Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1038 and B158DRAFT_1039 are separated by 170 nucleotides B158DRAFT_1039 and B158DRAFT_1040 are separated by 13 nucleotides B158DRAFT_1040 and B158DRAFT_1041 are separated by 38 nucleotides B158DRAFT_1041 and B158DRAFT_1042 are separated by 190 nucleotides
B158DRAFT_1038: B158DRAFT_1038 - ATP-dependent protease La, at 1,076,908 to 1,079,316
_1038
B158DRAFT_1039: B158DRAFT_1039 - Bacterial nucleoid DNA-binding protein, at 1,079,487 to 1,079,759
_1039
B158DRAFT_1040: B158DRAFT_1040 - tRNA_Val_TAC, at 1,079,773 to 1,079,848
_1040
B158DRAFT_1041: B158DRAFT_1041 - tRNA_Asp_GTC, at 1,079,887 to 1,079,963
_1041
B158DRAFT_1042: B158DRAFT_1042 - Parvulin-like peptidyl-prolyl isomerase, at 1,080,154 to 1,082,070
_1042
Position (kb)
1079
1080 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7 at 1079.044 kb on + strand, within B158DRAFT_1038 at 1079.044 kb on + strand, within B158DRAFT_1038 at 1079.052 kb on - strand, within B158DRAFT_1038 at 1079.218 kb on - strand at 1079.220 kb on + strand at 1079.220 kb on + strand at 1079.228 kb on + strand at 1079.228 kb on - strand at 1079.228 kb on - strand at 1079.228 kb on - strand at 1079.228 kb on - strand at 1079.228 kb on - strand at 1079.249 kb on - strand at 1079.249 kb on - strand at 1079.249 kb on - strand at 1079.428 kb on - strand at 1079.534 kb on + strand, within B158DRAFT_1039 at 1079.534 kb on + strand, within B158DRAFT_1039 at 1079.542 kb on - strand, within B158DRAFT_1039 at 1079.640 kb on + strand, within B158DRAFT_1039 at 1079.640 kb on + strand, within B158DRAFT_1039 at 1079.648 kb on - strand, within B158DRAFT_1039 at 1079.696 kb on + strand, within B158DRAFT_1039 at 1079.704 kb on - strand, within B158DRAFT_1039 at 1079.836 kb on + strand, within B158DRAFT_1040 at 1079.836 kb on + strand, within B158DRAFT_1040 at 1079.867 kb on - strand at 1079.912 kb on - strand, within B158DRAFT_1041 at 1079.912 kb on - strand, within B158DRAFT_1041 at 1079.912 kb on - strand, within B158DRAFT_1041 at 1079.939 kb on + strand, within B158DRAFT_1041 at 1079.966 kb on + strand at 1080.006 kb on + strand at 1080.006 kb on + strand at 1080.006 kb on + strand at 1080.006 kb on + strand at 1080.012 kb on - strand at 1080.025 kb on + strand at 1080.025 kb on + strand at 1080.026 kb on - strand at 1080.033 kb on - strand at 1080.039 kb on - strand at 1080.167 kb on + strand at 1080.180 kb on - strand at 1080.261 kb on + strand at 1080.261 kb on + strand at 1080.264 kb on - strand at 1080.269 kb on - strand at 1080.292 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.306 kb on + strand at 1080.314 kb on - strand at 1080.314 kb on - strand at 1080.314 kb on - strand at 1080.314 kb on - strand at 1080.314 kb on - strand at 1080.340 kb on - strand at 1080.359 kb on - strand, within B158DRAFT_1042 at 1080.385 kb on + strand, within B158DRAFT_1042 at 1080.444 kb on + strand, within B158DRAFT_1042 at 1080.506 kb on + strand, within B158DRAFT_1042 at 1080.525 kb on + strand, within B158DRAFT_1042 at 1080.548 kb on + strand, within B158DRAFT_1042 at 1080.551 kb on - strand, within B158DRAFT_1042 at 1080.556 kb on - strand, within B158DRAFT_1042 at 1080.574 kb on + strand, within B158DRAFT_1042 at 1080.634 kb on - strand, within B158DRAFT_1042 at 1080.657 kb on - strand, within B158DRAFT_1042 at 1080.657 kb on - strand, within B158DRAFT_1042 at 1080.928 kb on + strand, within B158DRAFT_1042 at 1080.929 kb on - strand, within B158DRAFT_1042 at 1080.947 kb on + strand, within B158DRAFT_1042
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,079,044 + B158DRAFT_1038 0.89 +0.5 1,079,044 + B158DRAFT_1038 0.89 -1.4 1,079,052 - B158DRAFT_1038 0.89 -0.1 1,079,218 - -0.4 1,079,220 + -2.7 1,079,220 + -0.5 1,079,228 + +1.4 1,079,228 - -0.6 1,079,228 - +0.7 1,079,228 - +0.0 1,079,228 - +0.5 1,079,228 - +0.6 1,079,249 - -1.3 1,079,249 - -1.4 1,079,249 - -0.3 1,079,428 - -2.3 1,079,534 + B158DRAFT_1039 0.17 -1.5 1,079,534 + B158DRAFT_1039 0.17 -2.6 1,079,542 - B158DRAFT_1039 0.20 +0.2 1,079,640 + B158DRAFT_1039 0.56 -3.0 1,079,640 + B158DRAFT_1039 0.56 -1.5 1,079,648 - B158DRAFT_1039 0.59 -0.8 1,079,696 + B158DRAFT_1039 0.77 +0.2 1,079,704 - B158DRAFT_1039 0.79 -1.0 1,079,836 + B158DRAFT_1040 0.83 -0.0 1,079,836 + B158DRAFT_1040 0.83 +0.1 1,079,867 - -1.0 1,079,912 - B158DRAFT_1041 0.32 +1.0 1,079,912 - B158DRAFT_1041 0.32 -1.9 1,079,912 - B158DRAFT_1041 0.32 +3.2 1,079,939 + B158DRAFT_1041 0.68 -1.8 1,079,966 + +3.9 1,080,006 + -0.8 1,080,006 + -0.5 1,080,006 + +0.4 1,080,006 + -0.5 1,080,012 - -1.0 1,080,025 + +0.6 1,080,025 + +0.1 1,080,026 - +1.8 1,080,033 - +0.2 1,080,039 - -0.6 1,080,167 + -0.8 1,080,180 - +2.0 1,080,261 + -0.0 1,080,261 + -0.2 1,080,264 - +0.2 1,080,269 - -0.9 1,080,292 + -1.2 1,080,306 + -0.8 1,080,306 + +1.9 1,080,306 + +0.9 1,080,306 + -1.7 1,080,306 + +1.2 1,080,306 + +0.6 1,080,306 + +0.6 1,080,306 + -2.2 1,080,314 - -0.6 1,080,314 - -2.0 1,080,314 - -3.1 1,080,314 - -3.1 1,080,314 - -0.2 1,080,340 - -0.4 1,080,359 - B158DRAFT_1042 0.11 -1.2 1,080,385 + B158DRAFT_1042 0.12 -0.7 1,080,444 + B158DRAFT_1042 0.15 -3.1 1,080,506 + B158DRAFT_1042 0.18 -0.9 1,080,525 + B158DRAFT_1042 0.19 -0.4 1,080,548 + B158DRAFT_1042 0.21 +1.3 1,080,551 - B158DRAFT_1042 0.21 +1.8 1,080,556 - B158DRAFT_1042 0.21 +1.0 1,080,574 + B158DRAFT_1042 0.22 -2.3 1,080,634 - B158DRAFT_1042 0.25 -0.5 1,080,657 - B158DRAFT_1042 0.26 +7.4 1,080,657 - B158DRAFT_1042 0.26 -1.1 1,080,928 + B158DRAFT_1042 0.40 -1.1 1,080,929 - B158DRAFT_1042 0.40 -2.1 1,080,947 + B158DRAFT_1042 0.41 -0.3
Or see this region's nucleotide sequence