Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1062

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1060 and B158DRAFT_1061 are separated by 15 nucleotidesB158DRAFT_1061 and B158DRAFT_1062 are separated by 87 nucleotidesB158DRAFT_1062 and B158DRAFT_1063 are separated by 12 nucleotidesB158DRAFT_1063 and B158DRAFT_1064 are separated by 17 nucleotides B158DRAFT_1060: B158DRAFT_1060 - FOG: LysM repeat, at 1,100,886 to 1,102,430 _1060 B158DRAFT_1061: B158DRAFT_1061 - hydroxyacylglutathione hydrolase, at 1,102,446 to 1,103,246 _1061 B158DRAFT_1062: B158DRAFT_1062 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 1,103,334 to 1,104,053 _1062 B158DRAFT_1063: B158DRAFT_1063 - Ribonuclease HI, at 1,104,066 to 1,104,515 _1063 B158DRAFT_1064: B158DRAFT_1064 - DNA polymerase III, epsilon subunit, Proteobacterial, at 1,104,533 to 1,105,234 _1064 Position (kb) 1103 1104 1105Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5 6at 1102.387 kb on - strandat 1102.492 kb on + strandat 1102.492 kb on + strandat 1102.500 kb on - strandat 1102.500 kb on - strandat 1102.500 kb on - strandat 1102.528 kb on + strand, within B158DRAFT_1061at 1102.528 kb on + strand, within B158DRAFT_1061at 1102.544 kb on + strand, within B158DRAFT_1061at 1102.544 kb on + strand, within B158DRAFT_1061at 1102.552 kb on - strand, within B158DRAFT_1061at 1102.613 kb on + strand, within B158DRAFT_1061at 1102.620 kb on + strand, within B158DRAFT_1061at 1102.650 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.655 kb on + strand, within B158DRAFT_1061at 1102.663 kb on - strand, within B158DRAFT_1061at 1102.663 kb on - strand, within B158DRAFT_1061at 1102.663 kb on - strand, within B158DRAFT_1061at 1102.663 kb on - strand, within B158DRAFT_1061at 1102.698 kb on + strand, within B158DRAFT_1061at 1102.763 kb on - strand, within B158DRAFT_1061at 1102.797 kb on - strand, within B158DRAFT_1061at 1102.815 kb on - strand, within B158DRAFT_1061at 1102.821 kb on - strand, within B158DRAFT_1061at 1102.860 kb on + strand, within B158DRAFT_1061at 1102.885 kb on + strand, within B158DRAFT_1061at 1102.886 kb on - strand, within B158DRAFT_1061at 1102.966 kb on - strand, within B158DRAFT_1061at 1102.972 kb on - strand, within B158DRAFT_1061at 1103.009 kb on - strand, within B158DRAFT_1061at 1103.034 kb on + strand, within B158DRAFT_1061at 1103.034 kb on + strand, within B158DRAFT_1061at 1103.034 kb on + strand, within B158DRAFT_1061at 1103.034 kb on + strand, within B158DRAFT_1061at 1103.042 kb on - strand, within B158DRAFT_1061at 1103.097 kb on - strand, within B158DRAFT_1061at 1103.115 kb on + strand, within B158DRAFT_1061at 1103.123 kb on - strand, within B158DRAFT_1061at 1103.123 kb on - strand, within B158DRAFT_1061at 1103.130 kb on + strand, within B158DRAFT_1061at 1103.130 kb on + strand, within B158DRAFT_1061at 1103.130 kb on + strand, within B158DRAFT_1061at 1103.138 kb on - strand, within B158DRAFT_1061at 1103.138 kb on - strand, within B158DRAFT_1061at 1103.138 kb on - strand, within B158DRAFT_1061at 1103.216 kb on + strandat 1103.224 kb on - strandat 1103.253 kb on + strandat 1103.261 kb on - strandat 1103.264 kb on + strandat 1103.264 kb on + strandat 1103.264 kb on + strandat 1103.272 kb on + strandat 1103.272 kb on - strandat 1103.272 kb on - strandat 1103.272 kb on - strandat 1103.285 kb on - strandat 1103.306 kb on + strandat 1103.306 kb on + strandat 1103.314 kb on - strandat 1103.314 kb on - strandat 1103.338 kb on + strandat 1103.338 kb on + strandat 1103.346 kb on - strandat 1103.346 kb on - strandat 1103.346 kb on - strandat 1103.346 kb on - strandat 1103.454 kb on + strand, within B158DRAFT_1062at 1103.459 kb on + strand, within B158DRAFT_1062at 1103.462 kb on - strand, within B158DRAFT_1062at 1103.462 kb on - strand, within B158DRAFT_1062at 1103.462 kb on - strand, within B158DRAFT_1062at 1103.476 kb on + strand, within B158DRAFT_1062at 1103.476 kb on + strand, within B158DRAFT_1062at 1103.484 kb on - strand, within B158DRAFT_1062at 1103.484 kb on - strand, within B158DRAFT_1062at 1103.517 kb on - strand, within B158DRAFT_1062at 1103.519 kb on + strand, within B158DRAFT_1062at 1103.539 kb on + strand, within B158DRAFT_1062at 1103.565 kb on + strand, within B158DRAFT_1062at 1103.573 kb on + strand, within B158DRAFT_1062at 1103.610 kb on + strand, within B158DRAFT_1062at 1103.674 kb on + strand, within B158DRAFT_1062at 1103.690 kb on + strand, within B158DRAFT_1062at 1103.690 kb on + strand, within B158DRAFT_1062at 1103.690 kb on + strand, within B158DRAFT_1062at 1103.698 kb on - strand, within B158DRAFT_1062at 1103.698 kb on - strand, within B158DRAFT_1062at 1103.702 kb on + strand, within B158DRAFT_1062at 1103.702 kb on + strand, within B158DRAFT_1062at 1103.710 kb on - strand, within B158DRAFT_1062at 1103.716 kb on - strand, within B158DRAFT_1062at 1103.770 kb on + strand, within B158DRAFT_1062at 1103.770 kb on + strand, within B158DRAFT_1062at 1103.770 kb on + strand, within B158DRAFT_1062at 1103.770 kb on + strand, within B158DRAFT_1062at 1103.778 kb on - strand, within B158DRAFT_1062at 1103.859 kb on + strand, within B158DRAFT_1062at 1103.883 kb on + strand, within B158DRAFT_1062at 1103.883 kb on + strand, within B158DRAFT_1062at 1103.891 kb on - strand, within B158DRAFT_1062at 1103.905 kb on + strand, within B158DRAFT_1062at 1103.906 kb on - strand, within B158DRAFT_1062at 1103.935 kb on - strand, within B158DRAFT_1062at 1103.953 kb on - strand, within B158DRAFT_1062at 1103.999 kb on + strandat 1104.143 kb on - strand, within B158DRAFT_1063at 1104.143 kb on - strand, within B158DRAFT_1063at 1104.492 kb on + strandat 1104.523 kb on + strandat 1104.575 kb on - strandat 1104.575 kb on - strandat 1104.606 kb on + strand, within B158DRAFT_1064at 1104.617 kb on - strand, within B158DRAFT_1064at 1104.688 kb on - strand, within B158DRAFT_1064at 1104.690 kb on + strand, within B158DRAFT_1064at 1104.780 kb on + strand, within B158DRAFT_1064at 1104.780 kb on + strand, within B158DRAFT_1064at 1104.780 kb on + strand, within B158DRAFT_1064at 1104.780 kb on + strand, within B158DRAFT_1064at 1104.788 kb on - strand, within B158DRAFT_1064at 1104.884 kb on + strand, within B158DRAFT_1064at 1104.884 kb on + strand, within B158DRAFT_1064at 1104.884 kb on + strand, within B158DRAFT_1064at 1104.892 kb on - strand, within B158DRAFT_1064at 1104.899 kb on + strand, within B158DRAFT_1064at 1104.902 kb on - strand, within B158DRAFT_1064at 1104.904 kb on + strand, within B158DRAFT_1064at 1104.912 kb on - strand, within B158DRAFT_1064at 1104.912 kb on - strand, within B158DRAFT_1064at 1104.912 kb on - strand, within B158DRAFT_1064at 1104.926 kb on - strand, within B158DRAFT_1064at 1104.936 kb on + strand, within B158DRAFT_1064at 1104.949 kb on + strand, within B158DRAFT_1064at 1104.957 kb on - strand, within B158DRAFT_1064

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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1,102,387 - -1.8
1,102,492 + -0.7
1,102,492 + -0.8
1,102,500 - -0.4
1,102,500 - -2.0
1,102,500 - -0.2
1,102,528 + B158DRAFT_1061 0.10 -1.1
1,102,528 + B158DRAFT_1061 0.10 +1.9
1,102,544 + B158DRAFT_1061 0.12 +0.4
1,102,544 + B158DRAFT_1061 0.12 -0.4
1,102,552 - B158DRAFT_1061 0.13 -1.0
1,102,613 + B158DRAFT_1061 0.21 -0.1
1,102,620 + B158DRAFT_1061 0.22 -0.6
1,102,650 + B158DRAFT_1061 0.25 +1.4
1,102,655 + B158DRAFT_1061 0.26 +0.2
1,102,655 + B158DRAFT_1061 0.26 -0.2
1,102,655 + B158DRAFT_1061 0.26 +0.5
1,102,655 + B158DRAFT_1061 0.26 +1.8
1,102,655 + B158DRAFT_1061 0.26 -2.2
1,102,655 + B158DRAFT_1061 0.26 -3.0
1,102,655 + B158DRAFT_1061 0.26 -2.0
1,102,663 - B158DRAFT_1061 0.27 +0.6
1,102,663 - B158DRAFT_1061 0.27 +2.8
1,102,663 - B158DRAFT_1061 0.27 +0.8
1,102,663 - B158DRAFT_1061 0.27 +0.2
1,102,698 + B158DRAFT_1061 0.31 -0.7
1,102,763 - B158DRAFT_1061 0.40 -2.4
1,102,797 - B158DRAFT_1061 0.44 -1.5
1,102,815 - B158DRAFT_1061 0.46 -1.6
1,102,821 - B158DRAFT_1061 0.47 +1.0
1,102,860 + B158DRAFT_1061 0.52 -0.3
1,102,885 + B158DRAFT_1061 0.55 -1.0
1,102,886 - B158DRAFT_1061 0.55 +1.1
1,102,966 - B158DRAFT_1061 0.65 -0.4
1,102,972 - B158DRAFT_1061 0.66 -0.0
1,103,009 - B158DRAFT_1061 0.70 +0.7
1,103,034 + B158DRAFT_1061 0.73 -2.0
1,103,034 + B158DRAFT_1061 0.73 +1.2
1,103,034 + B158DRAFT_1061 0.73 -0.4
1,103,034 + B158DRAFT_1061 0.73 -0.8
1,103,042 - B158DRAFT_1061 0.74 -0.7
1,103,097 - B158DRAFT_1061 0.81 -1.1
1,103,115 + B158DRAFT_1061 0.84 -2.1
1,103,123 - B158DRAFT_1061 0.85 -1.2
1,103,123 - B158DRAFT_1061 0.85 +0.1
1,103,130 + B158DRAFT_1061 0.85 -0.2
1,103,130 + B158DRAFT_1061 0.85 -0.1
1,103,130 + B158DRAFT_1061 0.85 -1.1
1,103,138 - B158DRAFT_1061 0.86 -2.4
1,103,138 - B158DRAFT_1061 0.86 +1.0
1,103,138 - B158DRAFT_1061 0.86 -0.6
1,103,216 + +0.8
1,103,224 - -0.2
1,103,253 + +0.6
1,103,261 - +0.5
1,103,264 + +0.5
1,103,264 + +0.5
1,103,264 + -2.6
1,103,272 + -2.1
1,103,272 - +0.7
1,103,272 - +2.6
1,103,272 - +0.7
1,103,285 - +6.4
1,103,306 + +1.2
1,103,306 + -0.4
1,103,314 - -2.0
1,103,314 - -0.1
1,103,338 + -0.4
1,103,338 + -0.8
1,103,346 - -2.4
1,103,346 - -0.7
1,103,346 - +3.8
1,103,346 - +1.8
1,103,454 + B158DRAFT_1062 0.17 +0.0
1,103,459 + B158DRAFT_1062 0.17 +0.3
1,103,462 - B158DRAFT_1062 0.18 +0.1
1,103,462 - B158DRAFT_1062 0.18 +1.1
1,103,462 - B158DRAFT_1062 0.18 +1.6
1,103,476 + B158DRAFT_1062 0.20 +0.3
1,103,476 + B158DRAFT_1062 0.20 -0.8
1,103,484 - B158DRAFT_1062 0.21 -2.5
1,103,484 - B158DRAFT_1062 0.21 +2.4
1,103,517 - B158DRAFT_1062 0.25 -0.7
1,103,519 + B158DRAFT_1062 0.26 +1.7
1,103,539 + B158DRAFT_1062 0.28 +0.3
1,103,565 + B158DRAFT_1062 0.32 +0.0
1,103,573 + B158DRAFT_1062 0.33 +0.5
1,103,610 + B158DRAFT_1062 0.38 +1.1
1,103,674 + B158DRAFT_1062 0.47 +2.5
1,103,690 + B158DRAFT_1062 0.49 -1.7
1,103,690 + B158DRAFT_1062 0.49 +2.6
1,103,690 + B158DRAFT_1062 0.49 -0.3
1,103,698 - B158DRAFT_1062 0.51 +5.3
1,103,698 - B158DRAFT_1062 0.51 -1.3
1,103,702 + B158DRAFT_1062 0.51 -0.8
1,103,702 + B158DRAFT_1062 0.51 -2.7
1,103,710 - B158DRAFT_1062 0.52 -2.0
1,103,716 - B158DRAFT_1062 0.53 +5.0
1,103,770 + B158DRAFT_1062 0.61 -3.4
1,103,770 + B158DRAFT_1062 0.61 -0.1
1,103,770 + B158DRAFT_1062 0.61 +0.1
1,103,770 + B158DRAFT_1062 0.61 +0.3
1,103,778 - B158DRAFT_1062 0.62 -2.9
1,103,859 + B158DRAFT_1062 0.73 +0.9
1,103,883 + B158DRAFT_1062 0.76 -0.6
1,103,883 + B158DRAFT_1062 0.76 +1.2
1,103,891 - B158DRAFT_1062 0.77 -1.3
1,103,905 + B158DRAFT_1062 0.79 +0.6
1,103,906 - B158DRAFT_1062 0.79 +1.0
1,103,935 - B158DRAFT_1062 0.83 -1.7
1,103,953 - B158DRAFT_1062 0.86 +1.2
1,103,999 + -1.3
1,104,143 - B158DRAFT_1063 0.17 +0.1
1,104,143 - B158DRAFT_1063 0.17 +0.4
1,104,492 + +3.0
1,104,523 + -0.1
1,104,575 - -1.1
1,104,575 - -0.1
1,104,606 + B158DRAFT_1064 0.10 +0.6
1,104,617 - B158DRAFT_1064 0.12 +2.4
1,104,688 - B158DRAFT_1064 0.22 -1.2
1,104,690 + B158DRAFT_1064 0.22 +0.2
1,104,780 + B158DRAFT_1064 0.35 -1.9
1,104,780 + B158DRAFT_1064 0.35 +0.1
1,104,780 + B158DRAFT_1064 0.35 +1.8
1,104,780 + B158DRAFT_1064 0.35 +3.8
1,104,788 - B158DRAFT_1064 0.36 +2.4
1,104,884 + B158DRAFT_1064 0.50 +0.6
1,104,884 + B158DRAFT_1064 0.50 -1.4
1,104,884 + B158DRAFT_1064 0.50 +2.3
1,104,892 - B158DRAFT_1064 0.51 +1.7
1,104,899 + B158DRAFT_1064 0.52 +2.7
1,104,902 - B158DRAFT_1064 0.53 +0.9
1,104,904 + B158DRAFT_1064 0.53 +3.6
1,104,912 - B158DRAFT_1064 0.54 +4.0
1,104,912 - B158DRAFT_1064 0.54 -2.7
1,104,912 - B158DRAFT_1064 0.54 +0.8
1,104,926 - B158DRAFT_1064 0.56 -0.2
1,104,936 + B158DRAFT_1064 0.57 +1.8
1,104,949 + B158DRAFT_1064 0.59 +0.5
1,104,957 - B158DRAFT_1064 0.60 +1.8

Or see this region's nucleotide sequence