183 at 1223.698 kb on + strand, within B158DRAFT_1183 at 1223.698 kb on - strand, within B158DRAFT_1183 at 1223.698 kb on - strand, within B158DRAFT_1183 at 1223.708 kb on + strand, within B158DRAFT_1183 at 1223.708 kb on + strand, within B158DRAFT_1183 at 1223.716 kb on - strand, within B158DRAFT_1183 at 1223.746 kb on + strand, within B158DRAFT_1183 at 1223.751 kb on + strand, within B158DRAFT_1183 at 1223.754 kb on - strand, within B158DRAFT_1183 at 1223.806 kb on - strand, within B158DRAFT_1183 at 1223.817 kb on + strand, within B158DRAFT_1183 at 1223.825 kb on + strand, within B158DRAFT_1183 at 1223.836 kb on + strand, within B158DRAFT_1183 at 1223.846 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.858 kb on + strand, within B158DRAFT_1183 at 1223.866 kb on - strand at 1223.866 kb on - strand at 1223.923 kb on - strand at 1223.923 kb on - strand at 1224.058 kb on - strand, within B158DRAFT_1184 at 1224.058 kb on - strand, within B158DRAFT_1184
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,221,887 - B158DRAFT_1181 0.49 -0.2 1,221,887 - B158DRAFT_1181 0.49 +0.2 1,221,942 - B158DRAFT_1181 0.52 -0.3 1,221,947 - B158DRAFT_1181 0.52 -2.0 1,222,063 + B158DRAFT_1181 0.58 -0.3 1,222,086 - B158DRAFT_1181 0.60 +0.7 1,222,091 - B158DRAFT_1181 0.60 +2.5 1,222,091 - B158DRAFT_1181 0.60 -1.1 1,222,134 - B158DRAFT_1181 0.62 +0.7 1,222,144 - B158DRAFT_1181 0.63 -0.3 1,222,157 + B158DRAFT_1181 0.63 -1.0 1,222,165 - B158DRAFT_1181 0.64 -0.2 1,222,244 + B158DRAFT_1181 0.68 +1.8 1,222,244 - B158DRAFT_1181 0.68 +0.0 1,222,317 + B158DRAFT_1181 0.72 +0.0 1,222,365 - B158DRAFT_1181 0.74 -0.6 1,222,383 + B158DRAFT_1181 0.75 -0.2 1,222,394 - B158DRAFT_1181 0.76 -1.3 1,222,411 + B158DRAFT_1181 0.77 -1.0 1,222,477 + B158DRAFT_1181 0.80 -1.3 1,222,610 - B158DRAFT_1181 0.87 -0.1 1,222,646 - B158DRAFT_1181 0.89 -1.4 1,222,802 + +0.9 1,222,810 - -0.5 1,222,810 - +0.1 1,222,810 - -0.9 1,222,810 - -0.8 1,222,840 + +0.7 1,222,840 + +0.4 1,222,840 + -1.9 1,222,848 - -0.0 1,222,848 - -0.4 1,222,894 + -0.2 1,222,902 - -1.4 1,222,907 - B158DRAFT_1182 0.10 +1.9 1,222,923 + B158DRAFT_1182 0.17 -0.7 1,222,931 - B158DRAFT_1182 0.20 -0.6 1,222,997 + B158DRAFT_1182 0.47 -0.2 1,222,998 + B158DRAFT_1182 0.47 -1.3 1,222,999 + B158DRAFT_1182 0.48 -1.7 1,223,007 - B158DRAFT_1182 0.51 +0.1 1,223,007 - B158DRAFT_1182 0.51 -0.2 1,223,017 - B158DRAFT_1182 0.55 -0.1 1,223,042 - B158DRAFT_1182 0.65 +3.4 1,223,053 + B158DRAFT_1182 0.70 -1.2 1,223,053 + B158DRAFT_1182 0.70 +1.2 1,223,053 + B158DRAFT_1182 0.70 +1.0 1,223,152 - -2.0 1,223,354 + B158DRAFT_1183 0.21 -0.0 1,223,362 - B158DRAFT_1183 0.22 -0.2 1,223,412 - B158DRAFT_1183 0.29 +0.1 1,223,414 + B158DRAFT_1183 0.30 -1.6 1,223,414 + B158DRAFT_1183 0.30 -0.3 1,223,465 - B158DRAFT_1183 0.36 -1.5 1,223,494 + B158DRAFT_1183 0.40 -0.7 1,223,561 + B158DRAFT_1183 0.49 +0.1 1,223,561 + B158DRAFT_1183 0.49 -1.0 1,223,561 + B158DRAFT_1183 0.49 -1.8 1,223,569 - B158DRAFT_1183 0.51 +0.8 1,223,569 - B158DRAFT_1183 0.51 -0.8 1,223,569 - B158DRAFT_1183 0.51 +0.4 1,223,611 - B158DRAFT_1183 0.56 -0.6 1,223,612 + B158DRAFT_1183 0.56 +0.1 1,223,675 + B158DRAFT_1183 0.65 +0.8 1,223,675 + B158DRAFT_1183 0.65 -1.2 1,223,675 + B158DRAFT_1183 0.65 +0.7 1,223,683 - B158DRAFT_1183 0.66 +0.5 1,223,683 - B158DRAFT_1183 0.66 -2.5 1,223,683 - B158DRAFT_1183 0.66 -0.3 1,223,683 - B158DRAFT_1183 0.66 -0.1 1,223,683 - B158DRAFT_1183 0.66 -0.9 1,223,698 + B158DRAFT_1183 0.68 -1.2 1,223,698 - B158DRAFT_1183 0.68 +0.0 1,223,698 - B158DRAFT_1183 0.68 -0.8 1,223,708 + B158DRAFT_1183 0.69 -2.8 1,223,708 + B158DRAFT_1183 0.69 +0.2 1,223,716 - B158DRAFT_1183 0.70 -2.0 1,223,746 + B158DRAFT_1183 0.75 +0.7 1,223,751 + B158DRAFT_1183 0.75 +0.9 1,223,754 - B158DRAFT_1183 0.76 +1.5 1,223,806 - B158DRAFT_1183 0.83 +1.6 1,223,817 + B158DRAFT_1183 0.84 +1.1 1,223,825 + B158DRAFT_1183 0.85 -0.0 1,223,836 + B158DRAFT_1183 0.87 +0.5 1,223,846 + B158DRAFT_1183 0.88 -0.1 1,223,858 + B158DRAFT_1183 0.90 -0.3 1,223,858 + B158DRAFT_1183 0.90 +0.2 1,223,858 + B158DRAFT_1183 0.90 +0.6 1,223,858 + B158DRAFT_1183 0.90 -0.6 1,223,866 - -0.1 1,223,866 - -1.0 1,223,923 - +2.2 1,223,923 - -0.5 1,224,058 - B158DRAFT_1184 0.21 +0.1 1,224,058 - B158DRAFT_1184 0.21 -1.5
Or see this region's nucleotide sequence