Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1410 and B158DRAFT_1411 are separated by 232 nucleotides B158DRAFT_1411 and B158DRAFT_1412 are separated by 223 nucleotides B158DRAFT_1412 and B158DRAFT_1413 are separated by 42 nucleotides B158DRAFT_1413 and B158DRAFT_1414 are separated by 105 nucleotides
B158DRAFT_1410: B158DRAFT_1410 - tRNA_Glu_TTC, at 1,459,506 to 1,459,581
_1410
B158DRAFT_1411: B158DRAFT_1411 - hypothetical protein, at 1,459,814 to 1,460,017
_1411
B158DRAFT_1412: B158DRAFT_1412 - Nitroreductase, at 1,460,241 to 1,460,822
_1412
B158DRAFT_1413: B158DRAFT_1413 - hypothetical protein, at 1,460,865 to 1,461,041
_1413
B158DRAFT_1414: B158DRAFT_1414 - asparaginyl-tRNA synthetase (EC 6.1.1.22), at 1,461,147 to 1,462,544
_1414
Position (kb)
1460
1461 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1459.298 kb on + strand at 1459.327 kb on - strand at 1459.327 kb on - strand at 1459.651 kb on - strand at 1459.652 kb on - strand at 1459.653 kb on - strand at 1459.716 kb on + strand at 1459.716 kb on + strand at 1459.716 kb on + strand at 1459.716 kb on + strand at 1459.716 kb on + strand at 1459.716 kb on + strand at 1459.721 kb on + strand at 1459.724 kb on - strand at 1459.724 kb on - strand at 1459.724 kb on - strand at 1459.745 kb on + strand at 1459.753 kb on - strand at 1459.819 kb on - strand at 1459.819 kb on - strand at 1459.824 kb on - strand at 1459.915 kb on - strand, within B158DRAFT_1411 at 1459.982 kb on + strand, within B158DRAFT_1411 at 1459.982 kb on + strand, within B158DRAFT_1411 at 1460.046 kb on - strand at 1460.068 kb on + strand at 1460.260 kb on + strand at 1460.260 kb on + strand at 1460.268 kb on - strand at 1460.268 kb on - strand at 1460.268 kb on - strand at 1460.271 kb on + strand at 1460.307 kb on + strand, within B158DRAFT_1412 at 1460.307 kb on + strand, within B158DRAFT_1412 at 1460.351 kb on + strand, within B158DRAFT_1412 at 1460.359 kb on - strand, within B158DRAFT_1412 at 1460.359 kb on - strand, within B158DRAFT_1412 at 1460.369 kb on - strand, within B158DRAFT_1412 at 1460.387 kb on + strand, within B158DRAFT_1412 at 1460.393 kb on - strand, within B158DRAFT_1412 at 1460.395 kb on - strand, within B158DRAFT_1412 at 1460.428 kb on - strand, within B158DRAFT_1412 at 1460.475 kb on - strand, within B158DRAFT_1412 at 1460.477 kb on + strand, within B158DRAFT_1412 at 1460.485 kb on - strand, within B158DRAFT_1412 at 1460.513 kb on + strand, within B158DRAFT_1412 at 1460.515 kb on + strand, within B158DRAFT_1412 at 1460.532 kb on + strand, within B158DRAFT_1412 at 1460.532 kb on + strand, within B158DRAFT_1412 at 1460.532 kb on + strand, within B158DRAFT_1412 at 1460.539 kb on - strand, within B158DRAFT_1412 at 1460.540 kb on - strand, within B158DRAFT_1412 at 1460.558 kb on + strand, within B158DRAFT_1412 at 1460.558 kb on + strand, within B158DRAFT_1412 at 1460.558 kb on + strand, within B158DRAFT_1412 at 1460.558 kb on + strand, within B158DRAFT_1412 at 1460.566 kb on - strand, within B158DRAFT_1412 at 1460.566 kb on - strand, within B158DRAFT_1412 at 1460.566 kb on - strand, within B158DRAFT_1412 at 1460.566 kb on - strand, within B158DRAFT_1412 at 1460.566 kb on - strand, within B158DRAFT_1412 at 1460.566 kb on - strand, within B158DRAFT_1412 at 1460.567 kb on - strand, within B158DRAFT_1412 at 1460.644 kb on + strand, within B158DRAFT_1412 at 1460.663 kb on + strand, within B158DRAFT_1412 at 1460.721 kb on - strand, within B158DRAFT_1412 at 1460.757 kb on - strand, within B158DRAFT_1412 at 1460.796 kb on + strand at 1460.863 kb on + strand at 1460.863 kb on + strand at 1460.871 kb on - strand at 1460.974 kb on + strand, within B158DRAFT_1413 at 1460.996 kb on + strand, within B158DRAFT_1413 at 1461.030 kb on - strand at 1461.117 kb on + strand at 1461.123 kb on - strand at 1461.125 kb on - strand at 1461.125 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,459,298 + -1.1 1,459,327 - -3.4 1,459,327 - -0.4 1,459,651 - -1.2 1,459,652 - -1.5 1,459,653 - +2.7 1,459,716 + -1.5 1,459,716 + -1.2 1,459,716 + -0.5 1,459,716 + -0.2 1,459,716 + -0.8 1,459,716 + -0.3 1,459,721 + -0.8 1,459,724 - -1.4 1,459,724 - -0.4 1,459,724 - +2.9 1,459,745 + -0.4 1,459,753 - -2.6 1,459,819 - +0.5 1,459,819 - -0.4 1,459,824 - -2.0 1,459,915 - B158DRAFT_1411 0.50 -1.7 1,459,982 + B158DRAFT_1411 0.82 -0.3 1,459,982 + B158DRAFT_1411 0.82 -1.0 1,460,046 - -0.2 1,460,068 + +0.9 1,460,260 + +0.7 1,460,260 + +1.3 1,460,268 - +0.5 1,460,268 - +1.7 1,460,268 - +0.4 1,460,271 + -3.1 1,460,307 + B158DRAFT_1412 0.11 -1.9 1,460,307 + B158DRAFT_1412 0.11 +0.2 1,460,351 + B158DRAFT_1412 0.19 +3.1 1,460,359 - B158DRAFT_1412 0.20 +1.0 1,460,359 - B158DRAFT_1412 0.20 +0.8 1,460,369 - B158DRAFT_1412 0.22 +0.0 1,460,387 + B158DRAFT_1412 0.25 +0.4 1,460,393 - B158DRAFT_1412 0.26 +0.4 1,460,395 - B158DRAFT_1412 0.26 +4.6 1,460,428 - B158DRAFT_1412 0.32 +0.5 1,460,475 - B158DRAFT_1412 0.40 -2.1 1,460,477 + B158DRAFT_1412 0.41 -0.4 1,460,485 - B158DRAFT_1412 0.42 +1.2 1,460,513 + B158DRAFT_1412 0.47 -0.2 1,460,515 + B158DRAFT_1412 0.47 +1.3 1,460,532 + B158DRAFT_1412 0.50 +1.6 1,460,532 + B158DRAFT_1412 0.50 -0.7 1,460,532 + B158DRAFT_1412 0.50 -1.5 1,460,539 - B158DRAFT_1412 0.51 +0.6 1,460,540 - B158DRAFT_1412 0.51 -0.2 1,460,558 + B158DRAFT_1412 0.54 -0.4 1,460,558 + B158DRAFT_1412 0.54 -0.3 1,460,558 + B158DRAFT_1412 0.54 -1.8 1,460,558 + B158DRAFT_1412 0.54 -1.7 1,460,566 - B158DRAFT_1412 0.56 -0.2 1,460,566 - B158DRAFT_1412 0.56 +1.3 1,460,566 - B158DRAFT_1412 0.56 -2.6 1,460,566 - B158DRAFT_1412 0.56 +4.3 1,460,566 - B158DRAFT_1412 0.56 -0.2 1,460,566 - B158DRAFT_1412 0.56 +0.7 1,460,567 - B158DRAFT_1412 0.56 -0.4 1,460,644 + B158DRAFT_1412 0.69 +0.6 1,460,663 + B158DRAFT_1412 0.73 -0.6 1,460,721 - B158DRAFT_1412 0.82 -0.3 1,460,757 - B158DRAFT_1412 0.89 +0.6 1,460,796 + +1.2 1,460,863 + -0.3 1,460,863 + +0.7 1,460,871 - -2.0 1,460,974 + B158DRAFT_1413 0.62 -0.6 1,460,996 + B158DRAFT_1413 0.74 -0.5 1,461,030 - +3.8 1,461,117 + +0.7 1,461,123 - -0.7 1,461,125 - +0.1 1,461,125 - +0.6
Or see this region's nucleotide sequence