Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0169

Experiment: motility

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0168 and B158DRAFT_0169 are separated by 63 nucleotidesB158DRAFT_0169 and B158DRAFT_0170 are separated by 11 nucleotidesB158DRAFT_0170 and B158DRAFT_0171 are separated by 25 nucleotidesB158DRAFT_0171 and B158DRAFT_0172 are separated by 19 nucleotides B158DRAFT_0168: B158DRAFT_0168 - Dicarboxylate transport., at 165,560 to 168,199 _0168 B158DRAFT_0169: B158DRAFT_0169 - hypothetical protein, at 168,263 to 168,457 _0169 B158DRAFT_0170: B158DRAFT_0170 - Uncharacterized protein conserved in bacteria, at 168,469 to 168,801 _0170 B158DRAFT_0171: B158DRAFT_0171 - Glutathione S-transferase, at 168,827 to 169,423 _0171 B158DRAFT_0172: B158DRAFT_0172 - ATPases of the AAA+ class, at 169,443 to 170,942 _0172 Position (kb) 168 169Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 167.268 kb on + strand, within B158DRAFT_0168at 167.268 kb on + strand, within B158DRAFT_0168at 167.276 kb on - strand, within B158DRAFT_0168at 167.276 kb on - strand, within B158DRAFT_0168at 167.276 kb on - strand, within B158DRAFT_0168at 167.362 kb on - strand, within B158DRAFT_0168at 167.390 kb on + strand, within B158DRAFT_0168at 167.507 kb on + strand, within B158DRAFT_0168at 167.518 kb on + strand, within B158DRAFT_0168at 167.531 kb on - strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.626 kb on + strand, within B158DRAFT_0168at 167.634 kb on - strand, within B158DRAFT_0168at 167.688 kb on + strand, within B158DRAFT_0168at 167.727 kb on - strand, within B158DRAFT_0168at 167.745 kb on + strand, within B158DRAFT_0168at 167.796 kb on + strand, within B158DRAFT_0168at 168.029 kb on + strandat 168.029 kb on - strandat 168.238 kb on + strandat 168.284 kb on + strand, within B158DRAFT_0169at 168.307 kb on + strand, within B158DRAFT_0169at 168.330 kb on - strand, within B158DRAFT_0169at 168.421 kb on + strand, within B158DRAFT_0169at 168.454 kb on - strandat 168.531 kb on - strand, within B158DRAFT_0170at 168.535 kb on + strand, within B158DRAFT_0170at 168.545 kb on + strand, within B158DRAFT_0170at 168.553 kb on - strand, within B158DRAFT_0170at 168.561 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.573 kb on - strand, within B158DRAFT_0170at 168.640 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.743 kb on - strand, within B158DRAFT_0170at 168.839 kb on - strandat 168.934 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.975 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.113 kb on + strand, within B158DRAFT_0171at 169.114 kb on - strand, within B158DRAFT_0171at 169.141 kb on + strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.280 kb on - strand, within B158DRAFT_0171at 169.440 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction motility
remove
167,268 + B158DRAFT_0168 0.65 +0.1
167,268 + B158DRAFT_0168 0.65 +0.8
167,276 - B158DRAFT_0168 0.65 -1.7
167,276 - B158DRAFT_0168 0.65 -0.3
167,276 - B158DRAFT_0168 0.65 +0.8
167,362 - B158DRAFT_0168 0.68 -1.5
167,390 + B158DRAFT_0168 0.69 -0.2
167,507 + B158DRAFT_0168 0.74 -0.2
167,518 + B158DRAFT_0168 0.74 -1.2
167,531 - B158DRAFT_0168 0.75 +0.2
167,586 + B158DRAFT_0168 0.77 -2.2
167,586 + B158DRAFT_0168 0.77 -1.1
167,586 + B158DRAFT_0168 0.77 -2.4
167,586 + B158DRAFT_0168 0.77 -0.4
167,594 - B158DRAFT_0168 0.77 +2.4
167,594 - B158DRAFT_0168 0.77 -0.3
167,594 - B158DRAFT_0168 0.77 -0.4
167,594 - B158DRAFT_0168 0.77 +0.1
167,594 - B158DRAFT_0168 0.77 -0.2
167,594 - B158DRAFT_0168 0.77 -1.3
167,626 + B158DRAFT_0168 0.78 -0.4
167,634 - B158DRAFT_0168 0.79 -2.0
167,688 + B158DRAFT_0168 0.81 +0.7
167,727 - B158DRAFT_0168 0.82 -0.7
167,745 + B158DRAFT_0168 0.83 +0.8
167,796 + B158DRAFT_0168 0.85 +2.1
168,029 + -1.2
168,029 - -0.4
168,238 + -0.1
168,284 + B158DRAFT_0169 0.11 +1.7
168,307 + B158DRAFT_0169 0.23 -1.4
168,330 - B158DRAFT_0169 0.34 +0.8
168,421 + B158DRAFT_0169 0.81 -0.9
168,454 - -0.1
168,531 - B158DRAFT_0170 0.19 -1.5
168,535 + B158DRAFT_0170 0.20 +0.4
168,545 + B158DRAFT_0170 0.23 -1.4
168,553 - B158DRAFT_0170 0.25 -0.6
168,561 - B158DRAFT_0170 0.28 -3.8
168,567 - B158DRAFT_0170 0.29 -1.3
168,567 - B158DRAFT_0170 0.29 +1.0
168,573 - B158DRAFT_0170 0.31 -1.7
168,640 + B158DRAFT_0170 0.51 -0.7
168,735 + B158DRAFT_0170 0.80 -0.6
168,735 + B158DRAFT_0170 0.80 -0.9
168,743 - B158DRAFT_0170 0.82 +1.5
168,839 - -0.2
168,934 + B158DRAFT_0171 0.18 +0.8
168,944 + B158DRAFT_0171 0.20 +1.3
168,944 + B158DRAFT_0171 0.20 -1.2
168,944 + B158DRAFT_0171 0.20 -0.2
168,944 + B158DRAFT_0171 0.20 +0.9
168,944 + B158DRAFT_0171 0.20 +1.3
168,944 + B158DRAFT_0171 0.20 -0.4
168,952 - B158DRAFT_0171 0.21 +0.7
168,952 - B158DRAFT_0171 0.21 -0.1
168,952 - B158DRAFT_0171 0.21 -0.7
168,952 - B158DRAFT_0171 0.21 +0.9
168,952 - B158DRAFT_0171 0.21 -2.6
168,975 + B158DRAFT_0171 0.25 +0.1
168,997 + B158DRAFT_0171 0.28 -0.7
168,997 + B158DRAFT_0171 0.28 +0.6
168,997 + B158DRAFT_0171 0.28 +0.5
168,997 + B158DRAFT_0171 0.28 +2.1
169,005 - B158DRAFT_0171 0.30 -2.9
169,005 - B158DRAFT_0171 0.30 -0.7
169,083 - B158DRAFT_0171 0.43 -0.1
169,083 - B158DRAFT_0171 0.43 -4.0
169,083 - B158DRAFT_0171 0.43 +1.1
169,113 + B158DRAFT_0171 0.48 -0.3
169,114 - B158DRAFT_0171 0.48 +1.1
169,141 + B158DRAFT_0171 0.53 +1.3
169,280 - B158DRAFT_0171 0.76 -1.0
169,280 - B158DRAFT_0171 0.76 -1.2
169,440 - -2.5

Or see this region's nucleotide sequence