Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0600

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0598 and B158DRAFT_0599 are separated by 123 nucleotidesB158DRAFT_0599 and B158DRAFT_0600 are separated by 319 nucleotidesB158DRAFT_0600 and B158DRAFT_0601 are separated by 32 nucleotides B158DRAFT_0598: B158DRAFT_0598 - Beta-barrel assembly machine subunit BamE, at 603,225 to 603,545 _0598 B158DRAFT_0599: B158DRAFT_0599 - Fe2+/Zn2+ uptake regulation proteins, at 603,669 to 604,070 _0599 B158DRAFT_0600: B158DRAFT_0600 - hypothetical protein, at 604,390 to 605,163 _0600 B158DRAFT_0601: B158DRAFT_0601 - DNA replication and repair protein RecN, at 605,196 to 606,854 _0601 Position (kb) 604 605 606Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 603.432 kb on - strand, within B158DRAFT_0598at 603.697 kb on + strandat 603.718 kb on + strand, within B158DRAFT_0599at 603.726 kb on - strand, within B158DRAFT_0599at 603.745 kb on + strand, within B158DRAFT_0599at 603.764 kb on - strand, within B158DRAFT_0599at 603.769 kb on - strand, within B158DRAFT_0599at 603.786 kb on + strand, within B158DRAFT_0599at 603.866 kb on - strand, within B158DRAFT_0599at 603.877 kb on + strand, within B158DRAFT_0599at 603.878 kb on + strand, within B158DRAFT_0599at 603.886 kb on - strand, within B158DRAFT_0599at 604.047 kb on - strandat 604.047 kb on - strandat 604.113 kb on + strandat 604.121 kb on - strandat 604.127 kb on - strandat 604.143 kb on + strandat 604.143 kb on - strandat 604.190 kb on + strandat 604.191 kb on + strandat 604.211 kb on - strandat 604.361 kb on + strandat 604.369 kb on - strandat 604.369 kb on - strandat 604.500 kb on - strand, within B158DRAFT_0600at 604.572 kb on + strand, within B158DRAFT_0600at 604.572 kb on + strand, within B158DRAFT_0600at 604.580 kb on - strand, within B158DRAFT_0600at 604.580 kb on - strand, within B158DRAFT_0600at 604.620 kb on - strand, within B158DRAFT_0600at 604.635 kb on - strand, within B158DRAFT_0600at 604.738 kb on + strand, within B158DRAFT_0600at 604.770 kb on - strand, within B158DRAFT_0600at 604.937 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.956 kb on + strand, within B158DRAFT_0600at 604.958 kb on + strand, within B158DRAFT_0600at 604.958 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.964 kb on - strand, within B158DRAFT_0600at 604.966 kb on - strand, within B158DRAFT_0600at 605.004 kb on + strand, within B158DRAFT_0600at 605.120 kb on - strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.132 kb on + strandat 605.158 kb on - strandat 605.236 kb on - strandat 605.291 kb on - strandat 605.346 kb on + strandat 605.364 kb on + strand, within B158DRAFT_0601at 605.382 kb on + strand, within B158DRAFT_0601at 605.465 kb on - strand, within B158DRAFT_0601at 605.482 kb on - strand, within B158DRAFT_0601at 605.529 kb on - strand, within B158DRAFT_0601at 605.572 kb on + strand, within B158DRAFT_0601at 605.603 kb on + strand, within B158DRAFT_0601at 605.603 kb on + strand, within B158DRAFT_0601at 605.611 kb on - strand, within B158DRAFT_0601at 605.700 kb on - strand, within B158DRAFT_0601at 605.741 kb on + strand, within B158DRAFT_0601at 605.762 kb on - strand, within B158DRAFT_0601at 605.786 kb on + strand, within B158DRAFT_0601at 605.811 kb on + strand, within B158DRAFT_0601at 605.882 kb on + strand, within B158DRAFT_0601at 605.882 kb on + strand, within B158DRAFT_0601at 605.882 kb on + strand, within B158DRAFT_0601at 605.890 kb on - strand, within B158DRAFT_0601at 605.890 kb on - strand, within B158DRAFT_0601at 605.908 kb on + strand, within B158DRAFT_0601at 605.913 kb on + strand, within B158DRAFT_0601at 605.921 kb on - strand, within B158DRAFT_0601at 605.944 kb on + strand, within B158DRAFT_0601at 605.945 kb on - strand, within B158DRAFT_0601at 605.971 kb on - strand, within B158DRAFT_0601at 605.980 kb on + strand, within B158DRAFT_0601at 606.022 kb on - strand, within B158DRAFT_0601at 606.022 kb on - strand, within B158DRAFT_0601at 606.033 kb on + strand, within B158DRAFT_0601at 606.113 kb on - strand, within B158DRAFT_0601

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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603,432 - B158DRAFT_0598 0.64 +0.2
603,697 + -0.8
603,718 + B158DRAFT_0599 0.12 -2.6
603,726 - B158DRAFT_0599 0.14 -2.5
603,745 + B158DRAFT_0599 0.19 -2.3
603,764 - B158DRAFT_0599 0.24 -2.7
603,769 - B158DRAFT_0599 0.25 -2.5
603,786 + B158DRAFT_0599 0.29 -1.7
603,866 - B158DRAFT_0599 0.49 -1.3
603,877 + B158DRAFT_0599 0.52 -3.5
603,878 + B158DRAFT_0599 0.52 -1.4
603,886 - B158DRAFT_0599 0.54 -0.0
604,047 - -2.4
604,047 - -1.4
604,113 + -0.8
604,121 - -0.9
604,127 - +0.3
604,143 + +3.1
604,143 - +1.0
604,190 + +0.1
604,191 + -0.2
604,211 - +1.4
604,361 + -1.0
604,369 - +0.3
604,369 - +2.5
604,500 - B158DRAFT_0600 0.14 -0.6
604,572 + B158DRAFT_0600 0.24 +0.4
604,572 + B158DRAFT_0600 0.24 +1.4
604,580 - B158DRAFT_0600 0.25 -0.0
604,580 - B158DRAFT_0600 0.25 +1.3
604,620 - B158DRAFT_0600 0.30 -0.0
604,635 - B158DRAFT_0600 0.32 +1.5
604,738 + B158DRAFT_0600 0.45 +0.4
604,770 - B158DRAFT_0600 0.49 +1.1
604,937 + B158DRAFT_0600 0.71 +0.6
604,956 + B158DRAFT_0600 0.73 +0.2
604,956 + B158DRAFT_0600 0.73 +1.0
604,956 + B158DRAFT_0600 0.73 -0.5
604,956 + B158DRAFT_0600 0.73 -0.2
604,956 + B158DRAFT_0600 0.73 -0.3
604,956 + B158DRAFT_0600 0.73 +0.5
604,956 + B158DRAFT_0600 0.73 +0.0
604,956 + B158DRAFT_0600 0.73 -0.9
604,956 + B158DRAFT_0600 0.73 +0.5
604,958 + B158DRAFT_0600 0.73 -0.1
604,958 - B158DRAFT_0600 0.73 -2.3
604,964 - B158DRAFT_0600 0.74 -1.5
604,964 - B158DRAFT_0600 0.74 -1.1
604,964 - B158DRAFT_0600 0.74 -1.2
604,964 - B158DRAFT_0600 0.74 +1.0
604,964 - B158DRAFT_0600 0.74 +0.2
604,964 - B158DRAFT_0600 0.74 -1.3
604,964 - B158DRAFT_0600 0.74 -0.2
604,964 - B158DRAFT_0600 0.74 -0.0
604,964 - B158DRAFT_0600 0.74 +0.5
604,964 - B158DRAFT_0600 0.74 -1.2
604,966 - B158DRAFT_0600 0.74 -0.0
605,004 + B158DRAFT_0600 0.79 -0.7
605,120 - -0.9
605,132 + +0.9
605,132 + -0.2
605,132 + -0.2
605,132 + -2.3
605,132 + -0.0
605,158 - -0.1
605,236 - -1.6
605,291 - -0.8
605,346 + +1.0
605,364 + B158DRAFT_0601 0.10 -2.3
605,382 + B158DRAFT_0601 0.11 +0.6
605,465 - B158DRAFT_0601 0.16 +1.5
605,482 - B158DRAFT_0601 0.17 +0.6
605,529 - B158DRAFT_0601 0.20 -1.5
605,572 + B158DRAFT_0601 0.23 -0.7
605,603 + B158DRAFT_0601 0.25 -1.2
605,603 + B158DRAFT_0601 0.25 -2.8
605,611 - B158DRAFT_0601 0.25 -0.3
605,700 - B158DRAFT_0601 0.30 -1.1
605,741 + B158DRAFT_0601 0.33 -1.2
605,762 - B158DRAFT_0601 0.34 +1.4
605,786 + B158DRAFT_0601 0.36 -1.9
605,811 + B158DRAFT_0601 0.37 -0.5
605,882 + B158DRAFT_0601 0.41 -1.8
605,882 + B158DRAFT_0601 0.41 -0.6
605,882 + B158DRAFT_0601 0.41 -0.2
605,890 - B158DRAFT_0601 0.42 -1.3
605,890 - B158DRAFT_0601 0.42 +0.9
605,908 + B158DRAFT_0601 0.43 +0.1
605,913 + B158DRAFT_0601 0.43 -0.3
605,921 - B158DRAFT_0601 0.44 -0.5
605,944 + B158DRAFT_0601 0.45 -0.5
605,945 - B158DRAFT_0601 0.45 -0.9
605,971 - B158DRAFT_0601 0.47 +2.6
605,980 + B158DRAFT_0601 0.47 -1.4
606,022 - B158DRAFT_0601 0.50 -2.4
606,022 - B158DRAFT_0601 0.50 +1.1
606,033 + B158DRAFT_0601 0.50 -1.7
606,113 - B158DRAFT_0601 0.55 +0.6

Or see this region's nucleotide sequence