Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1366

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1364 and B158DRAFT_1365 are separated by 182 nucleotidesB158DRAFT_1365 and B158DRAFT_1366 are separated by 194 nucleotidesB158DRAFT_1366 and B158DRAFT_1367 are separated by 12 nucleotidesB158DRAFT_1367 and B158DRAFT_1368 are separated by 61 nucleotides B158DRAFT_1364: B158DRAFT_1364 - hypothetical protein, at 1,409,025 to 1,411,517 _1364 B158DRAFT_1365: B158DRAFT_1365 - hypothetical protein, at 1,411,700 to 1,412,236 _1365 B158DRAFT_1366: B158DRAFT_1366 - hypothetical protein, at 1,412,431 to 1,413,354 _1366 B158DRAFT_1367: B158DRAFT_1367 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,413,367 to 1,414,122 _1367 B158DRAFT_1368: B158DRAFT_1368 - Acetyltransferases, at 1,414,184 to 1,414,687 _1368 Position (kb) 1412 1413 1414Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6 7 8at 1411.432 kb on + strandat 1411.625 kb on - strandat 1411.663 kb on + strandat 1411.671 kb on - strandat 1411.788 kb on - strand, within B158DRAFT_1365at 1411.898 kb on + strand, within B158DRAFT_1365at 1411.944 kb on - strand, within B158DRAFT_1365at 1411.966 kb on - strand, within B158DRAFT_1365at 1411.992 kb on + strand, within B158DRAFT_1365at 1412.002 kb on + strand, within B158DRAFT_1365at 1412.002 kb on + strand, within B158DRAFT_1365at 1412.010 kb on - strand, within B158DRAFT_1365at 1412.047 kb on + strand, within B158DRAFT_1365at 1412.047 kb on + strand, within B158DRAFT_1365at 1412.055 kb on - strand, within B158DRAFT_1365at 1412.096 kb on + strand, within B158DRAFT_1365at 1412.096 kb on + strand, within B158DRAFT_1365at 1412.104 kb on - strand, within B158DRAFT_1365at 1412.104 kb on - strand, within B158DRAFT_1365at 1412.108 kb on + strand, within B158DRAFT_1365at 1412.393 kb on + strandat 1412.434 kb on - strandat 1412.434 kb on - strandat 1412.548 kb on + strand, within B158DRAFT_1366at 1412.698 kb on + strand, within B158DRAFT_1366at 1412.698 kb on + strand, within B158DRAFT_1366at 1412.772 kb on - strand, within B158DRAFT_1366at 1412.778 kb on - strand, within B158DRAFT_1366at 1413.022 kb on - strand, within B158DRAFT_1366at 1413.072 kb on + strand, within B158DRAFT_1366at 1413.081 kb on - strand, within B158DRAFT_1366at 1413.083 kb on + strand, within B158DRAFT_1366at 1413.157 kb on - strand, within B158DRAFT_1366at 1413.327 kb on + strandat 1413.327 kb on + strandat 1413.335 kb on - strandat 1413.335 kb on - strandat 1413.335 kb on - strandat 1413.335 kb on - strandat 1413.335 kb on - strandat 1413.335 kb on - strandat 1413.335 kb on - strandat 1413.340 kb on - strandat 1413.536 kb on + strand, within B158DRAFT_1367at 1413.579 kb on - strand, within B158DRAFT_1367at 1413.620 kb on - strand, within B158DRAFT_1367at 1413.645 kb on - strand, within B158DRAFT_1367at 1413.646 kb on + strand, within B158DRAFT_1367at 1413.652 kb on - strand, within B158DRAFT_1367at 1413.691 kb on + strand, within B158DRAFT_1367at 1413.691 kb on + strand, within B158DRAFT_1367at 1413.844 kb on - strand, within B158DRAFT_1367at 1413.919 kb on + strand, within B158DRAFT_1367at 1413.936 kb on - strand, within B158DRAFT_1367at 1414.023 kb on + strand, within B158DRAFT_1367at 1414.033 kb on + strand, within B158DRAFT_1367at 1414.041 kb on - strand, within B158DRAFT_1367at 1414.083 kb on - strandat 1414.284 kb on + strand, within B158DRAFT_1368at 1414.292 kb on - strand, within B158DRAFT_1368at 1414.292 kb on - strand, within B158DRAFT_1368at 1414.299 kb on + strand, within B158DRAFT_1368at 1414.299 kb on + strand, within B158DRAFT_1368at 1414.299 kb on + strand, within B158DRAFT_1368at 1414.324 kb on + strand, within B158DRAFT_1368at 1414.335 kb on + strand, within B158DRAFT_1368

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,411,432 + -2.2
1,411,625 - -1.1
1,411,663 + -0.9
1,411,671 - -1.4
1,411,788 - B158DRAFT_1365 0.16 -0.1
1,411,898 + B158DRAFT_1365 0.37 -0.6
1,411,944 - B158DRAFT_1365 0.45 -0.4
1,411,966 - B158DRAFT_1365 0.50 -1.1
1,411,992 + B158DRAFT_1365 0.54 +0.4
1,412,002 + B158DRAFT_1365 0.56 +1.5
1,412,002 + B158DRAFT_1365 0.56 -1.5
1,412,010 - B158DRAFT_1365 0.58 +1.4
1,412,047 + B158DRAFT_1365 0.65 +1.7
1,412,047 + B158DRAFT_1365 0.65 +1.8
1,412,055 - B158DRAFT_1365 0.66 -0.9
1,412,096 + B158DRAFT_1365 0.74 +0.3
1,412,096 + B158DRAFT_1365 0.74 +1.3
1,412,104 - B158DRAFT_1365 0.75 -0.1
1,412,104 - B158DRAFT_1365 0.75 -2.4
1,412,108 + B158DRAFT_1365 0.76 -1.1
1,412,393 + -0.2
1,412,434 - -0.3
1,412,434 - -1.4
1,412,548 + B158DRAFT_1366 0.13 -1.6
1,412,698 + B158DRAFT_1366 0.29 +1.3
1,412,698 + B158DRAFT_1366 0.29 -0.4
1,412,772 - B158DRAFT_1366 0.37 +0.1
1,412,778 - B158DRAFT_1366 0.38 -0.6
1,413,022 - B158DRAFT_1366 0.64 -0.2
1,413,072 + B158DRAFT_1366 0.69 -1.1
1,413,081 - B158DRAFT_1366 0.70 -2.0
1,413,083 + B158DRAFT_1366 0.71 +0.9
1,413,157 - B158DRAFT_1366 0.79 +3.3
1,413,327 + -0.2
1,413,327 + +0.3
1,413,335 - +1.5
1,413,335 - -0.5
1,413,335 - -0.3
1,413,335 - -0.2
1,413,335 - +1.0
1,413,335 - -0.8
1,413,335 - +2.8
1,413,340 - +7.8
1,413,536 + B158DRAFT_1367 0.22 +1.3
1,413,579 - B158DRAFT_1367 0.28 -1.3
1,413,620 - B158DRAFT_1367 0.33 -0.2
1,413,645 - B158DRAFT_1367 0.37 +0.6
1,413,646 + B158DRAFT_1367 0.37 -0.2
1,413,652 - B158DRAFT_1367 0.38 -3.3
1,413,691 + B158DRAFT_1367 0.43 -1.6
1,413,691 + B158DRAFT_1367 0.43 +0.2
1,413,844 - B158DRAFT_1367 0.63 +0.5
1,413,919 + B158DRAFT_1367 0.73 +1.3
1,413,936 - B158DRAFT_1367 0.75 -1.3
1,414,023 + B158DRAFT_1367 0.87 -2.9
1,414,033 + B158DRAFT_1367 0.88 -0.3
1,414,041 - B158DRAFT_1367 0.89 -1.3
1,414,083 - +0.8
1,414,284 + B158DRAFT_1368 0.20 -0.5
1,414,292 - B158DRAFT_1368 0.21 -0.6
1,414,292 - B158DRAFT_1368 0.21 -2.5
1,414,299 + B158DRAFT_1368 0.23 +0.6
1,414,299 + B158DRAFT_1368 0.23 -1.1
1,414,299 + B158DRAFT_1368 0.23 +2.0
1,414,324 + B158DRAFT_1368 0.28 +0.5
1,414,335 + B158DRAFT_1368 0.30 -0.2

Or see this region's nucleotide sequence