Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1578

Experiment: motility

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1576 and B158DRAFT_1577 are separated by 167 nucleotidesB158DRAFT_1577 and B158DRAFT_1578 are separated by 411 nucleotidesB158DRAFT_1578 and B158DRAFT_1579 are separated by 237 nucleotides B158DRAFT_1576: B158DRAFT_1576 - Uncharacterized conserved protein, at 1,635,184 to 1,635,633 _1576 B158DRAFT_1577: B158DRAFT_1577 - tRNA_Asp_GTC, at 1,635,801 to 1,635,877 _1577 B158DRAFT_1578: B158DRAFT_1578 - signal peptide peptidase SppA, 67K type, at 1,636,289 to 1,638,166 _1578 B158DRAFT_1579: B158DRAFT_1579 - 2,4-dienoyl-CoA reductase (EC 1.3.1.34), at 1,638,404 to 1,640,425 _1579 Position (kb) 1636 1637 1638 1639Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 1635.342 kb on + strand, within B158DRAFT_1576at 1635.342 kb on - strand, within B158DRAFT_1576at 1635.344 kb on + strand, within B158DRAFT_1576at 1635.344 kb on + strand, within B158DRAFT_1576at 1635.352 kb on - strand, within B158DRAFT_1576at 1635.398 kb on + strand, within B158DRAFT_1576at 1635.398 kb on + strand, within B158DRAFT_1576at 1635.398 kb on + strand, within B158DRAFT_1576at 1635.406 kb on - strand, within B158DRAFT_1576at 1635.406 kb on - strand, within B158DRAFT_1576at 1635.419 kb on + strand, within B158DRAFT_1576at 1635.427 kb on - strand, within B158DRAFT_1576at 1635.427 kb on - strand, within B158DRAFT_1576at 1635.435 kb on - strand, within B158DRAFT_1576at 1635.447 kb on + strand, within B158DRAFT_1576at 1635.447 kb on + strand, within B158DRAFT_1576at 1635.447 kb on + strand, within B158DRAFT_1576at 1635.450 kb on - strand, within B158DRAFT_1576at 1635.455 kb on - strand, within B158DRAFT_1576at 1635.455 kb on - strand, within B158DRAFT_1576at 1635.455 kb on - strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.474 kb on + strand, within B158DRAFT_1576at 1635.476 kb on + strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.482 kb on - strand, within B158DRAFT_1576at 1635.484 kb on - strand, within B158DRAFT_1576at 1635.484 kb on - strand, within B158DRAFT_1576at 1635.547 kb on + strand, within B158DRAFT_1576at 1635.826 kb on - strand, within B158DRAFT_1577at 1635.826 kb on - strand, within B158DRAFT_1577at 1635.853 kb on + strand, within B158DRAFT_1577at 1635.864 kb on + strand, within B158DRAFT_1577at 1635.893 kb on + strandat 1635.984 kb on - strandat 1636.054 kb on + strandat 1636.062 kb on - strandat 1636.062 kb on - strandat 1636.107 kb on - strandat 1636.115 kb on - strandat 1636.136 kb on - strandat 1636.300 kb on + strandat 1636.300 kb on + strandat 1636.300 kb on + strandat 1636.300 kb on + strandat 1636.302 kb on + strandat 1636.310 kb on + strandat 1636.310 kb on - strandat 1636.310 kb on - strandat 1636.314 kb on + strandat 1636.333 kb on - strandat 1636.404 kb on + strandat 1636.407 kb on + strandat 1636.440 kb on + strandat 1636.447 kb on - strandat 1636.454 kb on - strandat 1636.466 kb on + strandat 1636.488 kb on + strand, within B158DRAFT_1578at 1636.496 kb on - strand, within B158DRAFT_1578at 1636.496 kb on - strand, within B158DRAFT_1578at 1636.527 kb on + strand, within B158DRAFT_1578at 1636.594 kb on + strand, within B158DRAFT_1578at 1636.666 kb on + strand, within B158DRAFT_1578at 1636.666 kb on + strand, within B158DRAFT_1578at 1636.687 kb on + strand, within B158DRAFT_1578at 1636.687 kb on + strand, within B158DRAFT_1578at 1636.700 kb on + strand, within B158DRAFT_1578at 1636.711 kb on + strand, within B158DRAFT_1578at 1636.719 kb on - strand, within B158DRAFT_1578at 1636.733 kb on - strand, within B158DRAFT_1578at 1636.733 kb on - strand, within B158DRAFT_1578at 1636.821 kb on - strand, within B158DRAFT_1578at 1636.823 kb on + strand, within B158DRAFT_1578at 1636.831 kb on - strand, within B158DRAFT_1578at 1636.831 kb on - strand, within B158DRAFT_1578at 1636.841 kb on + strand, within B158DRAFT_1578at 1636.849 kb on - strand, within B158DRAFT_1578at 1636.849 kb on - strand, within B158DRAFT_1578at 1636.893 kb on + strand, within B158DRAFT_1578at 1636.960 kb on - strand, within B158DRAFT_1578at 1637.025 kb on + strand, within B158DRAFT_1578at 1637.032 kb on + strand, within B158DRAFT_1578at 1637.040 kb on - strand, within B158DRAFT_1578at 1637.101 kb on + strand, within B158DRAFT_1578at 1637.181 kb on - strand, within B158DRAFT_1578at 1637.275 kb on + strand, within B158DRAFT_1578at 1637.316 kb on + strand, within B158DRAFT_1578at 1637.330 kb on + strand, within B158DRAFT_1578at 1637.419 kb on + strand, within B158DRAFT_1578at 1637.474 kb on - strand, within B158DRAFT_1578at 1637.498 kb on - strand, within B158DRAFT_1578at 1637.508 kb on + strand, within B158DRAFT_1578at 1637.528 kb on + strand, within B158DRAFT_1578at 1637.528 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.547 kb on + strand, within B158DRAFT_1578at 1637.555 kb on - strand, within B158DRAFT_1578at 1637.555 kb on - strand, within B158DRAFT_1578at 1637.578 kb on + strand, within B158DRAFT_1578at 1637.586 kb on - strand, within B158DRAFT_1578at 1637.586 kb on - strand, within B158DRAFT_1578at 1637.594 kb on + strand, within B158DRAFT_1578at 1637.594 kb on + strand, within B158DRAFT_1578at 1637.602 kb on - strand, within B158DRAFT_1578at 1637.602 kb on - strand, within B158DRAFT_1578at 1637.627 kb on + strand, within B158DRAFT_1578at 1637.627 kb on + strand, within B158DRAFT_1578at 1637.635 kb on - strand, within B158DRAFT_1578at 1637.635 kb on - strand, within B158DRAFT_1578at 1637.658 kb on - strand, within B158DRAFT_1578at 1637.671 kb on - strand, within B158DRAFT_1578at 1637.691 kb on + strand, within B158DRAFT_1578at 1637.691 kb on + strand, within B158DRAFT_1578at 1637.696 kb on + strand, within B158DRAFT_1578at 1637.699 kb on - strand, within B158DRAFT_1578at 1637.833 kb on + strand, within B158DRAFT_1578at 1637.833 kb on + strand, within B158DRAFT_1578at 1637.833 kb on + strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.841 kb on - strand, within B158DRAFT_1578at 1637.874 kb on + strand, within B158DRAFT_1578at 1637.908 kb on + strand, within B158DRAFT_1578at 1637.915 kb on + strand, within B158DRAFT_1578at 1637.916 kb on - strand, within B158DRAFT_1578at 1637.923 kb on - strand, within B158DRAFT_1578at 1637.947 kb on + strand, within B158DRAFT_1578at 1638.001 kb on - strandat 1638.006 kb on - strandat 1638.010 kb on + strandat 1638.018 kb on - strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.025 kb on + strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.033 kb on - strandat 1638.087 kb on + strandat 1638.235 kb on - strandat 1638.235 kb on - strandat 1638.337 kb on + strandat 1638.360 kb on - strandat 1638.360 kb on - strandat 1638.401 kb on + strandat 1638.419 kb on - strandat 1638.460 kb on - strandat 1638.474 kb on + strandat 1638.474 kb on - strandat 1638.489 kb on + strandat 1638.549 kb on + strandat 1638.559 kb on + strandat 1638.623 kb on - strand, within B158DRAFT_1579at 1638.625 kb on + strand, within B158DRAFT_1579at 1638.625 kb on + strand, within B158DRAFT_1579at 1638.633 kb on - strand, within B158DRAFT_1579at 1638.643 kb on + strand, within B158DRAFT_1579at 1638.651 kb on - strand, within B158DRAFT_1579at 1638.671 kb on + strand, within B158DRAFT_1579at 1638.796 kb on - strand, within B158DRAFT_1579at 1638.866 kb on + strand, within B158DRAFT_1579at 1638.886 kb on - strand, within B158DRAFT_1579at 1638.937 kb on + strand, within B158DRAFT_1579at 1638.942 kb on + strand, within B158DRAFT_1579at 1638.945 kb on - strand, within B158DRAFT_1579at 1638.955 kb on - strand, within B158DRAFT_1579at 1638.963 kb on - strand, within B158DRAFT_1579at 1639.095 kb on - strand, within B158DRAFT_1579

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction motility
remove
1,635,342 + B158DRAFT_1576 0.35 +0.2
1,635,342 - B158DRAFT_1576 0.35 -0.1
1,635,344 + B158DRAFT_1576 0.36 -0.0
1,635,344 + B158DRAFT_1576 0.36 +0.4
1,635,352 - B158DRAFT_1576 0.37 -0.7
1,635,398 + B158DRAFT_1576 0.48 -2.2
1,635,398 + B158DRAFT_1576 0.48 +0.9
1,635,398 + B158DRAFT_1576 0.48 -2.4
1,635,406 - B158DRAFT_1576 0.49 -3.0
1,635,406 - B158DRAFT_1576 0.49 -0.7
1,635,419 + B158DRAFT_1576 0.52 -3.2
1,635,427 - B158DRAFT_1576 0.54 -2.0
1,635,427 - B158DRAFT_1576 0.54 +1.6
1,635,435 - B158DRAFT_1576 0.56 +0.9
1,635,447 + B158DRAFT_1576 0.58 -1.2
1,635,447 + B158DRAFT_1576 0.58 +2.1
1,635,447 + B158DRAFT_1576 0.58 +1.0
1,635,450 - B158DRAFT_1576 0.59 -2.2
1,635,455 - B158DRAFT_1576 0.60 +4.3
1,635,455 - B158DRAFT_1576 0.60 -0.5
1,635,455 - B158DRAFT_1576 0.60 -0.8
1,635,474 + B158DRAFT_1576 0.64 -0.9
1,635,474 + B158DRAFT_1576 0.64 -0.2
1,635,474 + B158DRAFT_1576 0.64 -0.5
1,635,474 + B158DRAFT_1576 0.64 +1.1
1,635,474 + B158DRAFT_1576 0.64 -0.9
1,635,474 + B158DRAFT_1576 0.64 -0.4
1,635,474 + B158DRAFT_1576 0.64 +0.9
1,635,476 + B158DRAFT_1576 0.65 +0.9
1,635,482 - B158DRAFT_1576 0.66 +0.8
1,635,482 - B158DRAFT_1576 0.66 +0.3
1,635,482 - B158DRAFT_1576 0.66 -2.9
1,635,482 - B158DRAFT_1576 0.66 -0.3
1,635,482 - B158DRAFT_1576 0.66 +0.2
1,635,482 - B158DRAFT_1576 0.66 -1.0
1,635,482 - B158DRAFT_1576 0.66 +0.7
1,635,482 - B158DRAFT_1576 0.66 +2.0
1,635,484 - B158DRAFT_1576 0.67 -2.3
1,635,484 - B158DRAFT_1576 0.67 -1.3
1,635,547 + B158DRAFT_1576 0.81 +1.5
1,635,826 - B158DRAFT_1577 0.32 -1.2
1,635,826 - B158DRAFT_1577 0.32 -1.3
1,635,853 + B158DRAFT_1577 0.68 -0.2
1,635,864 + B158DRAFT_1577 0.82 -2.8
1,635,893 + -0.3
1,635,984 - +0.0
1,636,054 + -1.5
1,636,062 - +0.9
1,636,062 - -2.4
1,636,107 - -1.3
1,636,115 - -2.3
1,636,136 - -3.0
1,636,300 + -1.1
1,636,300 + -2.1
1,636,300 + -1.8
1,636,300 + +4.2
1,636,302 + -0.9
1,636,310 + -1.4
1,636,310 - -0.5
1,636,310 - +0.1
1,636,314 + -1.3
1,636,333 - -2.1
1,636,404 + -1.7
1,636,407 + -3.6
1,636,440 + -1.3
1,636,447 - -1.0
1,636,454 - +0.4
1,636,466 + -1.7
1,636,488 + B158DRAFT_1578 0.11 -3.3
1,636,496 - B158DRAFT_1578 0.11 -1.6
1,636,496 - B158DRAFT_1578 0.11 -0.3
1,636,527 + B158DRAFT_1578 0.13 -2.2
1,636,594 + B158DRAFT_1578 0.16 -2.3
1,636,666 + B158DRAFT_1578 0.20 -2.8
1,636,666 + B158DRAFT_1578 0.20 -1.9
1,636,687 + B158DRAFT_1578 0.21 -1.8
1,636,687 + B158DRAFT_1578 0.21 -2.4
1,636,700 + B158DRAFT_1578 0.22 +0.0
1,636,711 + B158DRAFT_1578 0.22 -2.0
1,636,719 - B158DRAFT_1578 0.23 +0.2
1,636,733 - B158DRAFT_1578 0.24 -2.6
1,636,733 - B158DRAFT_1578 0.24 -2.3
1,636,821 - B158DRAFT_1578 0.28 -2.4
1,636,823 + B158DRAFT_1578 0.28 -1.8
1,636,831 - B158DRAFT_1578 0.29 -2.1
1,636,831 - B158DRAFT_1578 0.29 -1.8
1,636,841 + B158DRAFT_1578 0.29 -3.4
1,636,849 - B158DRAFT_1578 0.30 -2.0
1,636,849 - B158DRAFT_1578 0.30 -3.5
1,636,893 + B158DRAFT_1578 0.32 -1.8
1,636,960 - B158DRAFT_1578 0.36 -2.0
1,637,025 + B158DRAFT_1578 0.39 -2.8
1,637,032 + B158DRAFT_1578 0.40 -1.7
1,637,040 - B158DRAFT_1578 0.40 -3.1
1,637,101 + B158DRAFT_1578 0.43 -0.8
1,637,181 - B158DRAFT_1578 0.47 -1.7
1,637,275 + B158DRAFT_1578 0.53 -3.0
1,637,316 + B158DRAFT_1578 0.55 -2.2
1,637,330 + B158DRAFT_1578 0.55 -1.3
1,637,419 + B158DRAFT_1578 0.60 -2.5
1,637,474 - B158DRAFT_1578 0.63 -2.1
1,637,498 - B158DRAFT_1578 0.64 -2.7
1,637,508 + B158DRAFT_1578 0.65 -3.1
1,637,528 + B158DRAFT_1578 0.66 -0.9
1,637,528 + B158DRAFT_1578 0.66 +5.5
1,637,547 + B158DRAFT_1578 0.67 -2.2
1,637,547 + B158DRAFT_1578 0.67 -2.5
1,637,547 + B158DRAFT_1578 0.67 -2.1
1,637,547 + B158DRAFT_1578 0.67 -2.5
1,637,555 - B158DRAFT_1578 0.67 -2.9
1,637,555 - B158DRAFT_1578 0.67 +0.3
1,637,578 + B158DRAFT_1578 0.69 -2.8
1,637,586 - B158DRAFT_1578 0.69 -2.8
1,637,586 - B158DRAFT_1578 0.69 -2.4
1,637,594 + B158DRAFT_1578 0.69 -2.6
1,637,594 + B158DRAFT_1578 0.69 -2.3
1,637,602 - B158DRAFT_1578 0.70 -3.0
1,637,602 - B158DRAFT_1578 0.70 -1.6
1,637,627 + B158DRAFT_1578 0.71 -2.1
1,637,627 + B158DRAFT_1578 0.71 -0.9
1,637,635 - B158DRAFT_1578 0.72 -3.4
1,637,635 - B158DRAFT_1578 0.72 -1.9
1,637,658 - B158DRAFT_1578 0.73 -1.8
1,637,671 - B158DRAFT_1578 0.74 -3.4
1,637,691 + B158DRAFT_1578 0.75 -1.3
1,637,691 + B158DRAFT_1578 0.75 -1.5
1,637,696 + B158DRAFT_1578 0.75 +0.2
1,637,699 - B158DRAFT_1578 0.75 -3.7
1,637,833 + B158DRAFT_1578 0.82 -2.7
1,637,833 + B158DRAFT_1578 0.82 -2.3
1,637,833 + B158DRAFT_1578 0.82 -1.7
1,637,841 - B158DRAFT_1578 0.83 -2.7
1,637,841 - B158DRAFT_1578 0.83 -2.8
1,637,841 - B158DRAFT_1578 0.83 -2.9
1,637,841 - B158DRAFT_1578 0.83 -3.0
1,637,874 + B158DRAFT_1578 0.84 -2.0
1,637,908 + B158DRAFT_1578 0.86 -0.3
1,637,915 + B158DRAFT_1578 0.87 -1.0
1,637,916 - B158DRAFT_1578 0.87 -2.7
1,637,923 - B158DRAFT_1578 0.87 -3.1
1,637,947 + B158DRAFT_1578 0.88 -1.7
1,638,001 - -0.7
1,638,006 - -0.6
1,638,010 + -3.2
1,638,018 - -2.9
1,638,025 + -0.9
1,638,025 + -1.2
1,638,025 + -2.2
1,638,025 + -1.5
1,638,025 + -2.3
1,638,025 + -0.3
1,638,025 + -1.7
1,638,033 - -2.4
1,638,033 - -1.8
1,638,033 - -4.1
1,638,033 - +0.4
1,638,033 - -1.4
1,638,087 + -1.5
1,638,235 - -2.7
1,638,235 - +0.4
1,638,337 + -0.5
1,638,360 - -2.8
1,638,360 - -0.6
1,638,401 + +0.5
1,638,419 - +0.1
1,638,460 - -1.0
1,638,474 + -1.5
1,638,474 - +2.1
1,638,489 + -0.5
1,638,549 + -1.3
1,638,559 + -2.1
1,638,623 - B158DRAFT_1579 0.11 -1.4
1,638,625 + B158DRAFT_1579 0.11 -1.9
1,638,625 + B158DRAFT_1579 0.11 +0.4
1,638,633 - B158DRAFT_1579 0.11 -1.5
1,638,643 + B158DRAFT_1579 0.12 -0.3
1,638,651 - B158DRAFT_1579 0.12 +0.6
1,638,671 + B158DRAFT_1579 0.13 -0.6
1,638,796 - B158DRAFT_1579 0.19 -0.7
1,638,866 + B158DRAFT_1579 0.23 +2.9
1,638,886 - B158DRAFT_1579 0.24 -2.8
1,638,937 + B158DRAFT_1579 0.26 -2.8
1,638,942 + B158DRAFT_1579 0.27 -0.0
1,638,945 - B158DRAFT_1579 0.27 -0.5
1,638,955 - B158DRAFT_1579 0.27 -0.1
1,638,963 - B158DRAFT_1579 0.28 +0.0
1,639,095 - B158DRAFT_1579 0.34 -1.5

Or see this region's nucleotide sequence