Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0889

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0887 and B158DRAFT_0888 are separated by 61 nucleotidesB158DRAFT_0888 and B158DRAFT_0889 are separated by 84 nucleotidesB158DRAFT_0889 and B158DRAFT_0890 are separated by 194 nucleotides B158DRAFT_0887: B158DRAFT_0887 - single-strand binding protein, at 907,310 to 907,771 _0887 B158DRAFT_0888: B158DRAFT_0888 - Integral membrane protein, interacts with FtsH, at 907,833 to 908,537 _0888 B158DRAFT_0889: B158DRAFT_0889 - Small-conductance mechanosensitive channel, at 908,622 to 909,707 _0889 B158DRAFT_0890: B158DRAFT_0890 - Phosphate-selective porin, at 909,902 to 911,038 _0890 Position (kb) 908 909 910Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3at 907.765 kb on + strandat 907.805 kb on + strandat 907.849 kb on + strandat 907.875 kb on + strandat 907.949 kb on + strand, within B158DRAFT_0888at 907.957 kb on - strand, within B158DRAFT_0888at 907.957 kb on - strand, within B158DRAFT_0888at 907.962 kb on - strand, within B158DRAFT_0888at 908.009 kb on + strand, within B158DRAFT_0888at 908.152 kb on + strand, within B158DRAFT_0888at 908.199 kb on - strand, within B158DRAFT_0888at 908.243 kb on - strand, within B158DRAFT_0888at 908.260 kb on + strand, within B158DRAFT_0888at 908.280 kb on - strand, within B158DRAFT_0888at 908.325 kb on + strand, within B158DRAFT_0888at 908.325 kb on + strand, within B158DRAFT_0888at 908.325 kb on + strand, within B158DRAFT_0888at 908.333 kb on - strand, within B158DRAFT_0888at 908.333 kb on - strand, within B158DRAFT_0888at 908.333 kb on - strand, within B158DRAFT_0888at 908.333 kb on - strand, within B158DRAFT_0888at 908.379 kb on - strand, within B158DRAFT_0888at 908.379 kb on - strand, within B158DRAFT_0888at 908.516 kb on + strandat 908.535 kb on - strandat 908.595 kb on + strandat 908.595 kb on + strandat 908.595 kb on + strandat 908.603 kb on - strandat 908.677 kb on + strandat 908.685 kb on - strandat 908.727 kb on - strandat 908.822 kb on - strand, within B158DRAFT_0889at 908.863 kb on - strand, within B158DRAFT_0889at 908.877 kb on + strand, within B158DRAFT_0889at 908.998 kb on - strand, within B158DRAFT_0889at 909.000 kb on + strand, within B158DRAFT_0889at 909.028 kb on - strand, within B158DRAFT_0889at 909.043 kb on + strand, within B158DRAFT_0889at 909.063 kb on + strand, within B158DRAFT_0889at 909.071 kb on - strand, within B158DRAFT_0889at 909.118 kb on + strand, within B158DRAFT_0889at 909.145 kb on + strand, within B158DRAFT_0889at 909.161 kb on - strand, within B158DRAFT_0889at 909.244 kb on + strand, within B158DRAFT_0889at 909.325 kb on - strand, within B158DRAFT_0889at 909.346 kb on + strand, within B158DRAFT_0889at 909.354 kb on - strand, within B158DRAFT_0889at 909.354 kb on - strand, within B158DRAFT_0889at 909.354 kb on - strand, within B158DRAFT_0889at 909.370 kb on + strand, within B158DRAFT_0889at 909.378 kb on - strand, within B158DRAFT_0889at 909.435 kb on + strand, within B158DRAFT_0889at 909.435 kb on + strand, within B158DRAFT_0889at 909.435 kb on + strand, within B158DRAFT_0889at 909.435 kb on + strand, within B158DRAFT_0889at 909.443 kb on - strand, within B158DRAFT_0889at 909.443 kb on - strand, within B158DRAFT_0889at 909.443 kb on - strand, within B158DRAFT_0889at 909.448 kb on - strand, within B158DRAFT_0889at 909.664 kb on + strandat 909.664 kb on + strandat 909.664 kb on + strandat 909.664 kb on + strandat 909.664 kb on + strandat 909.667 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.672 kb on - strandat 909.677 kb on - strandat 909.678 kb on + strandat 909.764 kb on - strandat 909.764 kb on - strandat 909.801 kb on + strandat 909.801 kb on + strandat 909.809 kb on - strandat 909.809 kb on - strandat 910.056 kb on - strand, within B158DRAFT_0890at 910.107 kb on + strand, within B158DRAFT_0890at 910.161 kb on + strand, within B158DRAFT_0890at 910.166 kb on + strand, within B158DRAFT_0890at 910.174 kb on - strand, within B158DRAFT_0890at 910.275 kb on - strand, within B158DRAFT_0890at 910.456 kb on + strand, within B158DRAFT_0890

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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907,765 + -0.5
907,805 + -0.2
907,849 + +0.4
907,875 + -0.3
907,949 + B158DRAFT_0888 0.16 -1.0
907,957 - B158DRAFT_0888 0.18 +1.5
907,957 - B158DRAFT_0888 0.18 -0.5
907,962 - B158DRAFT_0888 0.18 -0.8
908,009 + B158DRAFT_0888 0.25 -0.6
908,152 + B158DRAFT_0888 0.45 -0.5
908,199 - B158DRAFT_0888 0.52 +0.1
908,243 - B158DRAFT_0888 0.58 -0.6
908,260 + B158DRAFT_0888 0.61 +0.3
908,280 - B158DRAFT_0888 0.63 +0.3
908,325 + B158DRAFT_0888 0.70 -0.3
908,325 + B158DRAFT_0888 0.70 -0.6
908,325 + B158DRAFT_0888 0.70 -1.4
908,333 - B158DRAFT_0888 0.71 -0.1
908,333 - B158DRAFT_0888 0.71 -0.3
908,333 - B158DRAFT_0888 0.71 -0.5
908,333 - B158DRAFT_0888 0.71 +0.4
908,379 - B158DRAFT_0888 0.77 +1.5
908,379 - B158DRAFT_0888 0.77 -0.7
908,516 + +0.2
908,535 - -1.6
908,595 + +0.7
908,595 + -0.7
908,595 + -0.5
908,603 - -0.3
908,677 + +1.1
908,685 - -0.5
908,727 - -2.5
908,822 - B158DRAFT_0889 0.18 +0.2
908,863 - B158DRAFT_0889 0.22 +0.5
908,877 + B158DRAFT_0889 0.23 -0.4
908,998 - B158DRAFT_0889 0.35 -2.2
909,000 + B158DRAFT_0889 0.35 -0.9
909,028 - B158DRAFT_0889 0.37 -0.8
909,043 + B158DRAFT_0889 0.39 -2.3
909,063 + B158DRAFT_0889 0.41 -0.0
909,071 - B158DRAFT_0889 0.41 -0.3
909,118 + B158DRAFT_0889 0.46 -0.0
909,145 + B158DRAFT_0889 0.48 -0.2
909,161 - B158DRAFT_0889 0.50 -2.1
909,244 + B158DRAFT_0889 0.57 +0.1
909,325 - B158DRAFT_0889 0.65 +1.4
909,346 + B158DRAFT_0889 0.67 +1.0
909,354 - B158DRAFT_0889 0.67 -0.0
909,354 - B158DRAFT_0889 0.67 -0.8
909,354 - B158DRAFT_0889 0.67 -0.8
909,370 + B158DRAFT_0889 0.69 +0.4
909,378 - B158DRAFT_0889 0.70 -1.1
909,435 + B158DRAFT_0889 0.75 -1.0
909,435 + B158DRAFT_0889 0.75 -0.5
909,435 + B158DRAFT_0889 0.75 +0.9
909,435 + B158DRAFT_0889 0.75 -0.1
909,443 - B158DRAFT_0889 0.76 -1.4
909,443 - B158DRAFT_0889 0.76 -1.6
909,443 - B158DRAFT_0889 0.76 +0.3
909,448 - B158DRAFT_0889 0.76 +0.1
909,664 + -0.7
909,664 + +0.2
909,664 + +0.1
909,664 + -0.1
909,664 + +0.2
909,667 - +1.0
909,672 - -0.7
909,672 - -2.2
909,672 - -0.1
909,672 - +0.2
909,672 - -0.7
909,672 - -1.8
909,672 - -0.0
909,672 - -1.3
909,672 - -1.1
909,677 - -0.5
909,678 + +1.5
909,764 - -1.4
909,764 - -0.3
909,801 + +0.0
909,801 + +2.8
909,809 - -0.4
909,809 - -2.4
910,056 - B158DRAFT_0890 0.14 -4.7
910,107 + B158DRAFT_0890 0.18 -5.3
910,161 + B158DRAFT_0890 0.23 -3.0
910,166 + B158DRAFT_0890 0.23 -3.8
910,174 - B158DRAFT_0890 0.24 -3.4
910,275 - B158DRAFT_0890 0.33 -4.3
910,456 + B158DRAFT_0890 0.49 -3.2

Or see this region's nucleotide sequence