Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1500

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1498 and B158DRAFT_1499 are separated by 31 nucleotidesB158DRAFT_1499 and B158DRAFT_1500 are separated by 125 nucleotidesB158DRAFT_1500 and B158DRAFT_1501 are separated by 46 nucleotidesB158DRAFT_1501 and B158DRAFT_1502 are separated by 162 nucleotides B158DRAFT_1498: B158DRAFT_1498 - methionine-S-sulfoxide reductase, at 1,556,194 to 1,556,760 _1498 B158DRAFT_1499: B158DRAFT_1499 - Uncharacterized conserved protein, at 1,556,792 to 1,557,385 _1499 B158DRAFT_1500: B158DRAFT_1500 - Uncharacterized conserved protein, at 1,557,511 to 1,557,849 _1500 B158DRAFT_1501: B158DRAFT_1501 - TIGR00645 family protein, at 1,557,896 to 1,558,420 _1501 B158DRAFT_1502: B158DRAFT_1502 - Phosphohistidine phosphatase SixA, at 1,558,583 to 1,559,119 _1502 Position (kb) 1557 1558Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1556.516 kb on - strand, within B158DRAFT_1498at 1556.516 kb on - strand, within B158DRAFT_1498at 1556.523 kb on - strand, within B158DRAFT_1498at 1556.554 kb on - strand, within B158DRAFT_1498at 1556.655 kb on - strand, within B158DRAFT_1498at 1556.655 kb on - strand, within B158DRAFT_1498at 1556.708 kb on + strandat 1556.777 kb on + strandat 1556.785 kb on - strandat 1556.785 kb on - strandat 1556.785 kb on - strandat 1556.800 kb on + strandat 1556.800 kb on + strandat 1556.800 kb on + strandat 1556.800 kb on + strandat 1556.808 kb on - strandat 1556.808 kb on - strandat 1556.808 kb on - strandat 1556.808 kb on - strandat 1556.808 kb on - strandat 1556.808 kb on - strandat 1556.864 kb on + strand, within B158DRAFT_1499at 1556.902 kb on + strand, within B158DRAFT_1499at 1556.902 kb on + strand, within B158DRAFT_1499at 1556.910 kb on - strand, within B158DRAFT_1499at 1556.910 kb on - strand, within B158DRAFT_1499at 1556.910 kb on - strand, within B158DRAFT_1499at 1556.910 kb on - strand, within B158DRAFT_1499at 1556.910 kb on - strand, within B158DRAFT_1499at 1556.910 kb on - strand, within B158DRAFT_1499at 1556.933 kb on - strand, within B158DRAFT_1499at 1557.028 kb on + strand, within B158DRAFT_1499at 1557.113 kb on + strand, within B158DRAFT_1499at 1557.113 kb on + strand, within B158DRAFT_1499at 1557.128 kb on + strand, within B158DRAFT_1499at 1557.134 kb on - strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.143 kb on + strand, within B158DRAFT_1499at 1557.148 kb on + strand, within B158DRAFT_1499at 1557.151 kb on - strand, within B158DRAFT_1499at 1557.151 kb on - strand, within B158DRAFT_1499at 1557.151 kb on - strand, within B158DRAFT_1499at 1557.151 kb on - strand, within B158DRAFT_1499at 1557.151 kb on - strand, within B158DRAFT_1499at 1557.156 kb on - strand, within B158DRAFT_1499at 1557.163 kb on + strand, within B158DRAFT_1499at 1557.175 kb on + strand, within B158DRAFT_1499at 1557.230 kb on - strand, within B158DRAFT_1499at 1557.265 kb on - strand, within B158DRAFT_1499at 1557.265 kb on - strand, within B158DRAFT_1499at 1557.331 kb on + strandat 1557.339 kb on - strandat 1557.341 kb on + strandat 1557.341 kb on + strandat 1557.346 kb on + strandat 1557.346 kb on + strandat 1557.346 kb on + strandat 1557.346 kb on + strandat 1557.349 kb on - strandat 1557.349 kb on - strandat 1557.349 kb on - strandat 1557.349 kb on - strandat 1557.354 kb on - strandat 1557.439 kb on + strandat 1557.473 kb on + strandat 1557.473 kb on + strandat 1557.481 kb on - strandat 1557.481 kb on - strandat 1557.495 kb on + strandat 1557.500 kb on + strandat 1557.503 kb on - strandat 1557.560 kb on - strand, within B158DRAFT_1500at 1557.599 kb on + strand, within B158DRAFT_1500at 1557.603 kb on + strand, within B158DRAFT_1500at 1557.607 kb on - strand, within B158DRAFT_1500at 1557.716 kb on + strand, within B158DRAFT_1500at 1557.775 kb on + strand, within B158DRAFT_1500at 1557.844 kb on + strandat 1557.844 kb on + strandat 1557.852 kb on - strandat 1557.860 kb on - strandat 1558.139 kb on - strand, within B158DRAFT_1501at 1558.139 kb on - strand, within B158DRAFT_1501at 1558.295 kb on + strand, within B158DRAFT_1501at 1558.579 kb on + strandat 1558.752 kb on + strand, within B158DRAFT_1502at 1558.752 kb on + strand, within B158DRAFT_1502at 1558.791 kb on - strand, within B158DRAFT_1502at 1558.809 kb on + strand, within B158DRAFT_1502

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,556,516 - B158DRAFT_1498 0.57 -1.1
1,556,516 - B158DRAFT_1498 0.57 -2.7
1,556,523 - B158DRAFT_1498 0.58 +0.5
1,556,554 - B158DRAFT_1498 0.63 +1.5
1,556,655 - B158DRAFT_1498 0.81 -2.0
1,556,655 - B158DRAFT_1498 0.81 -0.5
1,556,708 + -1.1
1,556,777 + -1.0
1,556,785 - -0.5
1,556,785 - -0.0
1,556,785 - -1.6
1,556,800 + -1.7
1,556,800 + -0.2
1,556,800 + -0.5
1,556,800 + -0.5
1,556,808 - +0.3
1,556,808 - -1.2
1,556,808 - +1.5
1,556,808 - -1.7
1,556,808 - -0.0
1,556,808 - -1.6
1,556,864 + B158DRAFT_1499 0.12 -2.8
1,556,902 + B158DRAFT_1499 0.19 -0.2
1,556,902 + B158DRAFT_1499 0.19 -0.5
1,556,910 - B158DRAFT_1499 0.20 -0.2
1,556,910 - B158DRAFT_1499 0.20 +0.9
1,556,910 - B158DRAFT_1499 0.20 -0.4
1,556,910 - B158DRAFT_1499 0.20 +1.1
1,556,910 - B158DRAFT_1499 0.20 +0.3
1,556,910 - B158DRAFT_1499 0.20 +0.9
1,556,933 - B158DRAFT_1499 0.24 -1.1
1,557,028 + B158DRAFT_1499 0.40 +0.4
1,557,113 + B158DRAFT_1499 0.54 -1.0
1,557,113 + B158DRAFT_1499 0.54 -0.6
1,557,128 + B158DRAFT_1499 0.57 -0.8
1,557,134 - B158DRAFT_1499 0.58 +0.2
1,557,143 + B158DRAFT_1499 0.59 -0.8
1,557,143 + B158DRAFT_1499 0.59 -1.6
1,557,143 + B158DRAFT_1499 0.59 +0.6
1,557,143 + B158DRAFT_1499 0.59 -0.7
1,557,143 + B158DRAFT_1499 0.59 +3.9
1,557,143 + B158DRAFT_1499 0.59 +1.3
1,557,143 + B158DRAFT_1499 0.59 -0.8
1,557,143 + B158DRAFT_1499 0.59 +1.1
1,557,143 + B158DRAFT_1499 0.59 +0.3
1,557,143 + B158DRAFT_1499 0.59 +0.3
1,557,143 + B158DRAFT_1499 0.59 -1.7
1,557,143 + B158DRAFT_1499 0.59 -2.6
1,557,148 + B158DRAFT_1499 0.60 -0.4
1,557,151 - B158DRAFT_1499 0.60 +0.5
1,557,151 - B158DRAFT_1499 0.60 -2.0
1,557,151 - B158DRAFT_1499 0.60 -1.5
1,557,151 - B158DRAFT_1499 0.60 -0.2
1,557,151 - B158DRAFT_1499 0.60 +1.8
1,557,156 - B158DRAFT_1499 0.61 +0.8
1,557,163 + B158DRAFT_1499 0.62 -1.3
1,557,175 + B158DRAFT_1499 0.64 -0.1
1,557,230 - B158DRAFT_1499 0.74 +1.2
1,557,265 - B158DRAFT_1499 0.80 -0.4
1,557,265 - B158DRAFT_1499 0.80 -0.7
1,557,331 + +0.5
1,557,339 - -0.8
1,557,341 + -0.2
1,557,341 + +0.9
1,557,346 + -1.7
1,557,346 + -0.4
1,557,346 + -0.1
1,557,346 + +1.2
1,557,349 - -0.8
1,557,349 - -1.4
1,557,349 - -0.6
1,557,349 - +0.2
1,557,354 - +2.2
1,557,439 + +0.9
1,557,473 + -0.0
1,557,473 + -0.6
1,557,481 - -0.1
1,557,481 - -0.4
1,557,495 + -1.1
1,557,500 + -1.2
1,557,503 - -1.6
1,557,560 - B158DRAFT_1500 0.14 -1.4
1,557,599 + B158DRAFT_1500 0.26 -1.4
1,557,603 + B158DRAFT_1500 0.27 +1.2
1,557,607 - B158DRAFT_1500 0.28 -0.6
1,557,716 + B158DRAFT_1500 0.60 -1.5
1,557,775 + B158DRAFT_1500 0.78 -0.8
1,557,844 + -0.6
1,557,844 + -0.0
1,557,852 - +0.6
1,557,860 - +0.8
1,558,139 - B158DRAFT_1501 0.46 -0.7
1,558,139 - B158DRAFT_1501 0.46 +1.5
1,558,295 + B158DRAFT_1501 0.76 -0.1
1,558,579 + +2.8
1,558,752 + B158DRAFT_1502 0.31 -1.5
1,558,752 + B158DRAFT_1502 0.31 -1.3
1,558,791 - B158DRAFT_1502 0.39 +0.0
1,558,809 + B158DRAFT_1502 0.42 +0.9

Or see this region's nucleotide sequence