Strain Fitness in Agrobacterium fabrum C58 around Atu6124

Experiment: Orotic (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Orotic (N)
140,296	+				-0.1
140,304	+				+0.5
140,378	+				+0.3
140,386	-				-0.6
140,402	+				+0.7
140,420	-		Atu6122	0.10	-0.3
140,435	+		Atu6122	0.15	+0.0
140,436	-		Atu6122	0.16	-0.1
140,484	+		Atu6122	0.31	+0.6
140,484	+		Atu6122	0.31	+0.3
140,484	+		Atu6122	0.31	+2.7
140,492	-		Atu6122	0.33	-0.8
140,492	-		Atu6122	0.33	-1.0
140,492	-		Atu6122	0.33	+1.2
140,524	-		Atu6122	0.43	-0.6
140,524	-		Atu6122	0.43	+1.3
140,529	-		Atu6122	0.45	+0.8
140,531	-		Atu6122	0.46	+0.1
140,550	-		Atu6122	0.52	+1.4
140,586	+		Atu6122	0.63	+0.8
140,586	+		Atu6122	0.63	-0.1
140,586	+		Atu6122	0.63	+0.1
140,589	-		Atu6122	0.64	+1.3
140,591	+		Atu6122	0.65	+1.7
140,594	-		Atu6122	0.66	+1.1
140,594	-		Atu6122	0.66	-0.9
140,594	-		Atu6122	0.66	-0.4
140,594	-		Atu6122	0.66	+2.7
140,594	-		Atu6122	0.66	+0.2
140,594	-		Atu6122	0.66	+1.2
140,604	+		Atu6122	0.69	+1.0
140,621	+		Atu6122	0.74	+1.7
140,621	+		Atu6122	0.74	-0.1
140,623	+		Atu6122	0.75	-0.6
140,631	-		Atu6122	0.77	+0.0
140,661	+		Atu6122	0.87	-0.0
140,669	-		Atu6122	0.90	-0.4
140,684	-				+0.9
140,694	-				+1.4
140,710	+				+0.2
140,713	-				-0.6
140,715	-				+0.9
140,718	-				+0.4
140,718	-				-0.6
140,718	-				+0.4
140,739	+				-0.1
140,802	+				-0.4
140,804	+				+2.2
140,807	-				-0.5
140,810	-				-1.8
140,820	+				+1.5
140,822	-				+0.7
140,838	-				+0.2
140,838	-				+0.0
140,875	-				+0.6
140,885	+				+1.0
140,984	+		Atu6123	0.33	+1.0
140,992	-		Atu6123	0.35	-0.4
140,992	-		Atu6123	0.35	+0.9
140,992	-		Atu6123	0.35	-0.0
141,075	+		Atu6123	0.55	+0.6
141,082	+		Atu6123	0.57	+1.9
141,082	+		Atu6123	0.57	+0.6
141,083	-		Atu6123	0.57	+2.6
141,089	+		Atu6123	0.59	+0.2
141,090	-		Atu6123	0.59	-0.1
141,090	-		Atu6123	0.59	-0.6
141,122	+		Atu6123	0.67	-0.1
141,141	+		Atu6123	0.72	-0.3
141,141	+		Atu6123	0.72	+1.0
141,141	+		Atu6123	0.72	-0.8
141,149	-		Atu6123	0.74	+2.1
141,151	+		Atu6123	0.74	+2.4
141,286	+				-1.6
141,402	+				-0.8
141,438	+				+2.6
141,446	-				+2.5
141,446	-				+0.1
141,446	-				+0.8
141,446	-				+0.3
141,482	+		Atu6124	0.12	+1.2
141,490	-		Atu6124	0.12	+0.1
141,536	-		Atu6124	0.15	+0.5
141,562	-		Atu6124	0.16	+2.2
141,666	-		Atu6124	0.21	-0.4
141,785	+		Atu6124	0.27	-1.5
141,785	+		Atu6124	0.27	-0.1
141,819	+		Atu6124	0.29	-0.6
141,829	+		Atu6124	0.29	+0.4
141,837	-		Atu6124	0.30	-0.3
141,837	-		Atu6124	0.30	+0.0
141,884	+		Atu6124	0.32	+1.3
141,892	-		Atu6124	0.33	+1.9
141,953	-		Atu6124	0.36	+0.2
141,953	-		Atu6124	0.36	+1.3
141,976	+		Atu6124	0.37	+1.7
141,984	-		Atu6124	0.37	+2.2
141,986	+		Atu6124	0.37	-0.2
142,005	-		Atu6124	0.38	+1.9
142,011	+		Atu6124	0.39	+0.0
142,011	+		Atu6124	0.39	+1.0
142,011	+		Atu6124	0.39	+0.8
142,019	-		Atu6124	0.39	+0.4
142,047	+		Atu6124	0.40	+2.2
142,093	+		Atu6124	0.43	-1.1
142,093	+		Atu6124	0.43	+0.8
142,093	+		Atu6124	0.43	+0.2
142,142	+		Atu6124	0.45	-1.2
142,163	+		Atu6124	0.46	+1.5
142,196	+		Atu6124	0.48	+0.6
142,248	-		Atu6124	0.51	+1.0
142,260	+		Atu6124	0.51	+0.8
142,285	+		Atu6124	0.52	-0.6
142,345	+		Atu6124	0.55	-1.0
142,412	+		Atu6124	0.59	+0.9
142,448	+		Atu6124	0.61	+2.3
142,457	+		Atu6124	0.61	-0.6
142,544	-		Atu6124	0.66	-0.2
142,576	+		Atu6124	0.67	+0.9
142,589	-		Atu6124	0.68	+1.0
142,603	+		Atu6124	0.68	+0.0
142,663	+		Atu6124	0.72	+0.8
142,746	+		Atu6124	0.76	+0.4
142,754	-		Atu6124	0.76	+1.2
142,765	+		Atu6124	0.77	-1.7
142,786	+		Atu6124	0.78	+0.2
142,814	-		Atu6124	0.79	-0.1
142,816	+		Atu6124	0.79	+0.8
142,842	+		Atu6124	0.81	+1.0
142,850	-		Atu6124	0.81	+0.7
142,855	-		Atu6124	0.81	-0.3
142,882	+		Atu6124	0.83	-0.1
142,882	+		Atu6124	0.83	-0.9
142,882	+		Atu6124	0.83	+0.5
142,882	+		Atu6124	0.83	+0.3
142,882	+		Atu6124	0.83	+0.6
142,887	+		Atu6124	0.83	-0.4
142,890	-		Atu6124	0.83	-0.3
142,890	-		Atu6124	0.83	-0.6
142,895	-		Atu6124	0.83	+0.0
142,952	+		Atu6124	0.86	-0.3
142,960	-		Atu6124	0.87	+2.5
142,960	-		Atu6124	0.87	-0.5
142,962	+		Atu6124	0.87	-0.6
142,970	-		Atu6124	0.87	-0.8
142,981	-		Atu6124	0.88	-0.4
143,018	-		Atu6124	0.89	-0.1
143,068	+				+0.5
143,068	+				+1.9
143,068	+				+1.0
143,068	+				+0.1
143,068	+				+1.5
143,076	-				-1.0
143,076	-				+1.4
143,083	+				+1.6
143,099	+				-0.8
143,114	+				-0.8
143,243	-		Atu6125	0.13	+0.5
143,259	-		Atu6125	0.19	-1.0
143,338	+		Atu6125	0.51	+0.0
143,338	+		Atu6125	0.51	+0.7
143,343	+		Atu6125	0.53	-0.0
143,343	+		Atu6125	0.53	+0.4
143,346	-		Atu6125	0.54	+1.0
143,403	+		Atu6125	0.78	-0.7
143,430	+		Atu6125	0.89	+0.8
143,430	+		Atu6125	0.89	+1.2
143,440	+				+0.2
143,450	+				+0.3
143,458	-				+1.2
143,485	+		Atu6126	0.18	+2.6
143,485	+		Atu6126	0.18	-1.5
143,493	-		Atu6126	0.21	+0.0
143,493	-		Atu6126	0.21	-0.4
143,493	-		Atu6126	0.21	-0.2
143,493	-		Atu6126	0.21	-0.3
143,534	+		Atu6126	0.34	+2.6
143,567	+		Atu6126	0.45	+0.3
143,584	+		Atu6126	0.51	+2.2
143,585	-		Atu6126	0.52	+0.2
143,585	-		Atu6126	0.52	+1.8
143,598	+		Atu6126	0.56	+1.2
143,621	-		Atu6126	0.64	-0.8
143,621	-		Atu6126	0.64	+0.6
143,658	+		Atu6126	0.76	+1.2
143,670	+		Atu6126	0.80	-0.1
143,718	+				+1.9
143,732	+				+0.1
143,805	+				-0.9
143,805	+				-0.1
143,813	-				+0.6
143,835	+				-0.8
143,891	-				+0.1
143,916	+				+0.4
143,938	+				-1.4
144,001	+				-0.6
144,059	+				+1.2
144,059	+				+0.3
144,162	+				-0.0
144,185	+				+1.4
144,195	+				+2.2
144,218	+				-0.3