Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1200 and B158DRAFT_1201 are separated by 47 nucleotides B158DRAFT_1201 and B158DRAFT_1202 are separated by 10 nucleotides
B158DRAFT_1200: B158DRAFT_1200 - fumarase, class II (EC 4.2.1.2), at 1,238,550 to 1,239,911
_1200
B158DRAFT_1201: B158DRAFT_1201 - Predicted redox protein, regulator of disulfide bond formation, at 1,239,959 to 1,240,411
_1201
B158DRAFT_1202: B158DRAFT_1202 - EamA-like transporter family., at 1,240,422 to 1,241,318
_1202
Position (kb)
1239
1240
1241 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 1239.015 kb on - strand, within B158DRAFT_1200 at 1239.082 kb on - strand, within B158DRAFT_1200 at 1239.142 kb on + strand, within B158DRAFT_1200 at 1239.212 kb on + strand, within B158DRAFT_1200 at 1239.302 kb on - strand, within B158DRAFT_1200 at 1239.334 kb on + strand, within B158DRAFT_1200 at 1239.352 kb on + strand, within B158DRAFT_1200 at 1239.369 kb on + strand, within B158DRAFT_1200 at 1239.371 kb on + strand, within B158DRAFT_1200 at 1239.432 kb on + strand, within B158DRAFT_1200 at 1239.487 kb on + strand, within B158DRAFT_1200 at 1239.487 kb on + strand, within B158DRAFT_1200 at 1239.526 kb on - strand, within B158DRAFT_1200 at 1239.572 kb on + strand, within B158DRAFT_1200 at 1239.814 kb on + strand at 1239.822 kb on - strand at 1240.175 kb on + strand, within B158DRAFT_1201 at 1240.194 kb on - strand, within B158DRAFT_1201 at 1240.202 kb on - strand, within B158DRAFT_1201 at 1240.244 kb on + strand, within B158DRAFT_1201 at 1240.252 kb on - strand, within B158DRAFT_1201 at 1240.286 kb on + strand, within B158DRAFT_1201 at 1240.293 kb on + strand, within B158DRAFT_1201 at 1240.293 kb on + strand, within B158DRAFT_1201 at 1240.301 kb on - strand, within B158DRAFT_1201 at 1240.301 kb on - strand, within B158DRAFT_1201 at 1240.439 kb on + strand at 1240.467 kb on - strand at 1240.472 kb on - strand at 1240.507 kb on - strand at 1240.565 kb on - strand, within B158DRAFT_1202 at 1240.607 kb on - strand, within B158DRAFT_1202 at 1240.661 kb on - strand, within B158DRAFT_1202 at 1240.690 kb on + strand, within B158DRAFT_1202 at 1240.696 kb on + strand, within B158DRAFT_1202 at 1240.696 kb on + strand, within B158DRAFT_1202 at 1240.745 kb on - strand, within B158DRAFT_1202 at 1240.778 kb on - strand, within B158DRAFT_1202 at 1240.848 kb on + strand, within B158DRAFT_1202 at 1240.855 kb on + strand, within B158DRAFT_1202 at 1240.855 kb on + strand, within B158DRAFT_1202 at 1240.863 kb on - strand, within B158DRAFT_1202 at 1240.926 kb on + strand, within B158DRAFT_1202 at 1240.928 kb on - strand, within B158DRAFT_1202 at 1240.929 kb on - strand, within B158DRAFT_1202 at 1240.931 kb on + strand, within B158DRAFT_1202 at 1240.934 kb on - strand, within B158DRAFT_1202 at 1241.036 kb on - strand, within B158DRAFT_1202 at 1241.040 kb on + strand, within B158DRAFT_1202 at 1241.041 kb on - strand, within B158DRAFT_1202 at 1241.100 kb on + strand, within B158DRAFT_1202 at 1241.123 kb on + strand, within B158DRAFT_1202 at 1241.139 kb on - strand, within B158DRAFT_1202 at 1241.189 kb on + strand, within B158DRAFT_1202 at 1241.189 kb on + strand, within B158DRAFT_1202 at 1241.222 kb on + strand, within B158DRAFT_1202 at 1241.277 kb on + strand at 1241.291 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,239,015 - B158DRAFT_1200 0.34 -2.0 1,239,082 - B158DRAFT_1200 0.39 -0.7 1,239,142 + B158DRAFT_1200 0.43 -0.2 1,239,212 + B158DRAFT_1200 0.49 -0.8 1,239,302 - B158DRAFT_1200 0.55 +0.4 1,239,334 + B158DRAFT_1200 0.58 -0.3 1,239,352 + B158DRAFT_1200 0.59 -1.1 1,239,369 + B158DRAFT_1200 0.60 +1.8 1,239,371 + B158DRAFT_1200 0.60 -0.3 1,239,432 + B158DRAFT_1200 0.65 -1.7 1,239,487 + B158DRAFT_1200 0.69 -0.1 1,239,487 + B158DRAFT_1200 0.69 -1.5 1,239,526 - B158DRAFT_1200 0.72 -0.2 1,239,572 + B158DRAFT_1200 0.75 +0.1 1,239,814 + -1.4 1,239,822 - -0.9 1,240,175 + B158DRAFT_1201 0.48 -0.6 1,240,194 - B158DRAFT_1201 0.52 +0.6 1,240,202 - B158DRAFT_1201 0.54 -0.4 1,240,244 + B158DRAFT_1201 0.63 +0.3 1,240,252 - B158DRAFT_1201 0.65 +0.5 1,240,286 + B158DRAFT_1201 0.72 -0.3 1,240,293 + B158DRAFT_1201 0.74 -0.8 1,240,293 + B158DRAFT_1201 0.74 +2.6 1,240,301 - B158DRAFT_1201 0.75 +1.0 1,240,301 - B158DRAFT_1201 0.75 +5.4 1,240,439 + -0.9 1,240,467 - +2.1 1,240,472 - +0.2 1,240,507 - +0.5 1,240,565 - B158DRAFT_1202 0.16 -1.0 1,240,607 - B158DRAFT_1202 0.21 +1.7 1,240,661 - B158DRAFT_1202 0.27 -1.9 1,240,690 + B158DRAFT_1202 0.30 +0.5 1,240,696 + B158DRAFT_1202 0.31 +0.4 1,240,696 + B158DRAFT_1202 0.31 -1.0 1,240,745 - B158DRAFT_1202 0.36 -2.1 1,240,778 - B158DRAFT_1202 0.40 -1.5 1,240,848 + B158DRAFT_1202 0.47 +0.3 1,240,855 + B158DRAFT_1202 0.48 +0.2 1,240,855 + B158DRAFT_1202 0.48 -1.5 1,240,863 - B158DRAFT_1202 0.49 +3.0 1,240,926 + B158DRAFT_1202 0.56 -0.3 1,240,928 - B158DRAFT_1202 0.56 -3.2 1,240,929 - B158DRAFT_1202 0.57 +2.6 1,240,931 + B158DRAFT_1202 0.57 +2.7 1,240,934 - B158DRAFT_1202 0.57 -2.6 1,241,036 - B158DRAFT_1202 0.68 +0.8 1,241,040 + B158DRAFT_1202 0.69 -1.7 1,241,041 - B158DRAFT_1202 0.69 -1.0 1,241,100 + B158DRAFT_1202 0.76 -1.7 1,241,123 + B158DRAFT_1202 0.78 +0.2 1,241,139 - B158DRAFT_1202 0.80 +0.6 1,241,189 + B158DRAFT_1202 0.86 -0.6 1,241,189 + B158DRAFT_1202 0.86 -1.1 1,241,222 + B158DRAFT_1202 0.89 +0.3 1,241,277 + +1.9 1,241,291 + -0.2
Or see this region's nucleotide sequence