Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF261

Experiment: LB_plus_SM_buffer with 6C2_phage 15 MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF259 and GFF260 are separated by 95 nucleotidesGFF260 and GFF261 are separated by 9 nucleotidesGFF261 and GFF262 overlap by 4 nucleotides GFF259 - DNA recombination protein RmuC, at 34,599 to 36,029 GFF259 GFF260 - Ubiquinone/menaquinone biosynthesis methyltransferase UbiE (EC 2.1.1.-) @ 2-heptaprenyl-1,4-naphthoquinone methyltransferase (EC 2.1.1.163), at 36,125 to 36,880 GFF260 GFF261 - Protein YigP (COG3165) clustered with ubiquinone biosynthetic genes, at 36,890 to 37,495 GFF261 GFF262 - Ubiquinone biosynthesis monooxygenase UbiB, at 37,492 to 39,132 GFF262 Position (kb) 36 37 38Strain fitness (log2 ratio) -2 -1 0 1at 36.042 kb on - strandat 36.046 kb on + strandat 36.063 kb on - strandat 36.878 kb on + strandat 36.984 kb on + strand, within GFF261

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Per-strain Table

Position Strand Gene LocusTag Fraction LB_plus_SM_buffer with 6C2_phage 15 MOI
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36,042 - -0.3
36,046 + -0.8
36,063 - -0.7
36,878 + -1.8
36,984 + GFF261 0.16 -1.0

Or see this region's nucleotide sequence