Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1412

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1410 and B158DRAFT_1411 are separated by 232 nucleotidesB158DRAFT_1411 and B158DRAFT_1412 are separated by 223 nucleotidesB158DRAFT_1412 and B158DRAFT_1413 are separated by 42 nucleotidesB158DRAFT_1413 and B158DRAFT_1414 are separated by 105 nucleotides B158DRAFT_1410: B158DRAFT_1410 - tRNA_Glu_TTC, at 1,459,506 to 1,459,581 _1410 B158DRAFT_1411: B158DRAFT_1411 - hypothetical protein, at 1,459,814 to 1,460,017 _1411 B158DRAFT_1412: B158DRAFT_1412 - Nitroreductase, at 1,460,241 to 1,460,822 _1412 B158DRAFT_1413: B158DRAFT_1413 - hypothetical protein, at 1,460,865 to 1,461,041 _1413 B158DRAFT_1414: B158DRAFT_1414 - asparaginyl-tRNA synthetase (EC 6.1.1.22), at 1,461,147 to 1,462,544 _1414 Position (kb) 1460 1461Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 1459.298 kb on + strandat 1459.327 kb on - strandat 1459.327 kb on - strandat 1459.651 kb on - strandat 1459.652 kb on - strandat 1459.653 kb on - strandat 1459.716 kb on + strandat 1459.716 kb on + strandat 1459.716 kb on + strandat 1459.716 kb on + strandat 1459.716 kb on + strandat 1459.716 kb on + strandat 1459.721 kb on + strandat 1459.724 kb on - strandat 1459.724 kb on - strandat 1459.724 kb on - strandat 1459.745 kb on + strandat 1459.753 kb on - strandat 1459.819 kb on - strandat 1459.819 kb on - strandat 1459.824 kb on - strandat 1459.915 kb on - strand, within B158DRAFT_1411at 1459.982 kb on + strand, within B158DRAFT_1411at 1459.982 kb on + strand, within B158DRAFT_1411at 1460.046 kb on - strandat 1460.068 kb on + strandat 1460.260 kb on + strandat 1460.260 kb on + strandat 1460.268 kb on - strandat 1460.268 kb on - strandat 1460.268 kb on - strandat 1460.271 kb on + strandat 1460.307 kb on + strand, within B158DRAFT_1412at 1460.307 kb on + strand, within B158DRAFT_1412at 1460.351 kb on + strand, within B158DRAFT_1412at 1460.359 kb on - strand, within B158DRAFT_1412at 1460.359 kb on - strand, within B158DRAFT_1412at 1460.369 kb on - strand, within B158DRAFT_1412at 1460.387 kb on + strand, within B158DRAFT_1412at 1460.393 kb on - strand, within B158DRAFT_1412at 1460.395 kb on - strand, within B158DRAFT_1412at 1460.428 kb on - strand, within B158DRAFT_1412at 1460.475 kb on - strand, within B158DRAFT_1412at 1460.477 kb on + strand, within B158DRAFT_1412at 1460.485 kb on - strand, within B158DRAFT_1412at 1460.513 kb on + strand, within B158DRAFT_1412at 1460.515 kb on + strand, within B158DRAFT_1412at 1460.532 kb on + strand, within B158DRAFT_1412at 1460.532 kb on + strand, within B158DRAFT_1412at 1460.532 kb on + strand, within B158DRAFT_1412at 1460.539 kb on - strand, within B158DRAFT_1412at 1460.540 kb on - strand, within B158DRAFT_1412at 1460.558 kb on + strand, within B158DRAFT_1412at 1460.558 kb on + strand, within B158DRAFT_1412at 1460.558 kb on + strand, within B158DRAFT_1412at 1460.558 kb on + strand, within B158DRAFT_1412at 1460.566 kb on - strand, within B158DRAFT_1412at 1460.566 kb on - strand, within B158DRAFT_1412at 1460.566 kb on - strand, within B158DRAFT_1412at 1460.566 kb on - strand, within B158DRAFT_1412at 1460.566 kb on - strand, within B158DRAFT_1412at 1460.566 kb on - strand, within B158DRAFT_1412at 1460.567 kb on - strand, within B158DRAFT_1412at 1460.644 kb on + strand, within B158DRAFT_1412at 1460.663 kb on + strand, within B158DRAFT_1412at 1460.721 kb on - strand, within B158DRAFT_1412at 1460.757 kb on - strand, within B158DRAFT_1412at 1460.796 kb on + strandat 1460.863 kb on + strandat 1460.863 kb on + strandat 1460.871 kb on - strandat 1460.974 kb on + strand, within B158DRAFT_1413at 1460.996 kb on + strand, within B158DRAFT_1413at 1461.030 kb on - strandat 1461.117 kb on + strandat 1461.123 kb on - strandat 1461.125 kb on - strandat 1461.125 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,459,298 + -1.1
1,459,327 - -3.4
1,459,327 - -0.4
1,459,651 - -1.2
1,459,652 - -1.5
1,459,653 - +2.7
1,459,716 + -1.5
1,459,716 + -1.2
1,459,716 + -0.5
1,459,716 + -0.2
1,459,716 + -0.8
1,459,716 + -0.3
1,459,721 + -0.8
1,459,724 - -1.4
1,459,724 - -0.4
1,459,724 - +2.9
1,459,745 + -0.4
1,459,753 - -2.6
1,459,819 - +0.5
1,459,819 - -0.4
1,459,824 - -2.0
1,459,915 - B158DRAFT_1411 0.50 -1.7
1,459,982 + B158DRAFT_1411 0.82 -0.3
1,459,982 + B158DRAFT_1411 0.82 -1.0
1,460,046 - -0.2
1,460,068 + +0.9
1,460,260 + +0.7
1,460,260 + +1.3
1,460,268 - +0.5
1,460,268 - +1.7
1,460,268 - +0.4
1,460,271 + -3.1
1,460,307 + B158DRAFT_1412 0.11 -1.9
1,460,307 + B158DRAFT_1412 0.11 +0.2
1,460,351 + B158DRAFT_1412 0.19 +3.1
1,460,359 - B158DRAFT_1412 0.20 +1.0
1,460,359 - B158DRAFT_1412 0.20 +0.8
1,460,369 - B158DRAFT_1412 0.22 +0.0
1,460,387 + B158DRAFT_1412 0.25 +0.4
1,460,393 - B158DRAFT_1412 0.26 +0.4
1,460,395 - B158DRAFT_1412 0.26 +4.6
1,460,428 - B158DRAFT_1412 0.32 +0.5
1,460,475 - B158DRAFT_1412 0.40 -2.1
1,460,477 + B158DRAFT_1412 0.41 -0.4
1,460,485 - B158DRAFT_1412 0.42 +1.2
1,460,513 + B158DRAFT_1412 0.47 -0.2
1,460,515 + B158DRAFT_1412 0.47 +1.3
1,460,532 + B158DRAFT_1412 0.50 +1.6
1,460,532 + B158DRAFT_1412 0.50 -0.7
1,460,532 + B158DRAFT_1412 0.50 -1.5
1,460,539 - B158DRAFT_1412 0.51 +0.6
1,460,540 - B158DRAFT_1412 0.51 -0.2
1,460,558 + B158DRAFT_1412 0.54 -0.4
1,460,558 + B158DRAFT_1412 0.54 -0.3
1,460,558 + B158DRAFT_1412 0.54 -1.8
1,460,558 + B158DRAFT_1412 0.54 -1.7
1,460,566 - B158DRAFT_1412 0.56 -0.2
1,460,566 - B158DRAFT_1412 0.56 +1.3
1,460,566 - B158DRAFT_1412 0.56 -2.6
1,460,566 - B158DRAFT_1412 0.56 +4.3
1,460,566 - B158DRAFT_1412 0.56 -0.2
1,460,566 - B158DRAFT_1412 0.56 +0.7
1,460,567 - B158DRAFT_1412 0.56 -0.4
1,460,644 + B158DRAFT_1412 0.69 +0.6
1,460,663 + B158DRAFT_1412 0.73 -0.6
1,460,721 - B158DRAFT_1412 0.82 -0.3
1,460,757 - B158DRAFT_1412 0.89 +0.6
1,460,796 + +1.2
1,460,863 + -0.3
1,460,863 + +0.7
1,460,871 - -2.0
1,460,974 + B158DRAFT_1413 0.62 -0.6
1,460,996 + B158DRAFT_1413 0.74 -0.5
1,461,030 - +3.8
1,461,117 + +0.7
1,461,123 - -0.7
1,461,125 - +0.1
1,461,125 - +0.6

Or see this region's nucleotide sequence