Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1364 and B158DRAFT_1365 are separated by 182 nucleotides B158DRAFT_1365 and B158DRAFT_1366 are separated by 194 nucleotides B158DRAFT_1366 and B158DRAFT_1367 are separated by 12 nucleotides B158DRAFT_1367 and B158DRAFT_1368 are separated by 61 nucleotides
B158DRAFT_1364: B158DRAFT_1364 - hypothetical protein, at 1,409,025 to 1,411,517
_1364
B158DRAFT_1365: B158DRAFT_1365 - hypothetical protein, at 1,411,700 to 1,412,236
_1365
B158DRAFT_1366: B158DRAFT_1366 - hypothetical protein, at 1,412,431 to 1,413,354
_1366
B158DRAFT_1367: B158DRAFT_1367 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,413,367 to 1,414,122
_1367
B158DRAFT_1368: B158DRAFT_1368 - Acetyltransferases, at 1,414,184 to 1,414,687
_1368
Position (kb)
1412
1413
1414 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 1411.432 kb on + strand at 1411.625 kb on - strand at 1411.663 kb on + strand at 1411.671 kb on - strand at 1411.788 kb on - strand, within B158DRAFT_1365 at 1411.898 kb on + strand, within B158DRAFT_1365 at 1411.944 kb on - strand, within B158DRAFT_1365 at 1411.966 kb on - strand, within B158DRAFT_1365 at 1411.992 kb on + strand, within B158DRAFT_1365 at 1412.002 kb on + strand, within B158DRAFT_1365 at 1412.002 kb on + strand, within B158DRAFT_1365 at 1412.010 kb on - strand, within B158DRAFT_1365 at 1412.047 kb on + strand, within B158DRAFT_1365 at 1412.047 kb on + strand, within B158DRAFT_1365 at 1412.055 kb on - strand, within B158DRAFT_1365 at 1412.096 kb on + strand, within B158DRAFT_1365 at 1412.096 kb on + strand, within B158DRAFT_1365 at 1412.104 kb on - strand, within B158DRAFT_1365 at 1412.104 kb on - strand, within B158DRAFT_1365 at 1412.108 kb on + strand, within B158DRAFT_1365 at 1412.393 kb on + strand at 1412.434 kb on - strand at 1412.434 kb on - strand at 1412.548 kb on + strand, within B158DRAFT_1366 at 1412.698 kb on + strand, within B158DRAFT_1366 at 1412.698 kb on + strand, within B158DRAFT_1366 at 1412.772 kb on - strand, within B158DRAFT_1366 at 1412.778 kb on - strand, within B158DRAFT_1366 at 1413.022 kb on - strand, within B158DRAFT_1366 at 1413.072 kb on + strand, within B158DRAFT_1366 at 1413.081 kb on - strand, within B158DRAFT_1366 at 1413.083 kb on + strand, within B158DRAFT_1366 at 1413.157 kb on - strand, within B158DRAFT_1366 at 1413.327 kb on + strand at 1413.327 kb on + strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.335 kb on - strand at 1413.340 kb on - strand at 1413.536 kb on + strand, within B158DRAFT_1367 at 1413.579 kb on - strand, within B158DRAFT_1367 at 1413.620 kb on - strand, within B158DRAFT_1367 at 1413.645 kb on - strand, within B158DRAFT_1367 at 1413.646 kb on + strand, within B158DRAFT_1367 at 1413.652 kb on - strand, within B158DRAFT_1367 at 1413.691 kb on + strand, within B158DRAFT_1367 at 1413.691 kb on + strand, within B158DRAFT_1367 at 1413.844 kb on - strand, within B158DRAFT_1367 at 1413.919 kb on + strand, within B158DRAFT_1367 at 1413.936 kb on - strand, within B158DRAFT_1367 at 1414.023 kb on + strand, within B158DRAFT_1367 at 1414.033 kb on + strand, within B158DRAFT_1367 at 1414.041 kb on - strand, within B158DRAFT_1367 at 1414.083 kb on - strand at 1414.284 kb on + strand, within B158DRAFT_1368 at 1414.292 kb on - strand, within B158DRAFT_1368 at 1414.292 kb on - strand, within B158DRAFT_1368 at 1414.299 kb on + strand, within B158DRAFT_1368 at 1414.299 kb on + strand, within B158DRAFT_1368 at 1414.299 kb on + strand, within B158DRAFT_1368 at 1414.324 kb on + strand, within B158DRAFT_1368 at 1414.335 kb on + strand, within B158DRAFT_1368
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,411,432 + -2.2 1,411,625 - -1.1 1,411,663 + -0.9 1,411,671 - -1.4 1,411,788 - B158DRAFT_1365 0.16 -0.1 1,411,898 + B158DRAFT_1365 0.37 -0.6 1,411,944 - B158DRAFT_1365 0.45 -0.4 1,411,966 - B158DRAFT_1365 0.50 -1.1 1,411,992 + B158DRAFT_1365 0.54 +0.4 1,412,002 + B158DRAFT_1365 0.56 +1.5 1,412,002 + B158DRAFT_1365 0.56 -1.5 1,412,010 - B158DRAFT_1365 0.58 +1.4 1,412,047 + B158DRAFT_1365 0.65 +1.7 1,412,047 + B158DRAFT_1365 0.65 +1.8 1,412,055 - B158DRAFT_1365 0.66 -0.9 1,412,096 + B158DRAFT_1365 0.74 +0.3 1,412,096 + B158DRAFT_1365 0.74 +1.3 1,412,104 - B158DRAFT_1365 0.75 -0.1 1,412,104 - B158DRAFT_1365 0.75 -2.4 1,412,108 + B158DRAFT_1365 0.76 -1.1 1,412,393 + -0.2 1,412,434 - -0.3 1,412,434 - -1.4 1,412,548 + B158DRAFT_1366 0.13 -1.6 1,412,698 + B158DRAFT_1366 0.29 +1.3 1,412,698 + B158DRAFT_1366 0.29 -0.4 1,412,772 - B158DRAFT_1366 0.37 +0.1 1,412,778 - B158DRAFT_1366 0.38 -0.6 1,413,022 - B158DRAFT_1366 0.64 -0.2 1,413,072 + B158DRAFT_1366 0.69 -1.1 1,413,081 - B158DRAFT_1366 0.70 -2.0 1,413,083 + B158DRAFT_1366 0.71 +0.9 1,413,157 - B158DRAFT_1366 0.79 +3.3 1,413,327 + -0.2 1,413,327 + +0.3 1,413,335 - +1.5 1,413,335 - -0.5 1,413,335 - -0.3 1,413,335 - -0.2 1,413,335 - +1.0 1,413,335 - -0.8 1,413,335 - +2.8 1,413,340 - +7.8 1,413,536 + B158DRAFT_1367 0.22 +1.3 1,413,579 - B158DRAFT_1367 0.28 -1.3 1,413,620 - B158DRAFT_1367 0.33 -0.2 1,413,645 - B158DRAFT_1367 0.37 +0.6 1,413,646 + B158DRAFT_1367 0.37 -0.2 1,413,652 - B158DRAFT_1367 0.38 -3.3 1,413,691 + B158DRAFT_1367 0.43 -1.6 1,413,691 + B158DRAFT_1367 0.43 +0.2 1,413,844 - B158DRAFT_1367 0.63 +0.5 1,413,919 + B158DRAFT_1367 0.73 +1.3 1,413,936 - B158DRAFT_1367 0.75 -1.3 1,414,023 + B158DRAFT_1367 0.87 -2.9 1,414,033 + B158DRAFT_1367 0.88 -0.3 1,414,041 - B158DRAFT_1367 0.89 -1.3 1,414,083 - +0.8 1,414,284 + B158DRAFT_1368 0.20 -0.5 1,414,292 - B158DRAFT_1368 0.21 -0.6 1,414,292 - B158DRAFT_1368 0.21 -2.5 1,414,299 + B158DRAFT_1368 0.23 +0.6 1,414,299 + B158DRAFT_1368 0.23 -1.1 1,414,299 + B158DRAFT_1368 0.23 +2.0 1,414,324 + B158DRAFT_1368 0.28 +0.5 1,414,335 + B158DRAFT_1368 0.30 -0.2
Or see this region's nucleotide sequence