Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0684

Experiment: motility

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0683 and B158DRAFT_0684 are separated by 216 nucleotidesB158DRAFT_0684 and B158DRAFT_0685 are separated by 50 nucleotides B158DRAFT_0683: B158DRAFT_0683 - Transcriptional accessory protein, at 683,240 to 685,561 _0683 B158DRAFT_0684: B158DRAFT_0684 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 685,778 to 686,500 _0684 B158DRAFT_0685: B158DRAFT_0685 - Signal transduction histidine kinase, at 686,551 to 687,855 _0685 Position (kb) 685 686 687Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 684.823 kb on - strand, within B158DRAFT_0683at 684.824 kb on - strand, within B158DRAFT_0683at 684.926 kb on - strand, within B158DRAFT_0683at 684.927 kb on + strand, within B158DRAFT_0683at 684.935 kb on - strand, within B158DRAFT_0683at 684.937 kb on + strand, within B158DRAFT_0683at 684.964 kb on - strand, within B158DRAFT_0683at 684.980 kb on - strand, within B158DRAFT_0683at 684.980 kb on - strand, within B158DRAFT_0683at 685.011 kb on + strand, within B158DRAFT_0683at 685.245 kb on - strand, within B158DRAFT_0683at 685.255 kb on + strand, within B158DRAFT_0683at 685.275 kb on + strand, within B158DRAFT_0683at 685.283 kb on - strand, within B158DRAFT_0683at 685.283 kb on - strand, within B158DRAFT_0683at 685.302 kb on + strand, within B158DRAFT_0683at 685.317 kb on - strand, within B158DRAFT_0683at 685.333 kb on + strandat 685.341 kb on - strandat 685.341 kb on - strandat 685.356 kb on - strandat 685.374 kb on - strandat 685.411 kb on + strandat 685.416 kb on + strandat 685.424 kb on - strandat 685.462 kb on + strandat 685.475 kb on + strandat 685.500 kb on + strandat 685.508 kb on - strandat 685.522 kb on + strandat 685.522 kb on + strandat 685.537 kb on - strandat 685.537 kb on - strandat 685.599 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.646 kb on + strandat 685.649 kb on - strandat 685.654 kb on - strandat 685.657 kb on + strandat 685.665 kb on - strandat 685.665 kb on - strandat 685.841 kb on - strandat 685.856 kb on + strand, within B158DRAFT_0684at 685.905 kb on + strand, within B158DRAFT_0684at 686.042 kb on + strand, within B158DRAFT_0684at 686.061 kb on + strand, within B158DRAFT_0684at 686.073 kb on + strand, within B158DRAFT_0684at 686.089 kb on + strand, within B158DRAFT_0684at 686.097 kb on - strand, within B158DRAFT_0684at 686.133 kb on - strand, within B158DRAFT_0684at 686.135 kb on + strand, within B158DRAFT_0684at 686.135 kb on + strand, within B158DRAFT_0684at 686.157 kb on - strand, within B158DRAFT_0684at 686.189 kb on + strand, within B158DRAFT_0684at 686.189 kb on + strand, within B158DRAFT_0684at 686.197 kb on - strand, within B158DRAFT_0684at 686.213 kb on - strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.284 kb on + strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.292 kb on - strand, within B158DRAFT_0684at 686.312 kb on - strand, within B158DRAFT_0684at 686.361 kb on + strand, within B158DRAFT_0684at 686.369 kb on - strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.379 kb on + strand, within B158DRAFT_0684at 686.400 kb on - strand, within B158DRAFT_0684at 686.413 kb on + strand, within B158DRAFT_0684at 686.452 kb on + strandat 686.452 kb on + strandat 686.461 kb on - strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.494 kb on + strandat 686.499 kb on + strandat 686.502 kb on - strandat 686.502 kb on - strandat 686.502 kb on - strandat 686.510 kb on - strandat 686.585 kb on + strandat 686.585 kb on + strandat 686.683 kb on + strand, within B158DRAFT_0685at 686.805 kb on + strand, within B158DRAFT_0685at 686.810 kb on + strand, within B158DRAFT_0685at 686.824 kb on - strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.841 kb on + strand, within B158DRAFT_0685at 686.843 kb on + strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.849 kb on - strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.876 kb on + strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.884 kb on - strand, within B158DRAFT_0685at 686.896 kb on - strand, within B158DRAFT_0685at 686.990 kb on + strand, within B158DRAFT_0685at 687.087 kb on - strand, within B158DRAFT_0685at 687.184 kb on - strand, within B158DRAFT_0685at 687.194 kb on + strand, within B158DRAFT_0685at 687.224 kb on + strand, within B158DRAFT_0685at 687.232 kb on - strand, within B158DRAFT_0685at 687.280 kb on + strand, within B158DRAFT_0685at 687.288 kb on - strand, within B158DRAFT_0685at 687.288 kb on - strand, within B158DRAFT_0685at 687.295 kb on - strand, within B158DRAFT_0685at 687.325 kb on + strand, within B158DRAFT_0685at 687.339 kb on - strand, within B158DRAFT_0685at 687.343 kb on + strand, within B158DRAFT_0685at 687.387 kb on + strand, within B158DRAFT_0685at 687.472 kb on + strand, within B158DRAFT_0685at 687.492 kb on + strand, within B158DRAFT_0685at 687.497 kb on + strand, within B158DRAFT_0685

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction motility
remove
684,823 - B158DRAFT_0683 0.68 -0.7
684,824 - B158DRAFT_0683 0.68 +0.1
684,926 - B158DRAFT_0683 0.73 -0.5
684,927 + B158DRAFT_0683 0.73 -2.8
684,935 - B158DRAFT_0683 0.73 -0.0
684,937 + B158DRAFT_0683 0.73 +0.1
684,964 - B158DRAFT_0683 0.74 -1.0
684,980 - B158DRAFT_0683 0.75 -0.7
684,980 - B158DRAFT_0683 0.75 -0.4
685,011 + B158DRAFT_0683 0.76 -0.3
685,245 - B158DRAFT_0683 0.86 +0.2
685,255 + B158DRAFT_0683 0.87 +0.7
685,275 + B158DRAFT_0683 0.88 -1.7
685,283 - B158DRAFT_0683 0.88 +0.9
685,283 - B158DRAFT_0683 0.88 -1.6
685,302 + B158DRAFT_0683 0.89 +0.9
685,317 - B158DRAFT_0683 0.89 -0.3
685,333 + -0.5
685,341 - -2.6
685,341 - -1.4
685,356 - -0.5
685,374 - -0.5
685,411 + -0.0
685,416 + -1.3
685,424 - +0.6
685,462 + -0.2
685,475 + +0.9
685,500 + -0.5
685,508 - -1.0
685,522 + -0.4
685,522 + -0.6
685,537 - -0.5
685,537 - -1.0
685,599 + +0.4
685,646 + +0.6
685,646 + -0.6
685,646 + +0.5
685,646 + +0.0
685,646 + -0.6
685,649 - +2.4
685,654 - +3.3
685,657 + +0.1
685,665 - +2.1
685,665 - +1.5
685,841 - -2.4
685,856 + B158DRAFT_0684 0.11 +3.7
685,905 + B158DRAFT_0684 0.18 +3.0
686,042 + B158DRAFT_0684 0.37 +5.8
686,061 + B158DRAFT_0684 0.39 +3.3
686,073 + B158DRAFT_0684 0.41 +1.5
686,089 + B158DRAFT_0684 0.43 +2.7
686,097 - B158DRAFT_0684 0.44 +1.4
686,133 - B158DRAFT_0684 0.49 +5.2
686,135 + B158DRAFT_0684 0.49 +4.1
686,135 + B158DRAFT_0684 0.49 +1.9
686,157 - B158DRAFT_0684 0.52 +3.6
686,189 + B158DRAFT_0684 0.57 +8.4
686,189 + B158DRAFT_0684 0.57 +4.2
686,197 - B158DRAFT_0684 0.58 +6.0
686,213 - B158DRAFT_0684 0.60 +4.0
686,284 + B158DRAFT_0684 0.70 +2.8
686,284 + B158DRAFT_0684 0.70 -2.6
686,284 + B158DRAFT_0684 0.70 +2.8
686,284 + B158DRAFT_0684 0.70 +4.0
686,284 + B158DRAFT_0684 0.70 -1.7
686,284 + B158DRAFT_0684 0.70 +4.0
686,284 + B158DRAFT_0684 0.70 +4.9
686,284 + B158DRAFT_0684 0.70 +3.8
686,292 - B158DRAFT_0684 0.71 -1.5
686,292 - B158DRAFT_0684 0.71 +4.6
686,292 - B158DRAFT_0684 0.71 +3.0
686,292 - B158DRAFT_0684 0.71 +1.3
686,292 - B158DRAFT_0684 0.71 +1.6
686,292 - B158DRAFT_0684 0.71 +3.7
686,312 - B158DRAFT_0684 0.74 +4.1
686,361 + B158DRAFT_0684 0.81 +4.3
686,369 - B158DRAFT_0684 0.82 +4.8
686,379 + B158DRAFT_0684 0.83 +4.5
686,379 + B158DRAFT_0684 0.83 -0.9
686,379 + B158DRAFT_0684 0.83 +2.5
686,400 - B158DRAFT_0684 0.86 +1.5
686,413 + B158DRAFT_0684 0.88 +4.8
686,452 + +4.4
686,452 + -1.4
686,461 - +3.0
686,494 + +1.1
686,494 + +0.0
686,494 + +0.3
686,494 + +0.3
686,499 + -1.6
686,502 - +0.8
686,502 - +2.3
686,502 - +1.7
686,510 - +2.2
686,585 + +2.0
686,585 + +1.7
686,683 + B158DRAFT_0685 0.10 -2.6
686,805 + B158DRAFT_0685 0.19 +1.7
686,810 + B158DRAFT_0685 0.20 +2.3
686,824 - B158DRAFT_0685 0.21 +3.9
686,841 + B158DRAFT_0685 0.22 +4.5
686,841 + B158DRAFT_0685 0.22 +3.3
686,841 + B158DRAFT_0685 0.22 +0.9
686,841 + B158DRAFT_0685 0.22 -1.8
686,843 + B158DRAFT_0685 0.22 +3.3
686,849 - B158DRAFT_0685 0.23 +3.3
686,849 - B158DRAFT_0685 0.23 +3.2
686,849 - B158DRAFT_0685 0.23 +2.0
686,849 - B158DRAFT_0685 0.23 -0.7
686,849 - B158DRAFT_0685 0.23 +2.6
686,849 - B158DRAFT_0685 0.23 +4.9
686,876 + B158DRAFT_0685 0.25 +2.5
686,876 + B158DRAFT_0685 0.25 +4.4
686,876 + B158DRAFT_0685 0.25 +3.1
686,876 + B158DRAFT_0685 0.25 -1.7
686,876 + B158DRAFT_0685 0.25 +1.7
686,876 + B158DRAFT_0685 0.25 +2.0
686,876 + B158DRAFT_0685 0.25 -1.0
686,876 + B158DRAFT_0685 0.25 +3.7
686,876 + B158DRAFT_0685 0.25 +2.7
686,876 + B158DRAFT_0685 0.25 +2.5
686,876 + B158DRAFT_0685 0.25 +3.8
686,884 - B158DRAFT_0685 0.26 +2.6
686,884 - B158DRAFT_0685 0.26 +1.4
686,884 - B158DRAFT_0685 0.26 +4.1
686,884 - B158DRAFT_0685 0.26 +3.6
686,884 - B158DRAFT_0685 0.26 +3.5
686,884 - B158DRAFT_0685 0.26 +3.8
686,884 - B158DRAFT_0685 0.26 +3.0
686,884 - B158DRAFT_0685 0.26 +3.4
686,884 - B158DRAFT_0685 0.26 +3.2
686,884 - B158DRAFT_0685 0.26 -0.4
686,896 - B158DRAFT_0685 0.26 +4.4
686,990 + B158DRAFT_0685 0.34 +3.3
687,087 - B158DRAFT_0685 0.41 +3.5
687,184 - B158DRAFT_0685 0.49 +2.2
687,194 + B158DRAFT_0685 0.49 +1.3
687,224 + B158DRAFT_0685 0.52 +2.6
687,232 - B158DRAFT_0685 0.52 +2.1
687,280 + B158DRAFT_0685 0.56 +0.3
687,288 - B158DRAFT_0685 0.56 +3.2
687,288 - B158DRAFT_0685 0.56 +3.0
687,295 - B158DRAFT_0685 0.57 +3.0
687,325 + B158DRAFT_0685 0.59 +2.8
687,339 - B158DRAFT_0685 0.60 +3.3
687,343 + B158DRAFT_0685 0.61 +4.3
687,387 + B158DRAFT_0685 0.64 +3.9
687,472 + B158DRAFT_0685 0.71 +2.2
687,492 + B158DRAFT_0685 0.72 +3.5
687,497 + B158DRAFT_0685 0.72 +4.0

Or see this region's nucleotide sequence