Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1105

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1104 and B158DRAFT_1105 are separated by 208 nucleotidesB158DRAFT_1105 and B158DRAFT_1106 are separated by 63 nucleotidesB158DRAFT_1106 and B158DRAFT_1107 are separated by 11 nucleotides B158DRAFT_1104: B158DRAFT_1104 - Putative intracellular protease/amidase, at 1,142,466 to 1,143,143 _1104 B158DRAFT_1105: B158DRAFT_1105 - hypothetical protein, at 1,143,352 to 1,143,624 _1105 B158DRAFT_1106: B158DRAFT_1106 - Protein metal binding site., at 1,143,688 to 1,144,302 _1106 B158DRAFT_1107: B158DRAFT_1107 - Protein metal binding site., at 1,144,314 to 1,144,898 _1107 Position (kb) 1143 1144Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1142.390 kb on - strandat 1142.420 kb on + strandat 1142.428 kb on - strandat 1142.448 kb on + strandat 1142.456 kb on - strandat 1142.456 kb on - strandat 1142.526 kb on + strandat 1142.541 kb on - strand, within B158DRAFT_1104at 1142.595 kb on + strand, within B158DRAFT_1104at 1142.615 kb on + strand, within B158DRAFT_1104at 1142.623 kb on - strand, within B158DRAFT_1104at 1142.799 kb on + strand, within B158DRAFT_1104at 1142.807 kb on - strand, within B158DRAFT_1104at 1142.817 kb on - strand, within B158DRAFT_1104at 1142.817 kb on - strand, within B158DRAFT_1104at 1142.885 kb on - strand, within B158DRAFT_1104at 1142.890 kb on - strand, within B158DRAFT_1104at 1142.947 kb on + strand, within B158DRAFT_1104at 1142.955 kb on - strand, within B158DRAFT_1104at 1142.964 kb on - strand, within B158DRAFT_1104at 1143.034 kb on - strand, within B158DRAFT_1104at 1143.084 kb on + strandat 1143.091 kb on + strandat 1143.125 kb on + strandat 1143.133 kb on - strandat 1143.133 kb on - strandat 1143.181 kb on + strandat 1143.181 kb on + strandat 1143.181 kb on + strandat 1143.442 kb on + strand, within B158DRAFT_1105at 1143.501 kb on + strand, within B158DRAFT_1105at 1143.509 kb on - strand, within B158DRAFT_1105at 1143.509 kb on - strand, within B158DRAFT_1105at 1143.509 kb on - strand, within B158DRAFT_1105at 1143.509 kb on - strand, within B158DRAFT_1105at 1143.558 kb on - strand, within B158DRAFT_1105at 1143.676 kb on + strandat 1143.820 kb on - strand, within B158DRAFT_1106at 1143.846 kb on + strand, within B158DRAFT_1106at 1143.859 kb on - strand, within B158DRAFT_1106at 1143.859 kb on - strand, within B158DRAFT_1106at 1143.859 kb on - strand, within B158DRAFT_1106at 1143.933 kb on - strand, within B158DRAFT_1106at 1143.940 kb on - strand, within B158DRAFT_1106at 1143.940 kb on - strand, within B158DRAFT_1106at 1143.944 kb on + strand, within B158DRAFT_1106at 1143.944 kb on + strand, within B158DRAFT_1106at 1143.952 kb on - strand, within B158DRAFT_1106at 1143.952 kb on - strand, within B158DRAFT_1106at 1143.952 kb on - strand, within B158DRAFT_1106at 1143.952 kb on - strand, within B158DRAFT_1106at 1143.954 kb on + strand, within B158DRAFT_1106at 1143.957 kb on - strand, within B158DRAFT_1106at 1143.957 kb on - strand, within B158DRAFT_1106at 1143.962 kb on - strand, within B158DRAFT_1106at 1143.962 kb on - strand, within B158DRAFT_1106at 1143.970 kb on + strand, within B158DRAFT_1106at 1143.978 kb on - strand, within B158DRAFT_1106at 1143.985 kb on - strand, within B158DRAFT_1106at 1144.108 kb on - strand, within B158DRAFT_1106at 1144.113 kb on - strand, within B158DRAFT_1106at 1144.155 kb on - strand, within B158DRAFT_1106at 1144.236 kb on - strand, within B158DRAFT_1106at 1144.312 kb on + strandat 1144.320 kb on - strandat 1144.386 kb on + strand, within B158DRAFT_1107at 1144.411 kb on - strand, within B158DRAFT_1107at 1144.452 kb on - strand, within B158DRAFT_1107at 1144.541 kb on - strand, within B158DRAFT_1107at 1144.541 kb on - strand, within B158DRAFT_1107at 1144.554 kb on + strand, within B158DRAFT_1107at 1144.554 kb on + strand, within B158DRAFT_1107at 1144.562 kb on - strand, within B158DRAFT_1107at 1144.562 kb on - strand, within B158DRAFT_1107at 1144.562 kb on - strand, within B158DRAFT_1107at 1144.562 kb on - strand, within B158DRAFT_1107at 1144.562 kb on - strand, within B158DRAFT_1107at 1144.592 kb on - strand, within B158DRAFT_1107at 1144.599 kb on + strand, within B158DRAFT_1107

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,142,390 - +1.0
1,142,420 + -2.7
1,142,428 - +0.8
1,142,448 + -0.8
1,142,456 - -0.6
1,142,456 - +0.5
1,142,526 + -0.7
1,142,541 - B158DRAFT_1104 0.11 -0.8
1,142,595 + B158DRAFT_1104 0.19 -2.2
1,142,615 + B158DRAFT_1104 0.22 -0.6
1,142,623 - B158DRAFT_1104 0.23 -0.3
1,142,799 + B158DRAFT_1104 0.49 -1.6
1,142,807 - B158DRAFT_1104 0.50 -1.4
1,142,817 - B158DRAFT_1104 0.52 -2.1
1,142,817 - B158DRAFT_1104 0.52 -0.4
1,142,885 - B158DRAFT_1104 0.62 -0.1
1,142,890 - B158DRAFT_1104 0.63 +1.5
1,142,947 + B158DRAFT_1104 0.71 -0.2
1,142,955 - B158DRAFT_1104 0.72 +2.0
1,142,964 - B158DRAFT_1104 0.73 -0.2
1,143,034 - B158DRAFT_1104 0.84 +1.1
1,143,084 + -1.9
1,143,091 + +3.7
1,143,125 + -1.9
1,143,133 - -0.6
1,143,133 - -0.7
1,143,181 + +0.2
1,143,181 + -0.4
1,143,181 + +0.8
1,143,442 + B158DRAFT_1105 0.33 +0.6
1,143,501 + B158DRAFT_1105 0.55 -0.7
1,143,509 - B158DRAFT_1105 0.58 -0.4
1,143,509 - B158DRAFT_1105 0.58 -0.0
1,143,509 - B158DRAFT_1105 0.58 -0.3
1,143,509 - B158DRAFT_1105 0.58 -0.6
1,143,558 - B158DRAFT_1105 0.75 -0.6
1,143,676 + -0.6
1,143,820 - B158DRAFT_1106 0.21 +0.7
1,143,846 + B158DRAFT_1106 0.26 -0.2
1,143,859 - B158DRAFT_1106 0.28 -0.0
1,143,859 - B158DRAFT_1106 0.28 +0.6
1,143,859 - B158DRAFT_1106 0.28 +0.8
1,143,933 - B158DRAFT_1106 0.40 +0.2
1,143,940 - B158DRAFT_1106 0.41 -1.1
1,143,940 - B158DRAFT_1106 0.41 -0.3
1,143,944 + B158DRAFT_1106 0.42 -1.0
1,143,944 + B158DRAFT_1106 0.42 +2.3
1,143,952 - B158DRAFT_1106 0.43 -0.1
1,143,952 - B158DRAFT_1106 0.43 -1.1
1,143,952 - B158DRAFT_1106 0.43 -0.8
1,143,952 - B158DRAFT_1106 0.43 -0.3
1,143,954 + B158DRAFT_1106 0.43 +1.5
1,143,957 - B158DRAFT_1106 0.44 -1.1
1,143,957 - B158DRAFT_1106 0.44 -0.9
1,143,962 - B158DRAFT_1106 0.45 -3.5
1,143,962 - B158DRAFT_1106 0.45 -1.6
1,143,970 + B158DRAFT_1106 0.46 -1.8
1,143,978 - B158DRAFT_1106 0.47 +0.2
1,143,985 - B158DRAFT_1106 0.48 -0.6
1,144,108 - B158DRAFT_1106 0.68 -0.9
1,144,113 - B158DRAFT_1106 0.69 +0.2
1,144,155 - B158DRAFT_1106 0.76 -0.1
1,144,236 - B158DRAFT_1106 0.89 -0.6
1,144,312 + -1.2
1,144,320 - +0.2
1,144,386 + B158DRAFT_1107 0.12 -1.7
1,144,411 - B158DRAFT_1107 0.17 -0.4
1,144,452 - B158DRAFT_1107 0.24 -1.7
1,144,541 - B158DRAFT_1107 0.39 -0.8
1,144,541 - B158DRAFT_1107 0.39 +0.1
1,144,554 + B158DRAFT_1107 0.41 -0.7
1,144,554 + B158DRAFT_1107 0.41 +0.1
1,144,562 - B158DRAFT_1107 0.42 -0.3
1,144,562 - B158DRAFT_1107 0.42 -0.2
1,144,562 - B158DRAFT_1107 0.42 -2.5
1,144,562 - B158DRAFT_1107 0.42 +0.8
1,144,562 - B158DRAFT_1107 0.42 +0.6
1,144,592 - B158DRAFT_1107 0.48 -0.9
1,144,599 + B158DRAFT_1107 0.49 -1.8

Or see this region's nucleotide sequence