Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1151 and B158DRAFT_1152 are separated by 47 nucleotides B158DRAFT_1152 and B158DRAFT_1153 are separated by 110 nucleotides
B158DRAFT_1151: B158DRAFT_1151 - Uncharacterized protein conserved in bacteria, at 1,186,827 to 1,187,777
_1151
B158DRAFT_1152: B158DRAFT_1152 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC 1.17.4.3), at 1,187,825 to 1,188,964
_1152
B158DRAFT_1153: B158DRAFT_1153 - histidyl-tRNA synthetase (EC 6.1.1.21), at 1,189,075 to 1,190,346
_1153
Position (kb)
1187
1188
1189 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6 at 1186.900 kb on - strand at 1186.968 kb on + strand, within B158DRAFT_1151 at 1186.987 kb on + strand, within B158DRAFT_1151 at 1186.987 kb on + strand, within B158DRAFT_1151 at 1186.987 kb on + strand, within B158DRAFT_1151 at 1186.987 kb on + strand, within B158DRAFT_1151 at 1186.995 kb on - strand, within B158DRAFT_1151 at 1187.183 kb on - strand, within B158DRAFT_1151 at 1187.264 kb on - strand, within B158DRAFT_1151 at 1187.299 kb on - strand, within B158DRAFT_1151 at 1187.301 kb on + strand, within B158DRAFT_1151 at 1187.301 kb on + strand, within B158DRAFT_1151 at 1187.359 kb on + strand, within B158DRAFT_1151 at 1187.359 kb on + strand, within B158DRAFT_1151 at 1187.361 kb on + strand, within B158DRAFT_1151 at 1187.367 kb on - strand, within B158DRAFT_1151 at 1187.369 kb on - strand, within B158DRAFT_1151 at 1187.373 kb on + strand, within B158DRAFT_1151 at 1187.385 kb on + strand, within B158DRAFT_1151 at 1187.388 kb on - strand, within B158DRAFT_1151 at 1187.395 kb on + strand, within B158DRAFT_1151 at 1187.395 kb on + strand, within B158DRAFT_1151 at 1187.395 kb on + strand, within B158DRAFT_1151 at 1187.395 kb on + strand, within B158DRAFT_1151 at 1187.395 kb on + strand, within B158DRAFT_1151 at 1187.396 kb on - strand, within B158DRAFT_1151 at 1187.403 kb on - strand, within B158DRAFT_1151 at 1187.403 kb on - strand, within B158DRAFT_1151 at 1187.403 kb on - strand, within B158DRAFT_1151 at 1187.403 kb on - strand, within B158DRAFT_1151 at 1187.408 kb on - strand, within B158DRAFT_1151 at 1187.428 kb on + strand, within B158DRAFT_1151 at 1187.436 kb on - strand, within B158DRAFT_1151 at 1187.442 kb on - strand, within B158DRAFT_1151 at 1187.519 kb on + strand, within B158DRAFT_1151 at 1187.519 kb on + strand, within B158DRAFT_1151 at 1187.519 kb on + strand, within B158DRAFT_1151 at 1187.527 kb on - strand, within B158DRAFT_1151 at 1187.527 kb on - strand, within B158DRAFT_1151 at 1187.527 kb on - strand, within B158DRAFT_1151 at 1187.552 kb on - strand, within B158DRAFT_1151 at 1187.552 kb on - strand, within B158DRAFT_1151 at 1187.581 kb on + strand, within B158DRAFT_1151 at 1187.581 kb on + strand, within B158DRAFT_1151 at 1187.589 kb on - strand, within B158DRAFT_1151 at 1187.653 kb on + strand, within B158DRAFT_1151 at 1187.661 kb on - strand, within B158DRAFT_1151 at 1187.661 kb on - strand, within B158DRAFT_1151 at 1187.684 kb on + strand at 1187.684 kb on + strand at 1187.684 kb on + strand at 1187.686 kb on - strand at 1187.692 kb on - strand at 1187.692 kb on - strand at 1187.692 kb on - strand at 1187.692 kb on - strand at 1187.692 kb on - strand at 1187.707 kb on + strand at 1187.757 kb on + strand at 1187.785 kb on + strand at 1187.785 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,186,900 - -1.7 1,186,968 + B158DRAFT_1151 0.15 -0.7 1,186,987 + B158DRAFT_1151 0.17 +0.0 1,186,987 + B158DRAFT_1151 0.17 +0.2 1,186,987 + B158DRAFT_1151 0.17 +0.0 1,186,987 + B158DRAFT_1151 0.17 -0.9 1,186,995 - B158DRAFT_1151 0.18 -1.1 1,187,183 - B158DRAFT_1151 0.37 -2.3 1,187,264 - B158DRAFT_1151 0.46 +0.7 1,187,299 - B158DRAFT_1151 0.50 +0.3 1,187,301 + B158DRAFT_1151 0.50 -1.2 1,187,301 + B158DRAFT_1151 0.50 -0.6 1,187,359 + B158DRAFT_1151 0.56 +0.8 1,187,359 + B158DRAFT_1151 0.56 -0.5 1,187,361 + B158DRAFT_1151 0.56 -0.7 1,187,367 - B158DRAFT_1151 0.57 -1.3 1,187,369 - B158DRAFT_1151 0.57 +0.2 1,187,373 + B158DRAFT_1151 0.57 -1.1 1,187,385 + B158DRAFT_1151 0.59 +1.0 1,187,388 - B158DRAFT_1151 0.59 -2.6 1,187,395 + B158DRAFT_1151 0.60 -0.3 1,187,395 + B158DRAFT_1151 0.60 +0.6 1,187,395 + B158DRAFT_1151 0.60 -2.0 1,187,395 + B158DRAFT_1151 0.60 +0.5 1,187,395 + B158DRAFT_1151 0.60 -1.9 1,187,396 - B158DRAFT_1151 0.60 -0.7 1,187,403 - B158DRAFT_1151 0.61 +1.4 1,187,403 - B158DRAFT_1151 0.61 -0.6 1,187,403 - B158DRAFT_1151 0.61 -2.0 1,187,403 - B158DRAFT_1151 0.61 +1.6 1,187,408 - B158DRAFT_1151 0.61 -1.4 1,187,428 + B158DRAFT_1151 0.63 +2.0 1,187,436 - B158DRAFT_1151 0.64 +2.8 1,187,442 - B158DRAFT_1151 0.65 +1.3 1,187,519 + B158DRAFT_1151 0.73 -0.4 1,187,519 + B158DRAFT_1151 0.73 +0.1 1,187,519 + B158DRAFT_1151 0.73 -2.2 1,187,527 - B158DRAFT_1151 0.74 +2.0 1,187,527 - B158DRAFT_1151 0.74 -0.1 1,187,527 - B158DRAFT_1151 0.74 -0.8 1,187,552 - B158DRAFT_1151 0.76 +0.7 1,187,552 - B158DRAFT_1151 0.76 +5.8 1,187,581 + B158DRAFT_1151 0.79 -0.2 1,187,581 + B158DRAFT_1151 0.79 -0.3 1,187,589 - B158DRAFT_1151 0.80 +0.3 1,187,653 + B158DRAFT_1151 0.87 -0.7 1,187,661 - B158DRAFT_1151 0.88 -2.8 1,187,661 - B158DRAFT_1151 0.88 +0.0 1,187,684 + +1.0 1,187,684 + -1.7 1,187,684 + -0.8 1,187,686 - -1.1 1,187,692 - -0.7 1,187,692 - -0.1 1,187,692 - -0.5 1,187,692 - -1.3 1,187,692 - +0.1 1,187,707 + -1.0 1,187,757 + -3.2 1,187,785 + -1.2 1,187,785 + -1.5
Or see this region's nucleotide sequence