Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1069 and B158DRAFT_1070 are separated by 12 nucleotides B158DRAFT_1070 and B158DRAFT_1071 are separated by 11 nucleotides B158DRAFT_1071 and B158DRAFT_1072 are separated by 35 nucleotides
B158DRAFT_1069: B158DRAFT_1069 - succinyldiaminopimelate desuccinylase (EC 3.5.1.18), at 1,108,494 to 1,109,639
_1069
B158DRAFT_1070: B158DRAFT_1070 - transcriptional regulator, Spx/MgsR family, at 1,109,652 to 1,110,017
_1070
B158DRAFT_1071: B158DRAFT_1071 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 1,110,029 to 1,110,853
_1071
B158DRAFT_1072: B158DRAFT_1072 - UTP--GlnB (protein PII) uridylyltransferase, GlnD, at 1,110,889 to 1,113,537
_1072
Position (kb) 1110
1111 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1109.732 kb on - strand, within B158DRAFT_1070 at 1109.755 kb on - strand, within B158DRAFT_1070 at 1109.760 kb on - strand, within B158DRAFT_1070 at 1109.828 kb on - strand, within B158DRAFT_1070 at 1109.828 kb on - strand, within B158DRAFT_1070 at 1109.867 kb on - strand, within B158DRAFT_1070 at 1109.972 kb on + strand, within B158DRAFT_1070 at 1109.972 kb on + strand, within B158DRAFT_1070 at 1109.982 kb on - strand at 1110.005 kb on - strand at 1110.888 kb on - strand at 1111.795 kb on - strand, within B158DRAFT_1072
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,109,732 - B158DRAFT_1070 0.22 -0.2 1,109,755 - B158DRAFT_1070 0.28 -0.1 1,109,760 - B158DRAFT_1070 0.30 -0.4 1,109,828 - B158DRAFT_1070 0.48 -0.6 1,109,828 - B158DRAFT_1070 0.48 +0.2 1,109,867 - B158DRAFT_1070 0.59 -1.5 1,109,972 + B158DRAFT_1070 0.87 -0.3 1,109,972 + B158DRAFT_1070 0.87 -4.2 1,109,982 - -0.9 1,110,005 - -2.0 1,110,888 - -0.0 1,111,795 - B158DRAFT_1072 0.34 -1.2
Or see this region's nucleotide sequence