Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1162

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1161 and B158DRAFT_1162 are separated by 82 nucleotidesB158DRAFT_1162 and B158DRAFT_1163 are separated by 75 nucleotidesB158DRAFT_1163 and B158DRAFT_1164 overlap by 4 nucleotides B158DRAFT_1161: B158DRAFT_1161 - aspartate kinase (EC 2.7.2.4), at 1,199,257 to 1,201,824 _1161 B158DRAFT_1162: B158DRAFT_1162 - hypothetical protein, at 1,201,907 to 1,202,332 _1162 B158DRAFT_1163: B158DRAFT_1163 - hypothetical protein, at 1,202,408 to 1,202,752 _1163 B158DRAFT_1164: B158DRAFT_1164 - valyl-tRNA synthetase (EC 6.1.1.9), at 1,202,749 to 1,205,520 _1164 Position (kb) 1201 1202 1203Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1200.939 kb on + strand, within B158DRAFT_1161at 1200.997 kb on - strand, within B158DRAFT_1161at 1201.052 kb on - strand, within B158DRAFT_1161at 1201.202 kb on - strand, within B158DRAFT_1161at 1201.270 kb on + strand, within B158DRAFT_1161at 1201.278 kb on - strand, within B158DRAFT_1161at 1201.288 kb on - strand, within B158DRAFT_1161at 1201.288 kb on - strand, within B158DRAFT_1161at 1201.369 kb on + strand, within B158DRAFT_1161at 1201.452 kb on + strand, within B158DRAFT_1161at 1201.457 kb on + strand, within B158DRAFT_1161at 1201.460 kb on - strand, within B158DRAFT_1161at 1201.465 kb on - strand, within B158DRAFT_1161at 1201.585 kb on + strandat 1201.593 kb on - strandat 1201.764 kb on - strandat 1201.796 kb on - strandat 1201.809 kb on + strandat 1201.809 kb on + strandat 1201.819 kb on + strandat 1201.958 kb on + strand, within B158DRAFT_1162at 1202.049 kb on - strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.080 kb on + strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.088 kb on - strand, within B158DRAFT_1162at 1202.124 kb on + strand, within B158DRAFT_1162at 1202.124 kb on + strand, within B158DRAFT_1162at 1202.132 kb on - strand, within B158DRAFT_1162at 1202.132 kb on - strand, within B158DRAFT_1162at 1202.132 kb on - strand, within B158DRAFT_1162at 1202.142 kb on - strand, within B158DRAFT_1162at 1202.189 kb on + strand, within B158DRAFT_1162at 1202.189 kb on + strand, within B158DRAFT_1162at 1202.197 kb on - strand, within B158DRAFT_1162at 1202.227 kb on - strand, within B158DRAFT_1162at 1202.319 kb on - strandat 1202.413 kb on + strandat 1202.474 kb on + strand, within B158DRAFT_1163at 1202.482 kb on - strand, within B158DRAFT_1163at 1202.543 kb on - strand, within B158DRAFT_1163at 1202.599 kb on - strand, within B158DRAFT_1163at 1202.634 kb on + strand, within B158DRAFT_1163at 1202.642 kb on - strand, within B158DRAFT_1163at 1202.642 kb on - strand, within B158DRAFT_1163at 1202.648 kb on + strand, within B158DRAFT_1163

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,200,939 + B158DRAFT_1161 0.65 +1.7
1,200,997 - B158DRAFT_1161 0.68 +0.3
1,201,052 - B158DRAFT_1161 0.70 -2.2
1,201,202 - B158DRAFT_1161 0.76 -0.1
1,201,270 + B158DRAFT_1161 0.78 -0.4
1,201,278 - B158DRAFT_1161 0.79 -3.1
1,201,288 - B158DRAFT_1161 0.79 +2.1
1,201,288 - B158DRAFT_1161 0.79 +0.3
1,201,369 + B158DRAFT_1161 0.82 -0.1
1,201,452 + B158DRAFT_1161 0.85 -1.0
1,201,457 + B158DRAFT_1161 0.86 +0.3
1,201,460 - B158DRAFT_1161 0.86 -0.2
1,201,465 - B158DRAFT_1161 0.86 +1.4
1,201,585 + -1.5
1,201,593 - +0.1
1,201,764 - -0.5
1,201,796 - -0.4
1,201,809 + -0.0
1,201,809 + -1.4
1,201,819 + +0.3
1,201,958 + B158DRAFT_1162 0.12 +0.8
1,202,049 - B158DRAFT_1162 0.33 +0.4
1,202,080 + B158DRAFT_1162 0.41 +0.0
1,202,080 + B158DRAFT_1162 0.41 -2.3
1,202,080 + B158DRAFT_1162 0.41 +0.1
1,202,080 + B158DRAFT_1162 0.41 +0.0
1,202,080 + B158DRAFT_1162 0.41 +0.2
1,202,080 + B158DRAFT_1162 0.41 -1.2
1,202,080 + B158DRAFT_1162 0.41 -2.4
1,202,080 + B158DRAFT_1162 0.41 +0.5
1,202,080 + B158DRAFT_1162 0.41 -3.3
1,202,080 + B158DRAFT_1162 0.41 -1.5
1,202,080 + B158DRAFT_1162 0.41 -0.4
1,202,080 + B158DRAFT_1162 0.41 -0.0
1,202,080 + B158DRAFT_1162 0.41 -1.8
1,202,080 + B158DRAFT_1162 0.41 -0.3
1,202,080 + B158DRAFT_1162 0.41 -1.3
1,202,080 + B158DRAFT_1162 0.41 -1.7
1,202,080 + B158DRAFT_1162 0.41 +1.1
1,202,080 + B158DRAFT_1162 0.41 -1.1
1,202,080 + B158DRAFT_1162 0.41 -1.4
1,202,088 - B158DRAFT_1162 0.42 -0.0
1,202,088 - B158DRAFT_1162 0.42 -2.0
1,202,088 - B158DRAFT_1162 0.42 -0.7
1,202,088 - B158DRAFT_1162 0.42 -2.8
1,202,088 - B158DRAFT_1162 0.42 +2.7
1,202,088 - B158DRAFT_1162 0.42 +0.8
1,202,088 - B158DRAFT_1162 0.42 -0.8
1,202,088 - B158DRAFT_1162 0.42 +0.1
1,202,088 - B158DRAFT_1162 0.42 -0.2
1,202,088 - B158DRAFT_1162 0.42 -0.7
1,202,088 - B158DRAFT_1162 0.42 +2.2
1,202,124 + B158DRAFT_1162 0.51 +1.4
1,202,124 + B158DRAFT_1162 0.51 -0.0
1,202,132 - B158DRAFT_1162 0.53 +0.9
1,202,132 - B158DRAFT_1162 0.53 -0.9
1,202,132 - B158DRAFT_1162 0.53 +0.0
1,202,142 - B158DRAFT_1162 0.55 +0.4
1,202,189 + B158DRAFT_1162 0.66 -1.6
1,202,189 + B158DRAFT_1162 0.66 -0.2
1,202,197 - B158DRAFT_1162 0.68 -0.4
1,202,227 - B158DRAFT_1162 0.75 +1.7
1,202,319 - -2.2
1,202,413 + -1.3
1,202,474 + B158DRAFT_1163 0.19 +0.4
1,202,482 - B158DRAFT_1163 0.21 -0.6
1,202,543 - B158DRAFT_1163 0.39 +0.1
1,202,599 - B158DRAFT_1163 0.55 -1.9
1,202,634 + B158DRAFT_1163 0.66 -2.3
1,202,642 - B158DRAFT_1163 0.68 -0.2
1,202,642 - B158DRAFT_1163 0.68 -1.2
1,202,648 + B158DRAFT_1163 0.70 -3.0

Or see this region's nucleotide sequence