Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1152 and B158DRAFT_1153 are separated by 110 nucleotides B158DRAFT_1153 and B158DRAFT_1154 are separated by 55 nucleotides B158DRAFT_1154 and B158DRAFT_1155 are separated by 25 nucleotides
B158DRAFT_1152: B158DRAFT_1152 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 1,187,825 to 1,188,964
_1152
B158DRAFT_1153: B158DRAFT_1153 - histidyl-tRNA synthetase (EC 6.1.1.21), at 1,189,075 to 1,190,346
_1153
B158DRAFT_1154: B158DRAFT_1154 - Uncharacterized protein conserved in bacteria, at 1,190,402 to 1,191,031
_1154
B158DRAFT_1155: B158DRAFT_1155 - Beta-barrel assembly machine subunit BamB, at 1,191,057 to 1,192,223
_1155
Position (kb)
1189
1190
1191 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.354 kb on + strand at 1190.362 kb on - strand at 1190.362 kb on - strand at 1190.520 kb on + strand, within B158DRAFT_1154 at 1190.543 kb on - strand, within B158DRAFT_1154 at 1190.566 kb on - strand, within B158DRAFT_1154 at 1190.618 kb on - strand, within B158DRAFT_1154 at 1190.689 kb on - strand, within B158DRAFT_1154 at 1190.856 kb on + strand, within B158DRAFT_1154
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,190,354 + -3.9 1,190,354 + -1.1 1,190,354 + -0.8 1,190,354 + +0.3 1,190,354 + +0.1 1,190,354 + -0.9 1,190,354 + -0.3 1,190,354 + -1.5 1,190,362 - -3.2 1,190,362 - -1.3 1,190,520 + B158DRAFT_1154 0.19 -1.2 1,190,543 - B158DRAFT_1154 0.22 -1.1 1,190,566 - B158DRAFT_1154 0.26 -4.1 1,190,618 - B158DRAFT_1154 0.34 -0.5 1,190,689 - B158DRAFT_1154 0.46 -2.7 1,190,856 + B158DRAFT_1154 0.72 -2.7
Or see this region's nucleotide sequence