Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0230

Experiment: motility

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0229 and B158DRAFT_0230 are separated by 131 nucleotidesB158DRAFT_0230 and B158DRAFT_0231 are separated by 56 nucleotides B158DRAFT_0229: B158DRAFT_0229 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 233,428 to 234,531 _0229 B158DRAFT_0230: B158DRAFT_0230 - hypothetical protein, at 234,663 to 235,394 _0230 B158DRAFT_0231: B158DRAFT_0231 - hypothetical protein, at 235,451 to 236,239 _0231 Position (kb) 234 235 236Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4 5at 233.672 kb on + strand, within B158DRAFT_0229at 233.707 kb on - strand, within B158DRAFT_0229at 233.778 kb on - strand, within B158DRAFT_0229at 233.816 kb on + strand, within B158DRAFT_0229at 233.816 kb on + strand, within B158DRAFT_0229at 233.816 kb on + strand, within B158DRAFT_0229at 233.849 kb on + strand, within B158DRAFT_0229at 233.877 kb on - strand, within B158DRAFT_0229at 233.893 kb on + strand, within B158DRAFT_0229at 233.941 kb on + strand, within B158DRAFT_0229at 233.941 kb on + strand, within B158DRAFT_0229at 233.949 kb on - strand, within B158DRAFT_0229at 233.961 kb on + strand, within B158DRAFT_0229at 233.969 kb on - strand, within B158DRAFT_0229at 234.070 kb on + strand, within B158DRAFT_0229at 234.078 kb on - strand, within B158DRAFT_0229at 234.125 kb on - strand, within B158DRAFT_0229at 234.160 kb on - strand, within B158DRAFT_0229at 234.231 kb on - strand, within B158DRAFT_0229at 234.231 kb on - strand, within B158DRAFT_0229at 234.231 kb on - strand, within B158DRAFT_0229at 234.236 kb on - strand, within B158DRAFT_0229at 234.241 kb on - strand, within B158DRAFT_0229at 234.264 kb on - strand, within B158DRAFT_0229at 234.314 kb on + strand, within B158DRAFT_0229at 234.314 kb on + strand, within B158DRAFT_0229at 234.314 kb on + strand, within B158DRAFT_0229at 234.322 kb on - strand, within B158DRAFT_0229at 234.322 kb on - strand, within B158DRAFT_0229at 234.322 kb on - strand, within B158DRAFT_0229at 234.322 kb on - strand, within B158DRAFT_0229at 234.322 kb on - strand, within B158DRAFT_0229at 234.322 kb on - strand, within B158DRAFT_0229at 234.327 kb on - strand, within B158DRAFT_0229at 234.345 kb on + strand, within B158DRAFT_0229at 234.345 kb on + strand, within B158DRAFT_0229at 234.357 kb on + strand, within B158DRAFT_0229at 234.357 kb on + strand, within B158DRAFT_0229at 234.357 kb on + strand, within B158DRAFT_0229at 234.586 kb on + strandat 234.604 kb on - strandat 234.604 kb on - strandat 234.604 kb on - strandat 234.754 kb on + strand, within B158DRAFT_0230at 234.764 kb on + strand, within B158DRAFT_0230at 234.804 kb on + strand, within B158DRAFT_0230at 234.812 kb on - strand, within B158DRAFT_0230at 234.812 kb on - strand, within B158DRAFT_0230at 234.862 kb on + strand, within B158DRAFT_0230at 234.877 kb on + strand, within B158DRAFT_0230at 234.885 kb on - strand, within B158DRAFT_0230at 234.885 kb on - strand, within B158DRAFT_0230at 234.973 kb on + strand, within B158DRAFT_0230at 235.068 kb on + strand, within B158DRAFT_0230at 235.068 kb on + strand, within B158DRAFT_0230at 235.068 kb on + strand, within B158DRAFT_0230at 235.068 kb on + strand, within B158DRAFT_0230at 235.068 kb on + strand, within B158DRAFT_0230at 235.068 kb on + strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.076 kb on - strand, within B158DRAFT_0230at 235.114 kb on + strand, within B158DRAFT_0230at 235.125 kb on + strand, within B158DRAFT_0230at 235.125 kb on + strand, within B158DRAFT_0230at 235.125 kb on + strand, within B158DRAFT_0230at 235.133 kb on - strand, within B158DRAFT_0230at 235.133 kb on - strand, within B158DRAFT_0230at 235.133 kb on - strand, within B158DRAFT_0230at 235.142 kb on + strand, within B158DRAFT_0230at 235.233 kb on - strand, within B158DRAFT_0230at 235.238 kb on - strand, within B158DRAFT_0230at 235.321 kb on + strandat 235.339 kb on - strandat 235.352 kb on + strandat 235.358 kb on - strandat 235.511 kb on + strandat 235.516 kb on + strandat 235.519 kb on - strandat 235.674 kb on + strand, within B158DRAFT_0231at 235.679 kb on + strand, within B158DRAFT_0231at 235.744 kb on + strand, within B158DRAFT_0231at 235.752 kb on - strand, within B158DRAFT_0231at 235.764 kb on + strand, within B158DRAFT_0231at 235.779 kb on - strand, within B158DRAFT_0231at 235.779 kb on - strand, within B158DRAFT_0231at 235.783 kb on + strand, within B158DRAFT_0231at 235.786 kb on - strand, within B158DRAFT_0231at 235.791 kb on - strand, within B158DRAFT_0231at 235.791 kb on - strand, within B158DRAFT_0231at 235.880 kb on + strand, within B158DRAFT_0231at 235.880 kb on + strand, within B158DRAFT_0231at 235.931 kb on - strand, within B158DRAFT_0231at 235.937 kb on - strand, within B158DRAFT_0231at 235.991 kb on - strand, within B158DRAFT_0231at 236.025 kb on + strand, within B158DRAFT_0231at 236.025 kb on + strand, within B158DRAFT_0231at 236.025 kb on + strand, within B158DRAFT_0231at 236.025 kb on + strand, within B158DRAFT_0231at 236.025 kb on + strand, within B158DRAFT_0231at 236.031 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.033 kb on - strand, within B158DRAFT_0231at 236.053 kb on + strand, within B158DRAFT_0231at 236.053 kb on + strand, within B158DRAFT_0231at 236.061 kb on - strand, within B158DRAFT_0231at 236.150 kb on + strand, within B158DRAFT_0231at 236.171 kb on - strandat 236.191 kb on + strandat 236.191 kb on + strandat 236.193 kb on + strandat 236.199 kb on - strandat 236.204 kb on - strandat 236.222 kb on - strandat 236.308 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction motility
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233,672 + B158DRAFT_0229 0.22 -0.1
233,707 - B158DRAFT_0229 0.25 -0.6
233,778 - B158DRAFT_0229 0.32 -1.9
233,816 + B158DRAFT_0229 0.35 -0.8
233,816 + B158DRAFT_0229 0.35 +0.8
233,816 + B158DRAFT_0229 0.35 -1.2
233,849 + B158DRAFT_0229 0.38 -1.9
233,877 - B158DRAFT_0229 0.41 -1.9
233,893 + B158DRAFT_0229 0.42 -0.8
233,941 + B158DRAFT_0229 0.46 -0.8
233,941 + B158DRAFT_0229 0.46 +0.1
233,949 - B158DRAFT_0229 0.47 -0.8
233,961 + B158DRAFT_0229 0.48 -0.3
233,969 - B158DRAFT_0229 0.49 -1.4
234,070 + B158DRAFT_0229 0.58 -1.4
234,078 - B158DRAFT_0229 0.59 -0.3
234,125 - B158DRAFT_0229 0.63 -0.0
234,160 - B158DRAFT_0229 0.66 +0.9
234,231 - B158DRAFT_0229 0.73 -1.6
234,231 - B158DRAFT_0229 0.73 +0.8
234,231 - B158DRAFT_0229 0.73 -0.2
234,236 - B158DRAFT_0229 0.73 +0.7
234,241 - B158DRAFT_0229 0.74 -1.3
234,264 - B158DRAFT_0229 0.76 -0.5
234,314 + B158DRAFT_0229 0.80 -0.7
234,314 + B158DRAFT_0229 0.80 -1.7
234,314 + B158DRAFT_0229 0.80 -1.1
234,322 - B158DRAFT_0229 0.81 +0.5
234,322 - B158DRAFT_0229 0.81 +0.1
234,322 - B158DRAFT_0229 0.81 -1.1
234,322 - B158DRAFT_0229 0.81 -0.4
234,322 - B158DRAFT_0229 0.81 -0.3
234,322 - B158DRAFT_0229 0.81 -1.0
234,327 - B158DRAFT_0229 0.81 +0.2
234,345 + B158DRAFT_0229 0.83 -3.3
234,345 + B158DRAFT_0229 0.83 -0.2
234,357 + B158DRAFT_0229 0.84 -2.3
234,357 + B158DRAFT_0229 0.84 +1.7
234,357 + B158DRAFT_0229 0.84 -1.8
234,586 + -0.2
234,604 - -0.5
234,604 - -1.1
234,604 - -1.8
234,754 + B158DRAFT_0230 0.12 +2.3
234,764 + B158DRAFT_0230 0.14 -1.1
234,804 + B158DRAFT_0230 0.19 -2.8
234,812 - B158DRAFT_0230 0.20 -1.3
234,812 - B158DRAFT_0230 0.20 -1.2
234,862 + B158DRAFT_0230 0.27 -1.0
234,877 + B158DRAFT_0230 0.29 -1.2
234,885 - B158DRAFT_0230 0.30 -0.9
234,885 - B158DRAFT_0230 0.30 -1.5
234,973 + B158DRAFT_0230 0.42 +2.5
235,068 + B158DRAFT_0230 0.55 +0.5
235,068 + B158DRAFT_0230 0.55 -2.1
235,068 + B158DRAFT_0230 0.55 +0.2
235,068 + B158DRAFT_0230 0.55 +5.4
235,068 + B158DRAFT_0230 0.55 +0.6
235,068 + B158DRAFT_0230 0.55 +0.1
235,076 - B158DRAFT_0230 0.56 +0.5
235,076 - B158DRAFT_0230 0.56 -0.4
235,076 - B158DRAFT_0230 0.56 -0.6
235,076 - B158DRAFT_0230 0.56 -2.6
235,076 - B158DRAFT_0230 0.56 +0.4
235,076 - B158DRAFT_0230 0.56 +0.7
235,076 - B158DRAFT_0230 0.56 -1.9
235,114 + B158DRAFT_0230 0.62 -0.1
235,125 + B158DRAFT_0230 0.63 -1.4
235,125 + B158DRAFT_0230 0.63 +0.7
235,125 + B158DRAFT_0230 0.63 -2.0
235,133 - B158DRAFT_0230 0.64 +0.3
235,133 - B158DRAFT_0230 0.64 +0.5
235,133 - B158DRAFT_0230 0.64 -1.1
235,142 + B158DRAFT_0230 0.65 -0.9
235,233 - B158DRAFT_0230 0.78 +0.9
235,238 - B158DRAFT_0230 0.79 -1.9
235,321 + -1.0
235,339 - -2.4
235,352 + -1.5
235,358 - -2.2
235,511 + -2.0
235,516 + -0.7
235,519 - -1.7
235,674 + B158DRAFT_0231 0.28 +0.3
235,679 + B158DRAFT_0231 0.29 +2.4
235,744 + B158DRAFT_0231 0.37 -1.6
235,752 - B158DRAFT_0231 0.38 +0.7
235,764 + B158DRAFT_0231 0.40 -2.1
235,779 - B158DRAFT_0231 0.42 +0.9
235,779 - B158DRAFT_0231 0.42 +0.7
235,783 + B158DRAFT_0231 0.42 -0.5
235,786 - B158DRAFT_0231 0.42 +2.3
235,791 - B158DRAFT_0231 0.43 +0.5
235,791 - B158DRAFT_0231 0.43 -0.5
235,880 + B158DRAFT_0231 0.54 -1.4
235,880 + B158DRAFT_0231 0.54 -4.4
235,931 - B158DRAFT_0231 0.61 +0.4
235,937 - B158DRAFT_0231 0.62 -0.0
235,991 - B158DRAFT_0231 0.68 -1.6
236,025 + B158DRAFT_0231 0.73 -0.1
236,025 + B158DRAFT_0231 0.73 -1.5
236,025 + B158DRAFT_0231 0.73 -0.4
236,025 + B158DRAFT_0231 0.73 -2.2
236,025 + B158DRAFT_0231 0.73 -2.4
236,031 - B158DRAFT_0231 0.74 -0.8
236,033 - B158DRAFT_0231 0.74 -1.1
236,033 - B158DRAFT_0231 0.74 +0.1
236,033 - B158DRAFT_0231 0.74 +1.0
236,033 - B158DRAFT_0231 0.74 -0.5
236,033 - B158DRAFT_0231 0.74 -0.3
236,033 - B158DRAFT_0231 0.74 +0.9
236,033 - B158DRAFT_0231 0.74 -2.6
236,053 + B158DRAFT_0231 0.76 -0.9
236,053 + B158DRAFT_0231 0.76 -1.3
236,061 - B158DRAFT_0231 0.77 +0.6
236,150 + B158DRAFT_0231 0.89 -1.0
236,171 - -1.4
236,191 + -2.1
236,191 + +4.6
236,193 + -0.9
236,199 - +0.1
236,204 - +1.8
236,222 - +0.4
236,308 - +0.9

Or see this region's nucleotide sequence