Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0351

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0350 and B158DRAFT_0351 are separated by 125 nucleotidesB158DRAFT_0351 and B158DRAFT_0352 are separated by 53 nucleotides B158DRAFT_0350: B158DRAFT_0350 - Predicted exporters of the RND superfamily, at 349,914 to 352,427 _0350 B158DRAFT_0351: B158DRAFT_0351 - Zn-dependent hydrolases, including glyoxylases, at 352,553 to 353,416 _0351 B158DRAFT_0352: B158DRAFT_0352 - ATP-dependent DNA helicase Rep (EC 3.6.1.-), at 353,470 to 355,536 _0352 Position (kb) 352 353 354Strain fitness (log2 ratio) -2 -1 0 1 2 3at 351.642 kb on - strand, within B158DRAFT_0350at 351.718 kb on - strand, within B158DRAFT_0350at 351.730 kb on + strand, within B158DRAFT_0350at 351.861 kb on - strand, within B158DRAFT_0350at 351.875 kb on - strand, within B158DRAFT_0350at 351.898 kb on - strand, within B158DRAFT_0350at 352.092 kb on - strand, within B158DRAFT_0350at 352.129 kb on + strand, within B158DRAFT_0350at 352.287 kb on + strandat 352.390 kb on + strandat 352.415 kb on + strandat 352.432 kb on + strandat 352.519 kb on + strandat 352.522 kb on - strandat 352.586 kb on - strandat 352.620 kb on - strandat 352.660 kb on - strand, within B158DRAFT_0351at 352.758 kb on + strand, within B158DRAFT_0351at 352.766 kb on - strand, within B158DRAFT_0351at 352.794 kb on + strand, within B158DRAFT_0351at 352.800 kb on - strand, within B158DRAFT_0351at 352.801 kb on + strand, within B158DRAFT_0351at 352.836 kb on + strand, within B158DRAFT_0351at 352.844 kb on - strand, within B158DRAFT_0351at 352.852 kb on - strand, within B158DRAFT_0351at 352.918 kb on + strand, within B158DRAFT_0351at 352.918 kb on + strand, within B158DRAFT_0351at 352.925 kb on + strand, within B158DRAFT_0351at 352.925 kb on + strand, within B158DRAFT_0351at 352.925 kb on + strand, within B158DRAFT_0351at 352.925 kb on + strand, within B158DRAFT_0351at 352.926 kb on - strand, within B158DRAFT_0351at 352.926 kb on - strand, within B158DRAFT_0351at 352.926 kb on - strand, within B158DRAFT_0351at 352.926 kb on - strand, within B158DRAFT_0351at 352.933 kb on - strand, within B158DRAFT_0351at 352.965 kb on + strand, within B158DRAFT_0351at 352.973 kb on - strand, within B158DRAFT_0351at 352.983 kb on - strand, within B158DRAFT_0351at 353.011 kb on + strand, within B158DRAFT_0351at 353.038 kb on + strand, within B158DRAFT_0351at 353.196 kb on + strand, within B158DRAFT_0351at 353.305 kb on + strand, within B158DRAFT_0351at 353.305 kb on + strand, within B158DRAFT_0351at 353.305 kb on + strand, within B158DRAFT_0351at 353.313 kb on - strand, within B158DRAFT_0351at 353.313 kb on - strand, within B158DRAFT_0351at 353.313 kb on - strand, within B158DRAFT_0351at 353.342 kb on - strandat 353.413 kb on - strandat 353.435 kb on - strandat 353.522 kb on - strandat 353.572 kb on + strandat 353.572 kb on + strandat 353.595 kb on - strandat 353.718 kb on + strand, within B158DRAFT_0352at 353.723 kb on + strand, within B158DRAFT_0352at 353.752 kb on + strand, within B158DRAFT_0352at 353.761 kb on + strand, within B158DRAFT_0352at 353.761 kb on - strand, within B158DRAFT_0352at 353.782 kb on + strand, within B158DRAFT_0352at 353.857 kb on + strand, within B158DRAFT_0352at 353.857 kb on + strand, within B158DRAFT_0352at 353.857 kb on + strand, within B158DRAFT_0352at 353.857 kb on + strand, within B158DRAFT_0352at 353.857 kb on + strand, within B158DRAFT_0352at 353.870 kb on - strand, within B158DRAFT_0352at 353.916 kb on + strand, within B158DRAFT_0352at 353.921 kb on + strand, within B158DRAFT_0352at 353.929 kb on - strand, within B158DRAFT_0352at 354.011 kb on + strand, within B158DRAFT_0352at 354.011 kb on + strand, within B158DRAFT_0352at 354.011 kb on + strand, within B158DRAFT_0352at 354.011 kb on + strand, within B158DRAFT_0352at 354.019 kb on - strand, within B158DRAFT_0352at 354.050 kb on + strand, within B158DRAFT_0352at 354.086 kb on + strand, within B158DRAFT_0352at 354.196 kb on - strand, within B158DRAFT_0352at 354.259 kb on + strand, within B158DRAFT_0352at 354.343 kb on - strand, within B158DRAFT_0352

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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351,642 - B158DRAFT_0350 0.69 +0.7
351,718 - B158DRAFT_0350 0.72 -1.7
351,730 + B158DRAFT_0350 0.72 +1.7
351,861 - B158DRAFT_0350 0.77 +2.7
351,875 - B158DRAFT_0350 0.78 -1.2
351,898 - B158DRAFT_0350 0.79 -2.7
352,092 - B158DRAFT_0350 0.87 +1.0
352,129 + B158DRAFT_0350 0.88 +0.3
352,287 + +1.2
352,390 + +0.4
352,415 + +0.5
352,432 + -1.3
352,519 + -1.9
352,522 - -1.9
352,586 - -2.3
352,620 - -0.5
352,660 - B158DRAFT_0351 0.12 -1.4
352,758 + B158DRAFT_0351 0.24 -1.1
352,766 - B158DRAFT_0351 0.25 -0.3
352,794 + B158DRAFT_0351 0.28 -0.7
352,800 - B158DRAFT_0351 0.29 -2.5
352,801 + B158DRAFT_0351 0.29 -1.9
352,836 + B158DRAFT_0351 0.33 -0.6
352,844 - B158DRAFT_0351 0.34 +1.5
352,852 - B158DRAFT_0351 0.35 +2.4
352,918 + B158DRAFT_0351 0.42 +0.2
352,918 + B158DRAFT_0351 0.42 +1.1
352,925 + B158DRAFT_0351 0.43 -1.5
352,925 + B158DRAFT_0351 0.43 -0.7
352,925 + B158DRAFT_0351 0.43 -0.1
352,925 + B158DRAFT_0351 0.43 +0.7
352,926 - B158DRAFT_0351 0.43 -1.6
352,926 - B158DRAFT_0351 0.43 +0.9
352,926 - B158DRAFT_0351 0.43 +2.6
352,926 - B158DRAFT_0351 0.43 +2.6
352,933 - B158DRAFT_0351 0.44 -0.2
352,965 + B158DRAFT_0351 0.48 -1.1
352,973 - B158DRAFT_0351 0.49 -0.3
352,983 - B158DRAFT_0351 0.50 -0.2
353,011 + B158DRAFT_0351 0.53 +1.0
353,038 + B158DRAFT_0351 0.56 +0.8
353,196 + B158DRAFT_0351 0.74 -0.7
353,305 + B158DRAFT_0351 0.87 -1.3
353,305 + B158DRAFT_0351 0.87 +0.6
353,305 + B158DRAFT_0351 0.87 -1.3
353,313 - B158DRAFT_0351 0.88 -0.6
353,313 - B158DRAFT_0351 0.88 -2.2
353,313 - B158DRAFT_0351 0.88 -0.5
353,342 - +1.2
353,413 - +0.7
353,435 - -0.6
353,522 - -2.3
353,572 + -0.7
353,572 + -0.6
353,595 - +1.7
353,718 + B158DRAFT_0352 0.12 -2.1
353,723 + B158DRAFT_0352 0.12 -2.7
353,752 + B158DRAFT_0352 0.14 +0.4
353,761 + B158DRAFT_0352 0.14 -0.3
353,761 - B158DRAFT_0352 0.14 +2.3
353,782 + B158DRAFT_0352 0.15 +0.9
353,857 + B158DRAFT_0352 0.19 -0.3
353,857 + B158DRAFT_0352 0.19 +2.9
353,857 + B158DRAFT_0352 0.19 +0.2
353,857 + B158DRAFT_0352 0.19 +0.7
353,857 + B158DRAFT_0352 0.19 -0.8
353,870 - B158DRAFT_0352 0.19 -1.3
353,916 + B158DRAFT_0352 0.22 +0.1
353,921 + B158DRAFT_0352 0.22 -1.7
353,929 - B158DRAFT_0352 0.22 +1.8
354,011 + B158DRAFT_0352 0.26 -2.2
354,011 + B158DRAFT_0352 0.26 +1.1
354,011 + B158DRAFT_0352 0.26 -2.5
354,011 + B158DRAFT_0352 0.26 -2.7
354,019 - B158DRAFT_0352 0.27 -2.0
354,050 + B158DRAFT_0352 0.28 +1.1
354,086 + B158DRAFT_0352 0.30 -1.9
354,196 - B158DRAFT_0352 0.35 +3.1
354,259 + B158DRAFT_0352 0.38 +0.8
354,343 - B158DRAFT_0352 0.42 -1.1

Or see this region's nucleotide sequence