Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1499 and B158DRAFT_1500 are separated by 125 nucleotides B158DRAFT_1500 and B158DRAFT_1501 are separated by 46 nucleotides B158DRAFT_1501 and B158DRAFT_1502 are separated by 162 nucleotides B158DRAFT_1502 and B158DRAFT_1503 are separated by 62 nucleotides
B158DRAFT_1499: B158DRAFT_1499 - Uncharacterized conserved protein, at 1,556,792 to 1,557,385
_1499
B158DRAFT_1500: B158DRAFT_1500 - Uncharacterized conserved protein, at 1,557,511 to 1,557,849
_1500
B158DRAFT_1501: B158DRAFT_1501 - TIGR00645 family protein, at 1,557,896 to 1,558,420
_1501
B158DRAFT_1502: B158DRAFT_1502 - Phosphohistidine phosphatase SixA, at 1,558,583 to 1,559,119
_1502
B158DRAFT_1503: B158DRAFT_1503 - hypothetical protein, at 1,559,182 to 1,559,763
_1503
Position (kb)
1557
1558
1559 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1556.902 kb on + strand, within B158DRAFT_1499 at 1556.902 kb on + strand, within B158DRAFT_1499 at 1556.910 kb on - strand, within B158DRAFT_1499 at 1556.910 kb on - strand, within B158DRAFT_1499 at 1556.910 kb on - strand, within B158DRAFT_1499 at 1556.910 kb on - strand, within B158DRAFT_1499 at 1556.910 kb on - strand, within B158DRAFT_1499 at 1556.910 kb on - strand, within B158DRAFT_1499 at 1556.933 kb on - strand, within B158DRAFT_1499 at 1557.028 kb on + strand, within B158DRAFT_1499 at 1557.113 kb on + strand, within B158DRAFT_1499 at 1557.113 kb on + strand, within B158DRAFT_1499 at 1557.128 kb on + strand, within B158DRAFT_1499 at 1557.134 kb on - strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.143 kb on + strand, within B158DRAFT_1499 at 1557.148 kb on + strand, within B158DRAFT_1499 at 1557.151 kb on - strand, within B158DRAFT_1499 at 1557.151 kb on - strand, within B158DRAFT_1499 at 1557.151 kb on - strand, within B158DRAFT_1499 at 1557.151 kb on - strand, within B158DRAFT_1499 at 1557.151 kb on - strand, within B158DRAFT_1499 at 1557.156 kb on - strand, within B158DRAFT_1499 at 1557.163 kb on + strand, within B158DRAFT_1499 at 1557.175 kb on + strand, within B158DRAFT_1499 at 1557.230 kb on - strand, within B158DRAFT_1499 at 1557.265 kb on - strand, within B158DRAFT_1499 at 1557.265 kb on - strand, within B158DRAFT_1499 at 1557.331 kb on + strand at 1557.339 kb on - strand at 1557.341 kb on + strand at 1557.341 kb on + strand at 1557.346 kb on + strand at 1557.346 kb on + strand at 1557.346 kb on + strand at 1557.346 kb on + strand at 1557.349 kb on - strand at 1557.349 kb on - strand at 1557.349 kb on - strand at 1557.349 kb on - strand at 1557.354 kb on - strand at 1557.439 kb on + strand at 1557.473 kb on + strand at 1557.473 kb on + strand at 1557.481 kb on - strand at 1557.481 kb on - strand at 1557.495 kb on + strand at 1557.500 kb on + strand at 1557.503 kb on - strand at 1557.560 kb on - strand, within B158DRAFT_1500 at 1557.599 kb on + strand, within B158DRAFT_1500 at 1557.603 kb on + strand, within B158DRAFT_1500 at 1557.607 kb on - strand, within B158DRAFT_1500 at 1557.716 kb on + strand, within B158DRAFT_1500 at 1557.775 kb on + strand, within B158DRAFT_1500 at 1557.844 kb on + strand at 1557.844 kb on + strand at 1557.852 kb on - strand at 1557.860 kb on - strand at 1558.139 kb on - strand, within B158DRAFT_1501 at 1558.139 kb on - strand, within B158DRAFT_1501 at 1558.295 kb on + strand, within B158DRAFT_1501 at 1558.579 kb on + strand at 1558.752 kb on + strand, within B158DRAFT_1502 at 1558.752 kb on + strand, within B158DRAFT_1502 at 1558.791 kb on - strand, within B158DRAFT_1502 at 1558.809 kb on + strand, within B158DRAFT_1502 at 1558.893 kb on + strand, within B158DRAFT_1502 at 1558.893 kb on + strand, within B158DRAFT_1502 at 1558.901 kb on - strand, within B158DRAFT_1502 at 1558.901 kb on - strand, within B158DRAFT_1502 at 1558.927 kb on - strand, within B158DRAFT_1502 at 1558.962 kb on + strand, within B158DRAFT_1502 at 1558.962 kb on + strand, within B158DRAFT_1502 at 1558.970 kb on - strand, within B158DRAFT_1502 at 1558.992 kb on - strand, within B158DRAFT_1502 at 1559.014 kb on + strand, within B158DRAFT_1502 at 1559.048 kb on + strand, within B158DRAFT_1502 at 1559.122 kb on + strand at 1559.130 kb on - strand at 1559.282 kb on + strand, within B158DRAFT_1503 at 1559.282 kb on + strand, within B158DRAFT_1503 at 1559.290 kb on - strand, within B158DRAFT_1503 at 1559.290 kb on - strand, within B158DRAFT_1503 at 1559.320 kb on + strand, within B158DRAFT_1503 at 1559.350 kb on + strand, within B158DRAFT_1503 at 1559.358 kb on - strand, within B158DRAFT_1503 at 1559.358 kb on - strand, within B158DRAFT_1503 at 1559.376 kb on + strand, within B158DRAFT_1503 at 1559.389 kb on - strand, within B158DRAFT_1503 at 1559.403 kb on - strand, within B158DRAFT_1503
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,556,902 + B158DRAFT_1499 0.19 -0.2 1,556,902 + B158DRAFT_1499 0.19 -0.5 1,556,910 - B158DRAFT_1499 0.20 -0.2 1,556,910 - B158DRAFT_1499 0.20 +0.9 1,556,910 - B158DRAFT_1499 0.20 -0.4 1,556,910 - B158DRAFT_1499 0.20 +1.1 1,556,910 - B158DRAFT_1499 0.20 +0.3 1,556,910 - B158DRAFT_1499 0.20 +0.9 1,556,933 - B158DRAFT_1499 0.24 -1.1 1,557,028 + B158DRAFT_1499 0.40 +0.4 1,557,113 + B158DRAFT_1499 0.54 -1.0 1,557,113 + B158DRAFT_1499 0.54 -0.6 1,557,128 + B158DRAFT_1499 0.57 -0.8 1,557,134 - B158DRAFT_1499 0.58 +0.2 1,557,143 + B158DRAFT_1499 0.59 -0.8 1,557,143 + B158DRAFT_1499 0.59 -1.6 1,557,143 + B158DRAFT_1499 0.59 +0.6 1,557,143 + B158DRAFT_1499 0.59 -0.7 1,557,143 + B158DRAFT_1499 0.59 +3.9 1,557,143 + B158DRAFT_1499 0.59 +1.3 1,557,143 + B158DRAFT_1499 0.59 -0.8 1,557,143 + B158DRAFT_1499 0.59 +1.1 1,557,143 + B158DRAFT_1499 0.59 +0.3 1,557,143 + B158DRAFT_1499 0.59 +0.3 1,557,143 + B158DRAFT_1499 0.59 -1.7 1,557,143 + B158DRAFT_1499 0.59 -2.6 1,557,148 + B158DRAFT_1499 0.60 -0.4 1,557,151 - B158DRAFT_1499 0.60 +0.5 1,557,151 - B158DRAFT_1499 0.60 -2.0 1,557,151 - B158DRAFT_1499 0.60 -1.5 1,557,151 - B158DRAFT_1499 0.60 -0.2 1,557,151 - B158DRAFT_1499 0.60 +1.8 1,557,156 - B158DRAFT_1499 0.61 +0.8 1,557,163 + B158DRAFT_1499 0.62 -1.3 1,557,175 + B158DRAFT_1499 0.64 -0.1 1,557,230 - B158DRAFT_1499 0.74 +1.2 1,557,265 - B158DRAFT_1499 0.80 -0.4 1,557,265 - B158DRAFT_1499 0.80 -0.7 1,557,331 + +0.5 1,557,339 - -0.8 1,557,341 + -0.2 1,557,341 + +0.9 1,557,346 + -1.7 1,557,346 + -0.4 1,557,346 + -0.1 1,557,346 + +1.2 1,557,349 - -0.8 1,557,349 - -1.4 1,557,349 - -0.6 1,557,349 - +0.2 1,557,354 - +2.2 1,557,439 + +0.9 1,557,473 + -0.0 1,557,473 + -0.6 1,557,481 - -0.1 1,557,481 - -0.4 1,557,495 + -1.1 1,557,500 + -1.2 1,557,503 - -1.6 1,557,560 - B158DRAFT_1500 0.14 -1.4 1,557,599 + B158DRAFT_1500 0.26 -1.4 1,557,603 + B158DRAFT_1500 0.27 +1.2 1,557,607 - B158DRAFT_1500 0.28 -0.6 1,557,716 + B158DRAFT_1500 0.60 -1.5 1,557,775 + B158DRAFT_1500 0.78 -0.8 1,557,844 + -0.6 1,557,844 + -0.0 1,557,852 - +0.6 1,557,860 - +0.8 1,558,139 - B158DRAFT_1501 0.46 -0.7 1,558,139 - B158DRAFT_1501 0.46 +1.5 1,558,295 + B158DRAFT_1501 0.76 -0.1 1,558,579 + +2.8 1,558,752 + B158DRAFT_1502 0.31 -1.5 1,558,752 + B158DRAFT_1502 0.31 -1.3 1,558,791 - B158DRAFT_1502 0.39 +0.0 1,558,809 + B158DRAFT_1502 0.42 +0.9 1,558,893 + B158DRAFT_1502 0.58 +1.0 1,558,893 + B158DRAFT_1502 0.58 -0.9 1,558,901 - B158DRAFT_1502 0.59 +0.2 1,558,901 - B158DRAFT_1502 0.59 +2.5 1,558,927 - B158DRAFT_1502 0.64 -1.6 1,558,962 + B158DRAFT_1502 0.71 +0.5 1,558,962 + B158DRAFT_1502 0.71 +1.1 1,558,970 - B158DRAFT_1502 0.72 -2.3 1,558,992 - B158DRAFT_1502 0.76 +1.6 1,559,014 + B158DRAFT_1502 0.80 -1.0 1,559,048 + B158DRAFT_1502 0.87 -0.8 1,559,122 + -0.0 1,559,130 - +0.3 1,559,282 + B158DRAFT_1503 0.17 +0.1 1,559,282 + B158DRAFT_1503 0.17 -2.3 1,559,290 - B158DRAFT_1503 0.19 +1.2 1,559,290 - B158DRAFT_1503 0.19 +0.7 1,559,320 + B158DRAFT_1503 0.24 +1.5 1,559,350 + B158DRAFT_1503 0.29 -0.9 1,559,358 - B158DRAFT_1503 0.30 +0.4 1,559,358 - B158DRAFT_1503 0.30 +1.2 1,559,376 + B158DRAFT_1503 0.33 -0.6 1,559,389 - B158DRAFT_1503 0.36 -1.6 1,559,403 - B158DRAFT_1503 0.38 +0.2
Or see this region's nucleotide sequence