Experiment: motility
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1015 and B158DRAFT_1016 are separated by 28 nucleotides B158DRAFT_1016 and B158DRAFT_1017 are separated by 196 nucleotides B158DRAFT_1017 and B158DRAFT_1018 are separated by 19 nucleotides B158DRAFT_1018 and B158DRAFT_1019 overlap by 4 nucleotides
B158DRAFT_1015: B158DRAFT_1015 - Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA, at 1,056,924 to 1,057,568
_1015
B158DRAFT_1016: B158DRAFT_1016 - Peptidase E, at 1,057,597 to 1,058,319
_1016
B158DRAFT_1017: B158DRAFT_1017 - hypothetical protein, at 1,058,516 to 1,060,048
_1017
B158DRAFT_1018: B158DRAFT_1018 - Uncharacterized protein conserved in bacteria, at 1,060,068 to 1,060,634
_1018
B158DRAFT_1019: B158DRAFT_1019 - hypothetical protein, at 1,060,631 to 1,061,347
_1019
Position (kb)
1058
1059
1060
1061 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1057.549 kb on + strand at 1057.591 kb on + strand at 1057.599 kb on - strand at 1057.656 kb on - strand at 1057.661 kb on + strand at 1057.669 kb on - strand at 1057.677 kb on + strand, within B158DRAFT_1016 at 1057.738 kb on + strand, within B158DRAFT_1016 at 1057.739 kb on + strand, within B158DRAFT_1016 at 1057.749 kb on + strand, within B158DRAFT_1016 at 1057.759 kb on - strand, within B158DRAFT_1016 at 1057.844 kb on - strand, within B158DRAFT_1016 at 1057.914 kb on + strand, within B158DRAFT_1016 at 1057.914 kb on + strand, within B158DRAFT_1016 at 1057.958 kb on + strand, within B158DRAFT_1016 at 1057.981 kb on + strand, within B158DRAFT_1016 at 1057.989 kb on - strand, within B158DRAFT_1016 at 1058.032 kb on + strand, within B158DRAFT_1016 at 1058.046 kb on + strand, within B158DRAFT_1016 at 1058.054 kb on - strand, within B158DRAFT_1016 at 1058.085 kb on + strand, within B158DRAFT_1016 at 1058.093 kb on - strand, within B158DRAFT_1016 at 1058.257 kb on - strand at 1058.266 kb on + strand at 1058.282 kb on - strand at 1058.298 kb on - strand at 1058.345 kb on + strand at 1058.416 kb on + strand at 1058.421 kb on + strand at 1058.497 kb on + strand at 1058.505 kb on - strand at 1058.526 kb on + strand at 1058.526 kb on + strand at 1058.526 kb on + strand at 1058.526 kb on + strand at 1058.534 kb on - strand at 1058.534 kb on - strand at 1058.553 kb on + strand at 1058.558 kb on + strand at 1058.563 kb on + strand at 1058.566 kb on - strand at 1058.566 kb on - strand at 1058.571 kb on - strand at 1058.681 kb on - strand, within B158DRAFT_1017 at 1058.697 kb on + strand, within B158DRAFT_1017 at 1058.712 kb on + strand, within B158DRAFT_1017 at 1058.720 kb on + strand, within B158DRAFT_1017 at 1058.720 kb on - strand, within B158DRAFT_1017 at 1058.720 kb on - strand, within B158DRAFT_1017 at 1058.720 kb on - strand, within B158DRAFT_1017 at 1058.722 kb on + strand, within B158DRAFT_1017 at 1058.725 kb on - strand, within B158DRAFT_1017 at 1058.748 kb on - strand, within B158DRAFT_1017 at 1058.748 kb on - strand, within B158DRAFT_1017 at 1058.748 kb on - strand, within B158DRAFT_1017 at 1058.748 kb on - strand, within B158DRAFT_1017 at 1058.748 kb on - strand, within B158DRAFT_1017 at 1058.776 kb on - strand, within B158DRAFT_1017 at 1058.803 kb on + strand, within B158DRAFT_1017 at 1058.811 kb on - strand, within B158DRAFT_1017 at 1058.811 kb on - strand, within B158DRAFT_1017 at 1058.819 kb on - strand, within B158DRAFT_1017 at 1058.927 kb on - strand, within B158DRAFT_1017 at 1058.927 kb on - strand, within B158DRAFT_1017 at 1058.968 kb on + strand, within B158DRAFT_1017 at 1058.968 kb on + strand, within B158DRAFT_1017 at 1058.976 kb on - strand, within B158DRAFT_1017 at 1058.976 kb on - strand, within B158DRAFT_1017 at 1058.997 kb on + strand, within B158DRAFT_1017 at 1058.997 kb on + strand, within B158DRAFT_1017 at 1059.008 kb on + strand, within B158DRAFT_1017 at 1059.036 kb on - strand, within B158DRAFT_1017 at 1059.036 kb on - strand, within B158DRAFT_1017 at 1059.036 kb on - strand, within B158DRAFT_1017 at 1059.036 kb on - strand, within B158DRAFT_1017 at 1059.036 kb on - strand, within B158DRAFT_1017 at 1059.045 kb on + strand, within B158DRAFT_1017 at 1059.045 kb on + strand, within B158DRAFT_1017 at 1059.045 kb on + strand, within B158DRAFT_1017 at 1059.053 kb on - strand, within B158DRAFT_1017 at 1059.053 kb on - strand, within B158DRAFT_1017 at 1059.053 kb on - strand, within B158DRAFT_1017 at 1059.100 kb on - strand, within B158DRAFT_1017 at 1059.107 kb on - strand, within B158DRAFT_1017 at 1059.109 kb on + strand, within B158DRAFT_1017 at 1059.128 kb on - strand, within B158DRAFT_1017 at 1059.173 kb on + strand, within B158DRAFT_1017 at 1059.173 kb on + strand, within B158DRAFT_1017 at 1059.203 kb on - strand, within B158DRAFT_1017 at 1059.214 kb on - strand, within B158DRAFT_1017 at 1059.222 kb on - strand, within B158DRAFT_1017 at 1059.224 kb on + strand, within B158DRAFT_1017 at 1059.272 kb on - strand, within B158DRAFT_1017 at 1059.339 kb on + strand, within B158DRAFT_1017 at 1059.345 kb on + strand, within B158DRAFT_1017 at 1059.353 kb on - strand, within B158DRAFT_1017 at 1059.356 kb on + strand, within B158DRAFT_1017 at 1059.356 kb on + strand, within B158DRAFT_1017 at 1059.356 kb on + strand, within B158DRAFT_1017 at 1059.356 kb on + strand, within B158DRAFT_1017 at 1059.356 kb on + strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.364 kb on - strand, within B158DRAFT_1017 at 1059.403 kb on + strand, within B158DRAFT_1017 at 1059.403 kb on - strand, within B158DRAFT_1017 at 1059.412 kb on - strand, within B158DRAFT_1017 at 1059.474 kb on - strand, within B158DRAFT_1017 at 1059.487 kb on + strand, within B158DRAFT_1017 at 1059.490 kb on - strand, within B158DRAFT_1017 at 1059.495 kb on - strand, within B158DRAFT_1017 at 1059.505 kb on + strand, within B158DRAFT_1017 at 1059.537 kb on - strand, within B158DRAFT_1017 at 1059.548 kb on + strand, within B158DRAFT_1017 at 1059.602 kb on - strand, within B158DRAFT_1017 at 1059.615 kb on - strand, within B158DRAFT_1017 at 1059.622 kb on - strand, within B158DRAFT_1017 at 1059.629 kb on + strand, within B158DRAFT_1017 at 1059.634 kb on + strand, within B158DRAFT_1017 at 1059.637 kb on - strand, within B158DRAFT_1017 at 1059.637 kb on - strand, within B158DRAFT_1017 at 1059.703 kb on + strand, within B158DRAFT_1017 at 1059.716 kb on + strand, within B158DRAFT_1017 at 1059.724 kb on - strand, within B158DRAFT_1017 at 1059.724 kb on - strand, within B158DRAFT_1017 at 1059.755 kb on + strand, within B158DRAFT_1017 at 1059.763 kb on - strand, within B158DRAFT_1017 at 1059.793 kb on + strand, within B158DRAFT_1017 at 1059.801 kb on - strand, within B158DRAFT_1017 at 1059.809 kb on - strand, within B158DRAFT_1017 at 1059.843 kb on + strand, within B158DRAFT_1017 at 1059.908 kb on + strand at 1059.938 kb on + strand at 1059.946 kb on - strand at 1059.951 kb on - strand at 1059.951 kb on - strand at 1059.994 kb on + strand at 1060.002 kb on - strand at 1060.095 kb on + strand at 1060.095 kb on + strand at 1060.095 kb on + strand at 1060.095 kb on + strand at 1060.095 kb on + strand at 1060.103 kb on - strand at 1060.103 kb on - strand at 1060.103 kb on - strand at 1060.103 kb on - strand at 1060.103 kb on - strand at 1060.123 kb on + strand at 1060.123 kb on + strand at 1060.133 kb on + strand, within B158DRAFT_1018 at 1060.141 kb on - strand, within B158DRAFT_1018 at 1060.266 kb on + strand, within B158DRAFT_1018 at 1060.293 kb on - strand, within B158DRAFT_1018 at 1060.343 kb on + strand, within B158DRAFT_1018 at 1060.358 kb on - strand, within B158DRAFT_1018 at 1060.358 kb on - strand, within B158DRAFT_1018 at 1060.360 kb on + strand, within B158DRAFT_1018 at 1060.360 kb on + strand, within B158DRAFT_1018 at 1060.368 kb on - strand, within B158DRAFT_1018 at 1060.368 kb on - strand, within B158DRAFT_1018 at 1060.368 kb on - strand, within B158DRAFT_1018 at 1060.368 kb on - strand, within B158DRAFT_1018 at 1060.457 kb on - strand, within B158DRAFT_1018 at 1060.457 kb on - strand, within B158DRAFT_1018 at 1060.523 kb on + strand, within B158DRAFT_1018 at 1060.582 kb on - strand at 1060.592 kb on - strand at 1060.671 kb on - strand at 1060.772 kb on + strand, within B158DRAFT_1019 at 1060.778 kb on + strand, within B158DRAFT_1019 at 1060.888 kb on + strand, within B158DRAFT_1019 at 1060.942 kb on + strand, within B158DRAFT_1019
Per-strain Table
Position Strand Gene LocusTag Fraction motility remove 1,057,549 + -1.2 1,057,591 + +0.1 1,057,599 - -0.4 1,057,656 - +0.9 1,057,661 + +0.4 1,057,669 - +3.2 1,057,677 + B158DRAFT_1016 0.11 -1.3 1,057,738 + B158DRAFT_1016 0.20 -1.8 1,057,739 + B158DRAFT_1016 0.20 +0.1 1,057,749 + B158DRAFT_1016 0.21 +0.7 1,057,759 - B158DRAFT_1016 0.22 +0.4 1,057,844 - B158DRAFT_1016 0.34 +0.0 1,057,914 + B158DRAFT_1016 0.44 -1.0 1,057,914 + B158DRAFT_1016 0.44 +0.6 1,057,958 + B158DRAFT_1016 0.50 +1.4 1,057,981 + B158DRAFT_1016 0.53 -2.6 1,057,989 - B158DRAFT_1016 0.54 -0.3 1,058,032 + B158DRAFT_1016 0.60 -1.9 1,058,046 + B158DRAFT_1016 0.62 +0.0 1,058,054 - B158DRAFT_1016 0.63 -3.7 1,058,085 + B158DRAFT_1016 0.67 -0.4 1,058,093 - B158DRAFT_1016 0.69 -0.6 1,058,257 - +0.1 1,058,266 + +0.0 1,058,282 - +2.1 1,058,298 - -3.3 1,058,345 + +0.0 1,058,416 + +4.2 1,058,421 + +3.2 1,058,497 + -2.0 1,058,505 - +0.0 1,058,526 + -2.0 1,058,526 + -0.3 1,058,526 + -0.9 1,058,526 + -1.7 1,058,534 - +0.3 1,058,534 - -1.8 1,058,553 + -1.3 1,058,558 + -0.5 1,058,563 + -0.3 1,058,566 - +0.8 1,058,566 - -1.1 1,058,571 - +0.9 1,058,681 - B158DRAFT_1017 0.11 +0.2 1,058,697 + B158DRAFT_1017 0.12 -0.0 1,058,712 + B158DRAFT_1017 0.13 +2.2 1,058,720 + B158DRAFT_1017 0.13 +2.4 1,058,720 - B158DRAFT_1017 0.13 +0.6 1,058,720 - B158DRAFT_1017 0.13 -0.4 1,058,720 - B158DRAFT_1017 0.13 -2.3 1,058,722 + B158DRAFT_1017 0.13 -0.0 1,058,725 - B158DRAFT_1017 0.14 -0.3 1,058,748 - B158DRAFT_1017 0.15 +2.6 1,058,748 - B158DRAFT_1017 0.15 +0.6 1,058,748 - B158DRAFT_1017 0.15 +0.9 1,058,748 - B158DRAFT_1017 0.15 +0.2 1,058,748 - B158DRAFT_1017 0.15 +2.3 1,058,776 - B158DRAFT_1017 0.17 -1.6 1,058,803 + B158DRAFT_1017 0.19 -1.4 1,058,811 - B158DRAFT_1017 0.19 -0.4 1,058,811 - B158DRAFT_1017 0.19 -1.1 1,058,819 - B158DRAFT_1017 0.20 -1.6 1,058,927 - B158DRAFT_1017 0.27 -0.2 1,058,927 - B158DRAFT_1017 0.27 +0.4 1,058,968 + B158DRAFT_1017 0.29 +0.2 1,058,968 + B158DRAFT_1017 0.29 -1.1 1,058,976 - B158DRAFT_1017 0.30 -1.8 1,058,976 - B158DRAFT_1017 0.30 -0.4 1,058,997 + B158DRAFT_1017 0.31 -0.2 1,058,997 + B158DRAFT_1017 0.31 -0.9 1,059,008 + B158DRAFT_1017 0.32 -0.1 1,059,036 - B158DRAFT_1017 0.34 -0.9 1,059,036 - B158DRAFT_1017 0.34 +0.4 1,059,036 - B158DRAFT_1017 0.34 +1.3 1,059,036 - B158DRAFT_1017 0.34 -3.2 1,059,036 - B158DRAFT_1017 0.34 -2.2 1,059,045 + B158DRAFT_1017 0.35 +0.3 1,059,045 + B158DRAFT_1017 0.35 -0.2 1,059,045 + B158DRAFT_1017 0.35 -0.3 1,059,053 - B158DRAFT_1017 0.35 -1.1 1,059,053 - B158DRAFT_1017 0.35 -1.3 1,059,053 - B158DRAFT_1017 0.35 -0.9 1,059,100 - B158DRAFT_1017 0.38 +0.7 1,059,107 - B158DRAFT_1017 0.39 +1.1 1,059,109 + B158DRAFT_1017 0.39 -0.2 1,059,128 - B158DRAFT_1017 0.40 -0.8 1,059,173 + B158DRAFT_1017 0.43 -0.7 1,059,173 + B158DRAFT_1017 0.43 +0.5 1,059,203 - B158DRAFT_1017 0.45 -0.5 1,059,214 - B158DRAFT_1017 0.46 +3.2 1,059,222 - B158DRAFT_1017 0.46 +0.5 1,059,224 + B158DRAFT_1017 0.46 -1.2 1,059,272 - B158DRAFT_1017 0.49 +1.0 1,059,339 + B158DRAFT_1017 0.54 -1.1 1,059,345 + B158DRAFT_1017 0.54 -0.5 1,059,353 - B158DRAFT_1017 0.55 -1.2 1,059,356 + B158DRAFT_1017 0.55 +0.4 1,059,356 + B158DRAFT_1017 0.55 +0.4 1,059,356 + B158DRAFT_1017 0.55 -0.9 1,059,356 + B158DRAFT_1017 0.55 -0.2 1,059,356 + B158DRAFT_1017 0.55 +0.8 1,059,364 - B158DRAFT_1017 0.55 +0.2 1,059,364 - B158DRAFT_1017 0.55 -2.8 1,059,364 - B158DRAFT_1017 0.55 +3.0 1,059,364 - B158DRAFT_1017 0.55 -1.4 1,059,364 - B158DRAFT_1017 0.55 -0.3 1,059,364 - B158DRAFT_1017 0.55 -2.8 1,059,364 - B158DRAFT_1017 0.55 -0.6 1,059,364 - B158DRAFT_1017 0.55 -0.3 1,059,403 + B158DRAFT_1017 0.58 +1.3 1,059,403 - B158DRAFT_1017 0.58 +1.4 1,059,412 - B158DRAFT_1017 0.58 +0.5 1,059,474 - B158DRAFT_1017 0.62 +0.1 1,059,487 + B158DRAFT_1017 0.63 -2.6 1,059,490 - B158DRAFT_1017 0.64 -1.4 1,059,495 - B158DRAFT_1017 0.64 +0.0 1,059,505 + B158DRAFT_1017 0.65 -0.2 1,059,537 - B158DRAFT_1017 0.67 +1.4 1,059,548 + B158DRAFT_1017 0.67 -0.7 1,059,602 - B158DRAFT_1017 0.71 -0.2 1,059,615 - B158DRAFT_1017 0.72 -0.7 1,059,622 - B158DRAFT_1017 0.72 +1.4 1,059,629 + B158DRAFT_1017 0.73 +0.8 1,059,634 + B158DRAFT_1017 0.73 +0.9 1,059,637 - B158DRAFT_1017 0.73 -0.2 1,059,637 - B158DRAFT_1017 0.73 -0.5 1,059,703 + B158DRAFT_1017 0.77 +0.3 1,059,716 + B158DRAFT_1017 0.78 -0.6 1,059,724 - B158DRAFT_1017 0.79 +0.9 1,059,724 - B158DRAFT_1017 0.79 -0.3 1,059,755 + B158DRAFT_1017 0.81 -1.5 1,059,763 - B158DRAFT_1017 0.81 -1.2 1,059,793 + B158DRAFT_1017 0.83 +1.0 1,059,801 - B158DRAFT_1017 0.84 +0.9 1,059,809 - B158DRAFT_1017 0.84 +3.8 1,059,843 + B158DRAFT_1017 0.87 -0.1 1,059,908 + +0.2 1,059,938 + +3.0 1,059,946 - +1.2 1,059,951 - +0.2 1,059,951 - +0.7 1,059,994 + +0.2 1,060,002 - -1.0 1,060,095 + -2.1 1,060,095 + +1.9 1,060,095 + -1.1 1,060,095 + -0.5 1,060,095 + -0.8 1,060,103 - -1.2 1,060,103 - -0.1 1,060,103 - +0.5 1,060,103 - +1.6 1,060,103 - -2.0 1,060,123 + -0.1 1,060,123 + -1.1 1,060,133 + B158DRAFT_1018 0.11 -1.0 1,060,141 - B158DRAFT_1018 0.13 +1.1 1,060,266 + B158DRAFT_1018 0.35 +0.6 1,060,293 - B158DRAFT_1018 0.40 +1.4 1,060,343 + B158DRAFT_1018 0.49 -1.2 1,060,358 - B158DRAFT_1018 0.51 +1.9 1,060,358 - B158DRAFT_1018 0.51 -1.1 1,060,360 + B158DRAFT_1018 0.51 -1.1 1,060,360 + B158DRAFT_1018 0.51 +0.3 1,060,368 - B158DRAFT_1018 0.53 -2.2 1,060,368 - B158DRAFT_1018 0.53 +0.5 1,060,368 - B158DRAFT_1018 0.53 +0.6 1,060,368 - B158DRAFT_1018 0.53 +1.8 1,060,457 - B158DRAFT_1018 0.69 +0.0 1,060,457 - B158DRAFT_1018 0.69 -0.3 1,060,523 + B158DRAFT_1018 0.80 +0.5 1,060,582 - -0.8 1,060,592 - -0.7 1,060,671 - -0.8 1,060,772 + B158DRAFT_1019 0.20 -1.8 1,060,778 + B158DRAFT_1019 0.21 -0.3 1,060,888 + B158DRAFT_1019 0.36 +0.2 1,060,942 + B158DRAFT_1019 0.43 +0.4
Or see this region's nucleotide sequence